Enterobacter sp. E20: NI40_013375
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Entry
NI40_013375 CDS
T04118
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
enx
Enterobacter sp. E20
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enx03016
]
NI40_013375
Enzymes [BR:
enx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NI40_013375
Transfer RNA biogenesis [BR:
enx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NI40_013375
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Sfi1
Motif
Other DBs
NCBI-ProteinID:
ALL18112
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All DBs
Position
complement(2865596..2866750)
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AA seq
384 aa
AA seq
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MGANKREPVLNYQMITTNDELASLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLGITDWTPMRDLLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSN
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTERQLEYAAADVFYLLPIAGQLMKEAE
ASGWLAAALDECRMTQQRRQEVVDPKEAWRDITNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVAKAQELPEDALP
EPLLNLMDMPGYRKAFKDIKALVQAVATESKLSAELLASRRQINQLLNWHWKLKPQNGVP
EMMAGWRGELMADRLNTLLDGYPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagaacccgttttgaattaccagatgatcacgaccaacgacgag
ctggcttcgctgtgcgaagtgacgcgcgactttcctgccattgccctggataccgagttt
gtccgtacccgaacctattatccgcagctgggtttgattcagatgtatgacggtaaacac
gtgtcgctgattgacccgctcggcattaccgactggacgccgatgcgtgacctgctgctc
gataccgccgtgacgaaatacctgcacgcaggcagtgaggatctggaagtctttctgaac
acctttggcatcatgccccagccgctgattgacacgcagatcctcgcggcattcagcaat
cgtccgctctcatggggctttgctgccatggtggaggagtatacgggcctgacgctggat
aaaagcgaatcccgtaccgactggctggcgcgcccgcttaccgagcgtcagctggagtat
gcggcggcagacgtgttttacctgctgccgattgccggacagctgatgaaagaggcggaa
gcctccggctggctcgctgctgcgctggacgaatgccgtatgacccagcagcgtcgtcag
gaagtggttgacccgaaagaggcctggcgcgatatcaccaacgcctggcagctgcgcacg
cgtcaactggcatgcctgcagctgctggcagactggcgcttgcgtaaagcgcgcgagcgc
gatctggccgttaactttgtggttcgcgaagagcatctctgggcagtcgcgcgctatatg
ccgggcagcctgggggagctggacagcattggcctttcgggcagcgagatccgcttccac
ggtaaaaccctgctggcgctggtcgccaaagcgcaggagctgccggaagatgcgctgccg
gaaccgctgctgaacctgatggacatgccgggctatcgcaaagcgtttaaggatatcaaa
gcgctggtgcaggcagttgcaacggaaagcaagctgagcgcggaactgctcgcctcacgt
cgtcagattaaccagctgctgaactggcactggaagctgaagccgcagaatggcgtgccg
gagatgatggcgggatggcgcggggaattgatggccgatcgcctgaatacgctgctggac
ggttacccgcgataa
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