Enterobacter sp. E20: NI40_019620
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Entry
NI40_019620 CDS
T04118
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
enx
Enterobacter sp. E20
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enx03016
]
NI40_019620 (truB)
Enzymes [BR:
enx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NI40_019620 (truB)
Transfer RNA biogenesis [BR:
enx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NI40_019620 (truB)
Prokaryotic type
NI40_019620 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALL19264
LinkDB
All DBs
Position
complement(4210790..4211740)
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AA seq
316 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPVCLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPVTFSAEQLDAALESFRGDSM
QVPSMYSALKYQGKKLYEYARQGIDVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEYLRELVEQAEAQGIAPADLLDPL
LMPMDSPAADFPVVNLPLTSSVYFKNGNPVRTAEAPLEGLVRVTEGDEGKFIGMGEMDGE
GRVAPRRLVVEYPVDA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcatggtgtgctgctgctggataaaccc
cagggcgcttccagcaacgacgtgctgcagaaagttaagcgtatttataacgccaaccgt
gcgggccacaccggcgcgctcgatccactggcaaccggcatgctgccggtctgcctggga
gaggcgacaaaattttcccagtacctgctcgactccgataagcgctaccgcgttatcgct
aaactgggccagcgcacggatacctccgacgcggatggccaggtggtggaagagcgtccg
gtgacgttcagcgcggagcagcttgatgctgcgctggagagcttccgtggggactcgatg
caggtgccgtcgatgtattcggcgctgaaatatcagggcaagaagctctacgaatatgcg
cgccagggcattgacgttccgcgtgaagcccgtccgataaccgtgtatgagctgctgttt
attcgccacgaaggtgatgaactggagctggaagtacactgttcgaaagggacctatatt
cgcactatcatcgacgacctcggtgaaaagctgggctgcggcgcgcatgtgatttacctg
cgccgcctggcggtgagcaagtacccggtggagcggatggtgaccctggaatatctgcgc
gagctggtagaacaggcggaagcgcaggggattgcgccggcagatttgctggatcctttg
ctgatgccgatggacagtccggcagctgacttcccggttgttaatcttcctttaacatcg
tccgtttactttaagaacggcaacccggttcgtacggcggaagcgccgctggaaggactg
gtacgcgtgaccgaaggtgacgaagggaaattcatcggtatgggcgaaatggatggcgaa
gggcgcgttgcgccgcgtcgtctggtcgtcgaatatccggtcgacgcgtga
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