Eucyclogobius newberryi (tidewater goby): 140347394
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Entry
140347394 CDS
T10929
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
140347394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eny04131
]
140347394
Membrane trafficking [BR:
eny04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140347394
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
140347394
RAVE complex
140347394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
PEP5_VPS11_N
Beta-prop_WDR19_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
140347394
NCBI-ProteinID:
XP_072289928
LinkDB
All DBs
Position
Unknown
AA seq
3054 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNFPFTTYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLRGGQIAASYGSIVCIFEPVYQPEHKDTLLTKLNCQWHKKGQFVLDSIVRNLAW
HPTGASLLTGSSCLQLWSNYKGSSEESEKVTLKESGWRCIWQNRTASPVYLMKFSPDGIF
FATAGQDDCLVKVWYSTSKWKFGVSCFFTPPDPDLSLEGELAFSFIYLAHPRSVTGFSWR
KTSKYMPRGSVCNVLLTCCKDSVCRQWAETLLPGDTLPSDPYNNHKGAQHRDTPSSRKND
GNGTAQGRSAQEPNLQESLHSSVYRDVIHPSITGCLPHDQNRHCNHRKGKNGTPHANALC
HFHIAASINPATDIPLLPSISSLSSDDEEPGGPFTVHWLNNKELQFTLAMEVFLQQHRGS
LEQQQELSNEDPEDEENFEESGGKSCDPEPESTELPLASVEHQVEVLLEEWNKAADMLYS
IHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPAGDAISLSHSMVMYASNKNV
DLALQHDRQRPPGSSLPQAKSALISYAGQSKAAPSSSLRFSIFTPNVLMISKHDDGSLNQ
WAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNALRTPDVDSIL
APPERGLRPNRLSLGAISQDPNAIYSELILWRVDPVGPLSLSGGVSELARINSLHSSAFS
HLAWLPTLIPSTCLGVYCNSPSACFVASDGHSLRLYQAVIEAKKLLSELSNSEISKYVGE
VFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGYGRTETNEESDSSQTGS
SRPLFSARFFLVVIELTGAGRSLLHMWHLCLNALSVSTEETVSEKGLSTASSTSNSQLNF
NFDSMSPSLTVKGKPATSNLQSACRLSLSSQRVYSQELDLPEGVEVVSVRPAAGHLSASC
SLPAGRVPYLLATSCSDGKVRFWSCNAVASETLSAEEQQYQWKEWPLQVEDELSNNSAIT
LPGSPIEVSCCHTGRIAVAYKQKTNSPLISTPHHGLNTLFTPPSLMSSPHPHYNSTHSVP
NLSIKHNLNALLSPSAPNCTMSSVHIGIFQCESTGGAQWNLEQTIVLDNVEPITASGIGH
ITSENITIPNGNMELSIPAENCNGWTGKSLVHLDWVSQENGSHVLTVGIGTKIFMYGSLS
SKPPELGLSSYGSKDQGLSQLVLLRTVNLVSSVEGTLPVPVSLSWVRDGILVLGMDCEMH
VYSQWQPPRPVQPCTFTVPDTDISSSVSSITSAVRLCPEEPTTTSFTPSLTLPKRTFSRS
MMSLAQKLSGKKTAYDLPVEMEDSGLFEAAHNLFPTLPQYHPFQLLELMDLGKVHRAKAI
LSHLVKCIAGEVVSLKDRDTNPEKRVRSRTISAGGSTARDMKIFRQSEKSSPDYTEISSV
PPLPLYALLAADEDTAQKPDNVGSVSGDSGHGSSHTDAYDELFHTPNLGDLDPLESSQEE
TGNKVIDLSQYSPTYFGPEHAQILSSHLLHSSLPGLTRMEQMSLMALADTIATTSTDLKH
CQGKNKGGETLDECGLKFLLAVRLHTFLSTSLPPAYRLQLRRQGLSTCHYAWAFHSDAEE
