Enterobacter sp. E20: NI40_006385
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Entry
NI40_006385 CDS
T04118
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
enx
Enterobacter sp. E20
Pathway
enx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NI40_006385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enx03019
]
NI40_006385
Enzymes [BR:
enx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NI40_006385
Messenger RNA biogenesis [BR:
enx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NI40_006385
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
DUF6482
Motif
Other DBs
NCBI-ProteinID:
ALL16794
LinkDB
All DBs
Position
1369841..1371226
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AA seq
461 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGGRGQGGGGRGQQPRRAEGGAPKSSG
KPPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tatgttgagccaaccccaatccagcagcaggcgatccccgccgttctgcagggccgtgac
ctgatggcgagcgcccagaccggtaccggcaaaactgcgggctttaccctgccgctgctg
gaactgctggtaaaaaaccagccgcacgccaaaggccgtcgtcctgtccgcgccctgatc
ctgaccccaacccgcgagctggcggcgcagattggtgagaacgtgcgtgactatagccgc
tatctcaacattcgttcgctggtggttttcggcggggtaagcatcaacccgcagatgatg
aagctgcgcagcggcgtcgacgttctggttgcgactccaggtcgcctgctggatctggag
caccagaatgcggtgaagctggaccaggttgaaattctggtgctggacgaagccgaccgc
atgctcgacatgggctttatccacgatattcgtcgcgtgctggccaagctgcctgcgcgt
cgtcagaacctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtggcgcgccgcaacaccgcctccgagcaggtg
acgcagcacgttcactttgtggataaaaagcgcaagcgggaactgctctcccagatgatc
ggccagggcaactggcagcaggtgctggtctttacccgcaccaagcacggcgccaaccac
ctggcggaacagctgaacaaagacggcattcgcagtgcggcgatccacggcaacaagagc
cagggcgcgcgtacccgtgcgctggctgagttcaaatccggcgacatccgcgtgctggtg
gcgaccgacatcgccgcccgtggccttgacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattacgttcaccgtatcggccgtaccggccgcgcggcg
gcaaccggtgaagcgctctctctggtctgcgtggacgagcacaagctgctgcgcgacatc
gagcgcctcctgaagaaagagatcccgcgcatcgaaaccccgggttacgaagtggacccg
tcgatcaaagccgagccgattcagaacggtcgtcagggcggcggtggacgtggtcagggc
ggcggcggtcgcggtcagcagccgcgtcgtgccgaaggcggcgcgccgaaatcatccggc
aaaccgccgcgtcgtaacaacgacagcaaaccggcgggtgaaaacccgtggcgcagcggc
gaggggaaaccggcaggagaagggcagcgtcgacgccgcccgcgcaagcctgctaacccg
cagtaa
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