Enterobacter sp. E20: NI40_012575
Help
Entry
NI40_012575 CDS
T04118
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
enx
Enterobacter sp. E20
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enx03016
]
NI40_012575
Enzymes [BR:
enx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NI40_012575
Transfer RNA biogenesis [BR:
enx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NI40_012575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
ALL17967
LinkDB
All DBs
Position
2684839..2686773
Genome browser
AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
MAVIHTEKDRESAEPEELIEPFLTRFVGKVQRKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGADHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLTRRDLTALEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIAEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDAIAAQIRLLHRICLNRGEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMISANICAARVLRDRLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETIARPQEDTTLQMADRRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaggttgacgcg
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcatggcgatcgcgtc
atggccgtcattcataccgagaaggaccgcgagtctgccgagccggaagaactgatcgaa
ccgttcctgacccgttttgtgggtaaggtgcagagaaaagacgatcgtcttgctatcgtg
ccggatcatcccctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaaaggcgat
cgcggtttttatgctgagctgacccagttcatcacctttggcgccgaccactttgtgcca
tggtgggtcacgctggcacgccacaatcttgaaaaagaagcgccgaacggcgtagcgacc
gagatgcaggacgaaggtctgacgcgccgcgatctcaccgcgctggagtttgtcaccatc
gacagcgccagcacggaagatatggatgacgcgctgtacgctgaagagagcgccgatggc
aaactgcatcttaccgtcgccattgccgatccaaccgcctggattgccgaaggcagcaag
cttgatgacgcggcgaaaatccgtgccttcaccaactacctgccgggcttcaatattccg
atgctgccgcgcgaattgtcagacgatctctgctcgctgcgtccaaatgaagtgcgcccg
gtccttgcctgccgcatgactatcgccgcagatggcgcgattgaagacgatatcgagttc
tttgccgccaccatcgaatcgaaagccaagctggcctacgataacgtctccgactggctt
gaaaataccggtagctggaaacctgaatcagacgccattgccgcgcaaattcgtctgctg
catcgcatctgcctgaaccgcggcgagtggcgtaaaacccacgcgctggtgttcaaagac
cgcccggattatcgctttgttctgggcgagaaaggcgaagtgctggacatcgtggccgaa
ccgcgacgcattgcgaaccgcatcgttgaagaggcgatgatttccgccaacatctgcgcc
gcacgcgtgcttcgcgacaggctgggctttggcatttacaacgtccacaccgggtttgat
ccggcgaataccgaagcgctggcggccctgctgaagactcacgatgtgcacgttgatcct
gaagaagtgctgacgctgccgggcttctgcaagcttcgccgcgagctggacgcgcagccg
tcgggtttcctggacagccgcattcgtcgcttccagtccttcgctgaaatcagcaccgaa
cctggcccgcactttggtcttggcctcgaagcttacgccacctggacatcgccgatccgt
aagtatggcgatatggttaaccaccgcctgctgaaagcgattatcaaaggtgaaaccatt
gcccgtcctcaggaggacaccacgctgcagatggccgatcgtcgccgtctgaaccgcatg
gccgagcgtgacgttggtgactggctgtacgcacgcttcctgcaggataaagccggtacg
gacacccgtttcgccgcagagatcatcgatatcagccgcgggggcatgcgcgtccgtctg
gtcgataacggtgctgtcgcgtttattcctgcgccgttcctgcacgcggttcgtgacgaa
atggtctgtagccaggaaaacggtaccgtgcaaattaaaggtgaaacagtttacaaagtc
accgacgtgattgacgttactatcgccgaagttcgcatggaaacccgcagtattatcgcg
cgccctgtcgcctga
DBGET
integrated database retrieval system