ELLNMLPALQKNEPTWPELRSMGVGWWLRSTNKLRRCIEKVAKATFQKNNDPLDAAIFYL
AMKKKAVVWGLYRSQRNPKMTEFFSHNFTEDRWRKAALKNAFSLLGKQRFQHSAAFFLLA
GSLKDAVEVCVEKLEDLQLALVISRLYESEFETASTYKKILQRRVVGQDKQIGGLLDPFL
RSMAYWVLEDYSRALDTLIEQPSSTNTESPQTVSSCNPDVFNFYTYLRTHPLLLRRHFGS
SDKAKVGLTAEGRRADSISLDERRLFFTAAYAHLQTGCPMLALEVLSKMPKVHKRSDKQG
QSSGSKEASEDWSQAAVNGYESDSCSNSHSDSLLSFDWSQPSLTLPDDPLDLKWDSDKEE
DEEEEESQNNNNSVLQEDTQDAGSSLLESVPGEESEDGSNFILPSDDILAAQLKFTACLK
IMTNELRTLSTGYELDGGKLRYQLYQWLEREVVALQQCCSYRPCLPEQSVQAQGLSSGHA
EEEQLGSPGCDTQRSRRHWLLSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQ
NETVTTPCSQPQFASIPLLVACTSNVKTVVANPFVYLTNLSHDILQTINALDSPPHPDVV
NNQIYVLHTLAASLSACIYQCLCDGQTYSHVDPFTGIVYESVLLSQKLTLRTVSVEESVQ
PNTCPAQWPGIASLIRLLTSAGEESQPGLSVLLCEILTAVYLSLFVHGMSTHSSNELYHI
MTHPLNSQLWVTVFGGGARTPVRDKTSSPARTPPTASPGIDGSERKSRRFRFLSSSRSGS
KEESSMEREGPPSPMFVPVVEREAASIFKEQFVPPELSIWDYFIAKPLLPTYENRIEYDS
EASEGSEDDDEDEDYKDVFDPNSPQREHSNNNSYSWCLMRLAMVQLVLVNLKSFYPIAGY
DLLDLPVASPLCHAVLKMLQRWEQVLQKRLELFGGPPSKYISTHLLDETPGPALLRHKAL
FEPTNTPFRSSRHSTLPVKRLWQFLVKQEEVQETFIRNIFTKKRDPNESIEDQTDLVKYS
GMDENGTNQAESDRAFPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSI
LATQIMTWIDDDDAEAKGVSGDEFLVVHARDDFAALHGTTPYTHSSPGTPINMPWLGGVQ
TGRGAAVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVT
RIRFSHQGNKFGIVDADGALSLWQTNTSGVAPKPYLTQQCHNKTANDFVFVGSSSLIATA
GLSTDNRNVCLWDTLVTPANSLVHAFCCHDSGATVLCVAPRQELLITGGRRGWVSVLELS
HRHQRQSFLAHDSPVKALALDPTEDCFISGSSEGNIKVWSLSAQTLLYAFPHEHARQSLF
RNLGTGVMQIEVGPANHVFSCGADGTMKLRLLPNRFDSARDNHGDLKSDVKFFI
NT seq
9165 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcatcaggtcctcactggtgccgtcaaccctggagacaactgcttctccgtg
ggcagtgtcaacaatttccccttcacgacctacgcgtccggatgtgacgtggtgattctg
ggcagtgactttgagcggctccagatcatcccaggggccaaacatgggaacatccaggtg
ggctgtgtggactgctctctgcgggggggccagattgcagcttcctatggaagtattgtc
tgcatctttgagccagtttatcagcccgagcacaaagacactctgctgactaagctaaat
tgccagtggcacaagaagggtcaatttgttttagattccattgtacgcaacttggcctgg
caccccacaggtgccagtctcttaacaggctcgagctgtcttcagttgtggtctaattat
aaaggatccagtgaagaaagtgaaaaagtaactttgaaggagtctggatggaggtgcatt
tggcagaacagaactgcttcaccggtctatttaatgaagttctcccctgatggaatcttt
tttgctactgctgggcaggacgactgcctggtaaaggtttggtacagcaccagtaagtgg
aagtttggagtgtcttgtttcttcacacctccagatccggacctcagtttggagggagag
ctggccttttccttcatctacctggcccatccccgctcagtcacaggcttctcgtggagg
aaaaccagcaaatatatgccacgtggttctgtctgtaatgtcttgctgacttgctgtaag
gacagtgtatgtcgacaatgggctgagacactgttaccaggcgacactcttccgtctgat
