Eucyclogobius newberryi (tidewater goby): 140346632
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Entry
140346632 CDS
T10929
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03030
DNA replication
eny03410
Base excision repair
eny03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140346632 (pole)
03410 Base excision repair
140346632 (pole)
03420 Nucleotide excision repair
140346632 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eny03032
]
140346632 (pole)
03400 DNA repair and recombination proteins [BR:
eny03400
]
140346632 (pole)
Enzymes [BR:
eny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140346632 (pole)
DNA replication proteins [BR:
eny03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
140346632 (pole)
DNA repair and recombination proteins [BR:
eny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
140346632 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
GARP
CENP-B_dimeris
APP_N
Motif
Other DBs
NCBI-GeneID:
140346632
NCBI-ProteinID:
XP_072288886
LinkDB
All DBs
Position
Unknown
AA seq
2285 aa
AA seq
DB search
MVLQNSGRFKSDRGGQSGGDQENQDDGSSALKRLENSQFTDEMDSRFGFDRFQEPGEKTG
WLINMHPAEILDEDKRLVSAVDFYFIQEDGSRFKIPLPFKPYFYVATKKNCEREVISYLS
KKFQGKVSKLEMVPKEDLELPNHLVGLKRNYIKLAFNTMDDLNKVKREIAPAVRKNREKE
QSNDEYTSMLSSALSGGNVMSVDEEAMAKSISEQLDNIIDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGSSYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSDNIEDFEFTPKPEYEGPFTVFNEDDEVALLKRWFDHVQETKPNIFV
TYNGDYFDWPFVETRATIHGLSMHKEIGFQKDSQGEYRSSQAIHMDCLKWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDAGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPSAFDFLYQRVERTMRHAIEEEEKIPLDQVTNFNEVC
DDIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ATCQRKMTWKWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHSLNREEQAKHEK
KRLADYCKKAYKKVHVTRLEERVTTICQRENSFYVDTVRAFRDRRYDFKGLHKVWKKKLS
AAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGA
NIITRARELIEQIGRPLELDTDGIWCVLPNTFPENFVVRTSNEKKSKVTISYPGAMLNIL
VKEGFTNDQYHELVDPVSLTYNIKAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLSCRFVI
SRKPEGSPVTERAIPLAIFQAESSVRKHFLKKWLKMPSLHDLDIRSIVDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQVP
IKGQTSDIEDFGMPKPLQPAILISTKRKRASQGEDSQGGSQDLVLTQSWREILGPPPPMG
SSKEQHLVWLRYHKKKWELQLRQRKERKKKRRLLDGEVQPTGGGVIRDGPATGLGSFLRR
TARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGTTY
KKVNRMLPRSNLVYYLYEYTVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKHIVRDLAGREADTYELEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGQKALFG
LFIPSQRKASIFILDTVRSNQMPSLNNLYSTERTALLEKTTDDLLPPEKHNFEVRAESDI
KAIYRALQRILLNYKEERRGPTLIAVHSNWELRRLAAGMSVLEEFPVVPVHVIDEINYNV
LDWQRHGARRMIRLYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKHN
HLLWLSPTSRPDLGGKEADDSRLVMENDERSSLEINAQGCYSTVCVELDLQSLAVNTILQ
SQHVNDMEGGASLGVSFDVIQQSSLEDMMTGNQGTTALASYDETALCSNTFRILKSMVVG
WVREITQYQNVYADNQVMHFYRWLRSPSSLLYDPALHRTLQNMIKKVFLQLIAEFKRLGS
TVVYGNFNRIILCTKKRRIDDAIGYIDYITNSIHSREIFHSLSISFARCWEFLMWMDPAN
YGGIKGKLPSSVLYGEGGANQTKAENPGEDDSEEEEEAKEEDRDGEADEVEDLIESNWNI
MQYLPQTCQKYFLMIVSAYIAAVYHSMKEEIRRNTPGATPIKRRGGSQVTQQTIGDLSAL
PGIISFSQEYVSGELTQNIFTITQKIQKKVTGTRSVSQPSEMFPVLPGSYLPLNNPALEF
IKYVCQVLSLDPNISNQMNKLKRDLLRLVDVGEFSDDAQFRDPCQSYMLPEVICHHCNFC
RDLDLCKDPSITQDGSVLPQWFCSNCQAQYESEAIEMSLVEALQKKLMSFTLQDLVCSKC
KGVKEANMPLYCSCAGDFELTFSTKNFSEQITVFQNIASHYNMSFLGETIEWLLAMSPHL
SQKTL
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccaaaacagtggacgatttaaaagtgaccgaggaggacaaagtggaggagat
caagaaaaccaggatgatggctcgtcagctctcaagagactggagaacagccagtttaca
gatgagatggactctcgttttgggtttgacagattccaagaaccaggagagaagactggc
tggcttattaacatgcacccagctgagattctggatgaagacaaacggctagttagtgct
gtagacttttatttcattcaagaagatggcagcaggttcaagattccccttcctttcaaa
ccatatttttatgtagcaacaaaaaagaattgtgagagggaagtgatatcttacctgtca
aagaagtttcaaggaaaagtgtcaaagcttgaaatggtccccaaagaagacctagaactg
ccaaaccacttggttgggcttaaaagaaactacatcaagcttgccttcaacacaatggat
gaccttaacaaagtaaaacgggagattgcacctgcagtacgtaaaaacagagagaaagag
cagtccaatgatgaatacacctccatgttatcaagtgccttatcaggtggcaatgtgatg
tcggttgatgaagaagcaatggccaaaagtatttcagaacaactggacaacattatagat
atgcgagagtatgatgtgccctaccatgtgcgtgtgtcaattgacttgaagatccatgtg
gcgcactggtacaatgtccgatacagaggtagctcctacccccccgagattgtacgaaga
gatgaccttgttgagcggccagaccctgttgttttagcatttgacatagagaccaccaaa
cttccgctgaaatttccagatgcagagactgatcaaatcatgatgatttcatatatgatt
gatggtcaaggatttcttatcacaaaccgagagattgtctcagacaatatagaagacttc
gaattcactcctaaaccagaatatgaaggtccctttactgtgttcaatgaagatgacgag
gttgcccttcttaaacgctggtttgatcacgttcaagaaacaaaaccaaatatttttgtg
acctacaatggagactattttgattggccttttgtggaaacacgtgcaaccattcatgga
ctgagcatgcacaaagagattggttttcagaaagatagccaaggggaatacaggtccagt
caggccattcacatggactgcttaaaatgggtaaaaagagacagttacttgccagttgga
agtcataatctgaaggcagcagccaaggctaaactgagctatgatcctgtcgagttggat
ccggaggagatgtgccgcatggcaactgaggagcctcagacattagccacttactctgtc
tctgatgcagtggccacttactacctctacatgaaatatgttcacccgtttatctttgct
ttgtgcacaatcattccaatggaaccagatgaggtgctgcgtaagggttctggtacactg
tgtgaggctttgttgatggtccaagccttccatgcaaatatcatcttcccgaacaaacaa
gagcaagtgtttaacaagctgactgatgctggccatgtgttggactcagagacttatgtg
ggcggtcacgtggaggcgcttgagtctggagttttccgcagtgacattccctgtcgcttt
aaaatgaacccatcagcttttgacttcttgtatcagagggttgagcgcacaatgcgtcat
gccattgaagaggaagagaagattcctttggaccaggttacaaactttaatgaggtgtgt
