Enterobacter sp. E20: NI40_019600
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Entry
NI40_019600 CDS
T04118
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
enx
Enterobacter sp. E20
Pathway
enx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NI40_019600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enx03019
]
NI40_019600
03009 Ribosome biogenesis [BR:
enx03009
]
NI40_019600
Enzymes [BR:
enx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NI40_019600
Messenger RNA biogenesis [BR:
enx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NI40_019600
Ribosome biogenesis [BR:
enx03009
]
Prokaryotic type
rRNA helicases
NI40_019600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALL19260
LinkDB
All DBs
Position
complement(4204913..4206811)
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AA seq
632 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPRGDRPER
GGEDRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST
IELPKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRPDRGGERRGGGRSFGGERREGGRS
EGRGGEGRRFSGERRENRGPRRDEGTSRRRDA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtactctggacctctctaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgtcgaaaccatcatggcgcagatcccggacggt
catcagaccgcgctgttctctgccaccatgccagaagcgattcgtcgtatcactaagcgc
ttcatgaaagatcctcaggaagtgcgtattcagtccagcgttaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgcaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctataacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgaacgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgcgggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagctgacctgccaaatgcagatctgctgggc
aaacgccgcctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gaccagtaccgtgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcgccgatgcgtcctaagcgtgaattccgtgatcgtgacgatcgcttcgaa
cgtcgtggcgaccgtaatgaccgcaatgaccgtggcccacgtggtgaccgtccagagcgt
ggtggtgaagatcgtccacgtcgtgaacgtcgtgacgcgggtgatatggaactgtaccgc
attgaagtgggccgtgatgatggcgttgaagttcgtcacatcgttggcgcgatcgctaac
gaaggcgacatcagcagccgttacattggtaacatcaagctgttcgcatcccactctacc
atcgagctgccaaaaggcatgccgggcgaagtgctgcagcactttacgcgtacccgcatc
ctgaacaagccgatgaacatgcagctgatgggcgatgcacagccacgccctgaccgcggt
ggtgagcgtcgtggcggtggtcgcagcttcggtggcgagcgtcgtgaaggcggccgcagc
gaaggtcgcggtggtgaaggtcgtcgtttctccggcgagcgtcgcgaaaaccgcggccca
cgtcgtgacgaaggcaccagccgtcgccgtgacgcgtaa
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