ccctataacaaccacaaaggcgcccaacacagggacacgccgagttctcggaaaaacgat
ggcaatgggacggcacaaggaagatcagcacaggaaccaaatctccaggagtctttgcat
tcaagtgtttaccgggatgtgatccacccttccataactggctgcctgccccacgaccag
aaccggcactgcaaccaccgcaagggcaaaaacgggacgccccacgccaacgcactgtgc
cactttcacatcgccgccagcatcaaccctgccacagacattcccttgcttccgtcaatc
tcgtccttatcctctgatgatgaggaacctggaggtccttttaccgtccactggttaaac
aacaaagagcttcaattcactttagcaatggaagtcttccttcagcagcaccggggcagc
ctggagcaacagcaagagttgtccaatgaagatcctgaagatgaggaaaattttgaagaa
agtggagggaaatcttgtgatccagagccagagtccacagagctgcctttagcgtcagtg
gagcatcaggtggaggtgctgttggaggagtggaacaaagcagctgacatgttgtatagc
atccaccccatggatggctctctgttggtctggcatgtggactggttagatgaataccag
ccaggcatgttcaggcaagctcaggtgtcttttgtatctcgtattccagtagcattccct
gcaggtgatgccatctcattgagccatagcatggtcatgtatgcctccaataaaaatgtg
gacttagctctccagcacgataggcaacgccctcctggcagctctctgcctcaggccaaa
tctgctctcattagttatgcaggacaaagtaaagctgcccccagcagcagcctccgcttc
agcatattcacccccaacgtcctgatgatctccaaacatgacgatggctccttgaaccag
tgggcagtgagctttgcagaggactctgccttttccactgtcctcagtgtgtcccataaa
tcacggtactgtggccaccgcttccatctcaatgacctggcctgtcactcagtgctgcct
ctgctcctcaccacctcacaccacaacgccttgagaactccagatgtggatagcattctg
gcccctccagaacgcggcctgcgaccaaaccgcctatcactgggagccatttcccaggat
cctaatgccatctacagtgagctcatcttatggagagtggaccctgtaggccctctgtct
ctgtcgggcggggtctctgagctggctcgcatcaattctctgcattcttcagcattctca
catctagcatggctgcccacactgatcccaagcacctgtttaggagtgtactgcaactct
cccagtgcctgttttgtggcaagtgatggtcattcacttcgactgtatcaggctgtcatt
gaagccaagaaacttttgagcgagctttccaactcagagatatcaaaatatgttggtgag
gtcttcaacatcattagccagcagtcaacagcaaaaccagggtgcatcattgaactggat
gctatcacggactttcagggtaaagagactcaactcctgcatgtctttgaggaagacctg
attctgggctatggacggactgagacaaatgaggaatcagattcctctcagacaggctct
agtcgtccactcttctctgctcggttcttcttggtggtgatagaattaacaggggcgggg
cgatcattgttgcatatgtggcatctctgtctcaatgctctatccgtcagtacggaggag
acagtttcagagaaaggcctttctacagcctcctctaccagcaactcccagttaaatttt
aattttgattcaatgagtccttcgctgactgtgaagggtaaaccagccacctctaacctg
cagagtgcatgtcgcctcagcctcagctcccagcgagtttacagccaagagctggatctg
cctgagggagtggaggtcgtcagtgtccgaccggcagcaggccacctcagtgcatcttgt
tcactgccagcggggcgtgttccttacctcctcgccacttcctgctcagatgggaaagtg
cgtttctggagctgtaacgctgtggcctctgagaccttgagcgcagaggagcagcagtac
cagtggaaggagtggcctctccaagtagaagacgaactttctaataacagcgcgatcact
ttaccaggttctcccatcgaggtcagctgctgtcacacagggcggatagctgtggcttac
aaacaaaagacaaattctcctctgatttcaacacctcatcacggtttaaacacacttttc
acccccccttctctgatgtcctctccccatcctcactataatagtactcactcggttcca