gatgatataaaaaagaagttgatatcccttaaagaggttcctaataggattgagtgccct
cttatttaccatctggacgttggtgccatgtatcccaatattattttaaccaaccgcctc
cagccgtctgcaatggttgatgaggcgacttgtgctgcttgtgacttcaataaacctgga
gccacttgtcaaaggaagatgacctggaaatggagaggggaaataatgcctgccagccgc
agtgaattccaccgtattcagcagcagctggagtctgagaagtttcctccattttttccc
aatggccctcctcgagcatttcactcactaaaccgagaggaacaggctaaacacgagaag
aaacgactggcagattattgtaaaaaggcctacaagaaggtacatgttactagactggag
gagcgagtcaccactatctgtcaaagagagaactccttctacgttgatacagtgagagcc
ttcagagatcggcgatatgatttcaaaggactccacaaggtgtggaagaaaaagctgtca
gccgcccaggacagtggtgatgctgctgaggtgaagcgctgtaagaacatggagattctg
tacgagtctctgcagctggcccacaagtgtattctcaactctttctatggatatgtaatg
aggaaaggggcacgctggtactccatggagatggctggcattgtgtgtcatactggagcc
aacatcatcacacgggccagagagctcatcgaacaaatagggagacctcttgagttggac
acggatggtatctggtgtgtccttccaaacacttttccagagaactttgtagtgaggaca
agcaatgagaaaaagtccaaggtgacgatctcctatcctggcgccatgctgaatatcttg
gtaaaggaaggtttcactaatgaccagtaccatgaactggttgacccagtgtctctcaca
tacaacattaaagcagagaatagtatcttctttgaagtggatggaccatatctggccatg
attttgcctgcctctaaagaagaaggcaaaaagctgaagaaaaggtacgctgtgtttaat
gaagatggctctttggctgagctcaaaggttttgaagtgaaaagaagaggagaattacag
ctcattaagatctttcagtcatccgtttttgaggctttcctcaaagggacaactctggat
gaggtttatgcctctgtggctaaagtggcagattactggctggatgtactctacagcaag
gctgctaatatgccagacgcagagctgtttgaactgatttctgagaatcgatccatgtcc
aaaaagctggaggactacggaggacagaagtcaacttctattagcactgcaaaaagactg
gctgagtttcttggagatcaaatggtgaaagatgctggcttgagctgcagatttgttatt
tctcgaaagcctgaaggatcacctgttacagagagagcgattcctttagccatcttccaa
gcggaatccagtgtgaggaaacattttcttaaaaaatggttaaaaatgccaagcctacat
gaccttgacattcgctcgattgttgactggagttactacatagaaaggttgggtagtgct
attcagaaaatcatcacaatccctgcagctcttcaacaggtgaagaatcctgtaccgaga
gtcaggcatcctgactggcttcataagaagcttctggaaaaaaatgacatctacaagcaa
aagaaaattagtgagctatttacaagcgagggcaagagacaggtggctcatcaggttccc
atcaaaggacagactagtgacattgaggattttgggatgccaaaacccctgcagccagcc
attctcatcagcacaaagaggaagcgggcttcgcagggagaggacagccagggggggtct
caggacctggtgctcacacagtcctggagagagatactgggtcctcctccacccatggga
tcctcaaaggaacaacatctggtttggctgcgataccataagaaaaagtgggagctgcaa
ttgagacaaaggaaggagaggaagaagaagaggaggctgttggatggagaagttcagccg
acaggaggaggagtgatcagagatggacccgccactggactgggaagtttcctccgacga
accgcccgcagcatcttagacatgccctggcagattgtacagattgcagaaaccagtcac
cctggcctctataagctctgggcggtgatagggaatgaccttcactgcatgaagcttaac
atccctcgagttttttatgttaaccagaaagttccaaaacaggaggagggaaccacttat
aaaaaggtgaaccgcatgcttccacgctccaacctggtgtactacctttatgagtacact
gtgccagaggatatgtaccaggagcacatcaatgaaataaatgctgacctgtctgcacct
gatattgagggggtctatgaaacacaggtcccactgttgttccgggctttggtgcagctt
ggttgtgtttgcatggttaataagcatatagtgcgggacctggctggcagggaggctgac
