Enterobacter sp. E20: NI40_019080
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Entry
NI40_019080 CDS
T04118
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
enx
Enterobacter sp. E20
Pathway
enx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NI40_019080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enx03021
]
NI40_019080
Transcription machinery [BR:
enx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NI40_019080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ALL19164
LinkDB
All DBs
Position
4104609..4106456
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AA seq
615 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEESDDDTADDDNSIDPELAREKFAELRTQYEVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKDDVHRGLQKLHQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagatatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctctgttgccgagtacccg
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagcggaagaagcgcgcctg
tctgacctgatcaccggttttgtcgacccgaacgctgaagaagatatggcgcctaccgcc
actcacgtcggttctgaactgtctcaggaagagatggatgatgacgaagacgaagatgag
gaagagagcgacgacgacaccgcggacgatgacaacagcatcgacccggagctggcgcgt
gagaagtttgccgagctgcgtacccagtacgaagtgacgcgtgacaccatcaaagcgaaa
ggccgcagccatgccgccgctcaggaagagatcctgaagctgtctgaagtattcaaacag
ttccgcctggtgccaaaacagttcgactacctggtgaacagcatgcgcgtaatgatggat
cgcgtacgtacccaggaacgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccg
aagaagaacttcatcaccctcttcaccggcaacgaaaccagcgaaacctggttcaacgcg
gctatcgcaatgaacaagccgtggtctgaaaaactgcacgacgtgaaggacgatgtacat
cgcggcctgcagaaactgcatcagattgaagaagagaccggcctgaccatcgagcaggtt
aaagacatcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagag
atggttgaagcgaacttgcgtctggttatctctatcgccaagaaatacaccaaccgtggt
ctgcagttcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagataag
tttgaataccgtcgtggttacaagttctccacctacgcaacatggtggatccgtcaggct
atcacccgctctatcgcggatcaggcgcgcaccatccgtatcccggtgcatatgattgag
accatcaacaagctcaaccgtatctctcgccagatgctgcaggagatgggccgcgagccg
acgccggaagagctggccgagcgcatgctgatgccggaagacaagatccgtaaagtgctg
aagatcgccaaagagccaatctccatggaaacaccaatcggtgatgatgaagattcgcat
ctgggtgatttcatcgaggataccaccctcgagctgccgctggactctgccaccaccgag
agcctgcgcgctgcgacgcacgacgttctggctggcctgaccgcccgtgaagcaaaagtc
ctgcgtatgcgtttcggtattgatatgaacaccgaccacacgctggaagaagtgggtaaa
cagttcgacgttacccgtgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctg
cgtcatccaagccgctctgaagtactgcgtagcttcctggacgactaa
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