aacctttccatcaagcacaacctcaacgcccttctcagccccagcgcacccaactgcaca
atgtccagtgtccatatcgggatcttccagtgtgagtccactggtggagctcagtggaac
ctagaacagactatcgtgctggacaatgtggagcccataactgctagtggcattggccac
atcacatctgaaaacataactattccaaatggcaacatggaattgtccattcctgctgaa
aattgtaatggctggactggtaaaagcctggttcatttggactgggtttcacaggagaat
ggctcacatgttcttactgttggtatagggacaaagatcttcatgtatggaagtttatcg
agtaaacctccagagctgggcctctcatcttatggcagcaaggaccaaggcttatctcaa
ctggtactgcttcgaactgtgaatctggtgtcctctgttgagggaacgctgcctgttcct
gtgtcactgtcctgggtacgagatgggatcctggtcttgggcatggactgtgaaatgcat
gtgtactcacagtggcagccccctagaccagtgcagccctgtactttcactgtcccagac
acagacatcagcagcagtgtgtcctccatcacctctgctgtccgactgtgtcctgaggag
cctactacaacatcttttactccatctttgacccttcccaaaaggaccttttcaaggtca
atgatgagcttggcccagaaactcagtgggaagaaaacggcttacgatttacctgtagaa
atggaagactcgggactgtttgaagctgctcacaacctcttccccactctgccccagtac
cacccatttcaattactagaacttatggatttagggaaggttcaccgtgccaaagccatt
ctctcgcacctggtaaaatgcattgcaggagaggttgtgtctctgaaagaccgggacaca
aacccagagaaacgtgttcgctctagaacgatcagcgctggagggagcacagccagagac
atgaagatcttcaggcaaagtgagaagtcctctccagactacacagagatcagctctgtg
cctcctctgcctctgtatgctcttctggcagctgatgaggacacagcccagaaacctgat
aatgtgggcagtgtgagtggagacagcggtcacgggtccagccacacagacgcgtacgac
gagttgtttcacactcccaacttaggggacctggaccctctggagagtagccaagaggaa
accgggaacaaggtgatagacctatcccagtacagtccaacctactttgggccagagcat
gctcagattttatccagccacctccttcactccagtttgccaggacttactcgaatggag
cagatgtccctcatggcattggccgacaccatcgctaccacaagtacagacctcaaacac
tgtcagggcaagaacaaaggaggagagacgttggatgagtgtggactgaagttcttactg
gctgtcagactccatacattcctctcgacctccctcccacccgcgtacagactgcagctg
cgacgccaaggcctgtccacctgccattacgcgtgggcctttcactctgacgccgaggaa
gagctgctgaacatgctgcccgctctgcagaagaatgaacccacgtggcccgagctgcga
tccatgggagtgggctggtggctgcgcagcaccaacaagctgcgcagatgcatcgagaag
gttgccaaagctacgtttcagaaaaacaatgatccactggatgcagccattttctacctc
gctatgaaaaagaaggcagtcgtttggggcttatacagatctcagaggaatcccaaaatg
acagaatttttcagccacaatttcacagaagaccgatggagaaaagctgctctaaagaat
gccttttcgttattggggaagcagcggttccaacactctgccgccttcttccttctcgct
ggatccctcaaagacgcagtggaggtctgtgtggaaaaactggaagacttacaactggcg
ctggtgatctccagactgtatgaatccgagtttgagacggcgtccacctacaagaaaatc
ctccagagacgcgtggtagggcaagacaaacagattggaggcctcctggatccgtttttg
aggagcatggcttactgggtgctggaggactacagccgagctttggacactctgatcgag
cagccttccagcacaaatacagaaagtccccagaccgtctcctcatgtaacccagacgtc
ttcaacttctacacttacctccgtacgcaccctctgctcctccgacgacatttcggctcc