acttatgaactcgagcatctggagatgagatctttggcacagttcagctaccttgaacca
gggagtgtccgtcatatgtacctgtatcatcacagccagggccaaaaggcactctttggt
ctcttcatcccatctcagcgcaaagccagtattttcatcctcgatacagttcgaagcaat
cagatgcccagcctgaataacttgtacagcaccgagcgcactgcactcttggagaaaacg
acagacgacctcctccctccagagaaacataactttgaggttcgagctgaaagtgacatc
aaggccatctatcgtgcattgcagcgcatattgttaaactacaaggaggaacgtcgggga
cccacactcattgcagttcattcaaactgggagttaaggcgcctggctgcagggatgtcc
gtgctggaggagttcccagttgttccagtccatgtcattgatgagatcaactataatgtc
ctcgactggcagaggcacggagcacgtcgcatgattcgcctctatctcaatctggacagc
tgtctgtcacaggcctttgacatggctagatattaccacttgccagtaggaaacctgcct
caggatatctctatatttgggtctgatttattcttggcaagacaccttcgaaagcataac
cacctgttgtggctttcacccacctcaaggccagatctgggcggtaaagaggctgacgac
agccgtcttgtcatggaaaatgatgaaaggagctctttagaaatcaatgctcaaggctgc
tactccacagtttgcgtggagcttgatctccaaagcttggcagttaacacaatcctccag
tcacaacatgtaaatgacatggagggtggggccagtcttggtgtaagttttgatgtgatc
cagcaatcatctttggaagacatgatgactggaaaccagggaacaactgcattggctagc
tatgatgaaacggcactttgctccaacacgttcaggatattgaagagcatggtggtagga
tgggtccgggagattacacagtaccagaatgtgtatgcagacaaccaggtcatgcacttc
tatcgatggctgcgctcccccagctctctgctctacgatcctgccctgcaccgcacactg
cagaacatgataaagaaggtcttcctccagttgattgctgagttcaaacgccttggttcc
actgtggtctatggaaatttcaaccgaattatcttatgcacaaaaaagcgaaggatagac
gatgccattggttacattgactacataacgaacagcatacactccagagaaatattccac
tcattgtctatttcatttgctcgatgttgggagtttttgatgtggatggacccagccaat
tatggaggcataaagggcaagttgccctctagtgtcttgtacggcgaggggggagctaat
cagaccaaagcagaaaacccaggagaagatgacagtgaggaggaggaggaggctaaggag
gaggatcgagatggagaggcagatgaggttgaagatctgattgaaagtaactggaacata
atgcagtacctgcctcaaacctgtcagaaatattttctgatgattgtctctgcctatatt
gcagccgtgtatcacagcatgaaagaggagatcaggcgtaatactccaggagccacaccg
ataaaacggcgaggaggaagtcaggttacacagcaaaccattggggacttgagtgctctt
cctggaatcatttctttctctcaagaatatgtgtctggtgagctgactcagaacattttt
accatcactcaaaaaatccagaagaaggtgactggaaccagaagtgtgtcccagccgtca
gagatgttcccagtcctacctggttcttacctcccactgaataacccagctctggagttt
attaaatacgtctgccaagtgttgtcgttggatccaaacatctccaaccaaatgaataag
ctaaaaagagatctactgcgtcttgtggatgtgggagagttttctgatgacgcccagttc
cgggatccttgtcaatcctacatgctaccagaagtaatttgccatcactgcaacttctgt
cgagaccttgacctctgcaaggatccttctataacacaggatgggtcagtcttgcctcag
tggttttgctctaactgccaggctcagtacgagtctgaggccattgaaatgtccctggtt
gaagctctgcaaaagaaactcatgagcttcacactgcaagacctggtttgcagtaaatgt
aaaggagtgaaggaagccaacatgcctctatattgtagctgtgctggtgattttgaactc
actttctcaactaagaatttctcagagcagataacagtatttcagaatatcgcgtcccac
tacaacatgagcttcttgggagagaccattgaatggctgcttgctatgagtccacatttg
agtcaaaagactctctaa
DBGET
integrated database retrieval system
