Enterobacter sp. E20: NI40_021470
Help
Entry
NI40_021470 CDS
T04118
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
enx
Enterobacter sp. E20
Pathway
enx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NI40_021470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enx03019
]
NI40_021470
Enzymes [BR:
enx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NI40_021470
Messenger RNA biogenesis [BR:
enx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NI40_021470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALL19600
LinkDB
All DBs
Position
4587937..4589205
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgcgctgcacccgaaggtg
attgaagcccttgaaaataaagggtttcataactgcacgcccattcaggccctcgcgctg
ccgctgacgctggccggtcgcgatgttgccgggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggcaccgacgcgagaactggcggtacagatc
cacgcagacgctgaacccctggcgcagtctaccggactgaagcttggcctggcctatggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggtgtggatatcctgatcggt
accaccggccgtcttatcgattacgccaaacagaaccacattaacctcggcgcaatccag
gttgtggtgctcgatgaagctgaccgcatgtacgatctgggcttcattaaagacattcgc
tggctgttccgccgcatgccgccggccaatcagcgtctgaacatgctgttctccgctacc
ctttcttatcgcgtacgcgagctggcgttcgaacagatgaacaacgccgaatatgtcgaa
gtggaaccggagcagaaaacgggtcaccgcattaaagaagagctcttctacccttcaaat
gaagagaaaatgcgtctgctgcaaacgctgatcgaagaagagtggccagatcgcgccatt
atcttcgcgaacaccaaacaccgttgtgaagacatctggggccatctggctgcagacggt
caccgtgttggcctgttgaccggcgacgtggcgcagaaaaaacgcctgcgtattctggaa
gagtttacccgtggcgatctcgatattctggtcgcaaccgacgttgccgctcgtggtctg
cacattccggccgtgacgcacgtctttaactacgatctgccagacgactgcgaagactac
gtacaccgtatcggtcgtaccggtcgtgcgggcgcaagcggtcactcgattagcctggcg
tgtgaagagtatgcgctgaatctcccggccattgagacgtatatcggtcactctatcccg
cagagcaaatacaatccggaagcgttgttaagcgaactgccgccgcctaagcgtctaacc
cgcccacgctccggcaatggtccgcgtcgttcaggtggcgcgccgcgtaatcgtcgtcgt
tcaggttaa
DBGET
integrated database retrieval system
