Enterobacter sp. E20: NI40_010735
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Entry
NI40_010735 CDS
T04118
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
enx
Enterobacter sp. E20
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enx03019
]
NI40_010735
Enzymes [BR:
enx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NI40_010735
Messenger RNA biogenesis [BR:
enx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NI40_010735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
T2SSE
nSTAND3
NACHT
ResIII
AAA_16
PhoH
SLFN-g3_helicase
AAA_23
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ALL17611
LinkDB
All DBs
Position
2259323..2263225
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKLTFPMLLQQLDSLMLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPAITYPENLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGNESAGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQPHGGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATVYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAEKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDEALFEFYDQRISHDVISARHFDSWWKKASKETPDLLNFEKSMLIKEGA
ESVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDEGGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDREDW
NWDQVPDHLKISFRVVDDKNKKLLEGRSLSELKESLKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWTEEGFAQLHEK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPARRDDED
VQAIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaattaaccttcccgatgctcctgcaacagcttgattctctgatg
ctgcgcgataaacagcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggagatggcgaaagagattgaacaggcggcagggaaa
gttgtgctgcgcgaagccgcacgtccggcaattacctacccggaaaacctgcccgtcagc
cagaaaaaacaggacatccttgaggccgtccgcgaccaccaggtggtgattgttgcgggg
gaaaccggctcggggaaaaccacccagctgccgaaaatctgtatggagctgggacgcggg
ctaaaagggctgataggccacacccagccgcgtcgactggcggcacgcaccgtggcgaac
cgtattgccgaagagctgcagacggagccgggcggctgcatcggttacaaggtgcgattc
agcgaccacgttagcgataacaccatggtcaagctgatgaccgacggtattctgctggcg
gaaatccagcaggatcgcctgctgatgcagtacgacaccattatcattgacgaagcgcac
gagcgcagcctgaacatcgacttcctgctcggctacctgaaagagctgctgccgcgtcgc
ccggatctgaaaatcatcatcacctccgcgaccatcgaccctgagcgcttctcaaagcat
ttcaacaatgcgccgattatcgaggtgtcaggacgcacgtatccggtggaagtgcgctat
cgcccgattgttgaagaggcggacgataccgagcgcgaccagctgcaggccatcttcgac
gccgttgacgagctgggcaacgaaagcgcgggcgacattctgatcttcatgagcggcgag
cgcgaaatccgcgacaccgccgatgcgctcagcaagcgcgacctgcgccacacggagatc
ctgccgctttacgcgcgcctgtcaaacagcgagcagaaccgcgtattccagccgcacggc
gggcgacgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtaccggggatc
aaatacgtgatcgacccgggcacggcgcgaatcagccgctacagctaccgcacgaaggtc
cagcggctgccgattgagccggtctcccaggcgtccgcgaaccagcgtaagggccgctgc
ggccgcgtgtcggaagggatctgtattcgtctctattccgaagatgatttcctgtcgcgc
ccggagtttaccgacccggaaattctgcgcaccaacctggcgtccgttatcctgcagatg
accgcgctggggctgggcgacatcgcggcgttcccgttcgtcgaagcgccggataaacgc
aacattcaggacggcgtgcgtctgctggaagagctcggcgccattaccaccgacgagcag
gcgacggtctacaagctaacgccgctgggccgccagctcagccagctgccggtggatccg
cgcctggcccgtatggtgctggaagcgcaaaagcacggctgcgtgcgcgaggcgatgatc
attacctcggcgctctccattcaggatccgcgcgagcgtccgatggacaagcagcaggcg
tctgacgaaaagcaccgtcgcttccacgacaaagagtccgacttcctcgccttcgtgaac
ctgtggaactatctcggcgagcagcagaaagcgctctcctcgaaccagttccgccgccag
tgccgcgtggatttcctcaactacctgcgcgtgcgcgagtggcaggatatctacacccag
ctgcgccaggtggtgaaagagctgggcattccggtcaacagcgagccggcggagtaccgc
gagattcatatcgcgctgctgaccggcctgctgtcccacattgggatgaaggacgccgaa
aagcaggaatataccggcgcgcgcaacgcccgtttctccatcttccccggttccggcctg
ttcaagaagccgccgaagtggaccatggtcgccgagctggtggaaaccagccgcctgtgg
ggacgcattgccgcgcgtatcgatccggaatgggtggagccggtggcgcagcacctgctg
aaacgctcgtacagcgagccgcactgggagcgcgcgcagggcgcggtgatggcgaccgag
aaggtgaccgtttacggcctgccggtggtcgccgcgcgtaaggtcaactacagccagatt
gacccggcgctcagccgcgagctgtttatccgccacgcgctggtggagggagactggcaa
acgcgccacgccttcttccgcgaaaacctgaagctgcgcgcggaagtggaggagcttgag
cacaagtcccgccgccgcgacattctggtggacgacgaggcgctgtttgagttttacgac
cagcgcatcagccacgatgttatctccgcccgccacttcgacagctggtggaagaaggcc
agcaaagagacgccggacctgctcaactttgaaaagagcatgctgattaaagagggggcg
gagtcggtcagcaagctcgactacccgaacttctggcatcagggcaacctcaagctgcgt
ctgacgtatcagtttgaaccgggtgccgacgcggacggcgtgaccgttcatattccgctg
ccgctgttaaaccaggtcgatgagggcgggtttgagtggcaaatccccggcctgcgccgc
gagctggtgattgcgctgatcaaatctctgccgaaaccggtgcgccgtaactttgtgcct
gcgccaaactatgcggaagcgtttttaggccgcgtcacgccgctggagctgccgctgctg
gacgcgctggagcgtgagttccgacgcatgaccggcaccaccatcgaccgcgaagactgg
aactgggatcaggtgcccgatcacctgaaaatcagcttccgcgtggtggatgataaaaac
aaaaagctgctggaaggacgttcgctgagcgagctgaaagagtcgctgaaagggaaagtt
caggagacgctttctgcggtggcggacgacggtatcgagcagagcgggctgcatatctgg
agctttggtcagcttccggaaagctacgaacagaagcgcggtaactataaggtcaaggcc
tggcctgcgctggtggacgagcgcgacagcgtggcgatcaaactgtttgataatccgcag
gaacagcagcagatgatgtggcgcgggctgcgtcgcctgctgctgctgaacatcccgtcg
ccgattaagtatctgcacgagaagctgccgaacaaagccaagctcgggctgtactttaac
ccgtacggcaaggtgctggatctgattgacgactgcatctcctgcggcgtggacaagctg
atccacgaggcgggcggtccggtctggacggaagagggctttgctcagcttcatgaaaag
gtgcgcgccgagctgaacgacaccgtggtggagatagccaaacaggtcgagcagatcctc
accgccgtgttcaatatcaacaagcgcctgaaggggcgcgtggatatgaccatggcgctg
gggctgtcggacgtgaaggcgcagatggcggggctggtctatcgcggcttcgtcaccggc
aacggctttaagcgtctgggcgatacgctgcgctatctgcaggcgattgaaaaacgtctg
gaaaaaatggctatcgacccgcaccgcgatcgcgcgcagatgctgaaagtggagagcgtg
cagcaggcgtggcagcagtggctaaacaagctgccgccggcgcgccgcgacgatgaagac
gtgcaggcgatccgctggatgatcgaggagctgcgcgtcagcttctttgcccagcagctc
ggtacgccgtatccgatttcggataagcgtattctgcaggcgatggagcagatttccgct
taa
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