tcggacaaagccaaagtgggtctgactgcagagggccgtcgggcggactctattagcctt
gacgagcgaagactgtttttcaccgctgcgtacgctcaccttcaaaccggctgcccaatg
ctggccctggaagtcctctccaagatgcccaaagtgcataaacgatctgacaagcaaggg
caaagttcggggagtaaggaagcgtcggaggactggtctcaagccgctgtgaatggatat
gagtcggacagctgctccaacagccattcagattcactgttaagctttgattggagccag
ccttcgctcacactgcctgatgatcccctggacctcaaatgggacagcgataaagaagag
gatgaagaagaggaagaaagtcaaaacaacaacaacagtgtgctgcaggaggacacacag
gatgctggctcgtctttgttggagtcggtgcccggggaggagtccgaggacggcagtaac
ttcatcctaccgtctgatgacatactcgcggcgcagctgaagtttaccgcctgtttgaag
atcatgaccaatgagctcaggacgctttcaacaggttatgagctggacggagggaagctg
cggtatcagctgtaccagtggttagaacgagaggtggtggctctccaacagtgctgcagc
tacagaccctgcctcccagagcagagtgtccaggcgcagggcctcagctctgggcatgcg
gaggaggaacagctcggaagccctggttgtgacactcagaggagcagaaggcactggctg
ctgagtaaccagcccttactgcggatgttcctgagttactgtagtctgcacggctcccac
ggcggaggactggcctctgtgcggatggagctcatactactgcttcaggagtctcaccag
aatgagacggtgaccactccatgctcccagcctcagttcgcctccatccctcttcttgtg
gcctgcacgtccaacgttaaaacggtggtggctaatccttttgtgtatctcaccaacctt
agtcatgacattttacaaaccatcaacgctctggactccccgcctcatccggatgtcgtc
aataaccagatttatgtgctgcacactctggctgcctctctgtccgcctgcatctatcag
tgtttatgtgacggacaaacctacagccatgttgaccccttcactgggattgtgtatgag
agcgtgttgttgtcccagaagctgacccttcgaacagtcagcgtggaggagtctgttcaa
cccaacacctgtcctgctcagtggccaggaatcgcctctttaatccgcttgttgacctcg
gcgggagaggagagccagcccggcctctccgtgctgctctgcgagatcctcacagccgtg
tatctgagtctgtttgttcacggcatgtccactcactccagcaacgagctctaccacatc
atgacccacccgctcaacagccagctctgggtcaccgtgttcggaggaggagcgcggacc
ccggtgcgagacaaaaccagcagccccgccaggacccccccgactgcttctccaggtatc
gacggctccgagcggaagtccaggcgctttagattcctgtcgtcatcacgcagcggttca
aaagaagagtcttcaatggagagagaaggacctcccagccccatgttcgtgcctgtggtg
gagagggaagcagcatctatctttaaggagcagtttgtcccgccagagctcagcatttgg
gattatttcattgccaagccgttgttgccaacatacgaaaaccgaatcgaatatgactct
gaggcgagtgaaggaagtgaggatgacgacgaagatgaagactacaaagatgtgtttgac
ccaaactcgccacaaagggagcactccaacaataattcatacagttggtgtctgatgcgt
cttgccatggttcagttggtgctggttaacctcaagtccttttatcccattgccggatat
gatttactagacctccctgtggcgtcccctctgtgccacgctgtgctgaagatgctgcag
cgctgggagcaggtactgcagaagaggctggagctctttggtgggcccccttccaaatac
atctccactcacctcctggatgaaacgcctggcccagcacttctcaggcacaaagccctg
tttgaacccaccaacacaccattcagatcgagtcgtcattcgacactgccagtaaaacgt
ttgtggcagtttttagtgaaacaagaagaagtgcaagagacttttattcgcaacatcttc
accaaaaagcgtgacccaaatgagtcaattgaggaccaaactgacttagtgaaatattca
ggaatggacgaaaacgggacaaatcaggcggagtcagacagggccttccctggtggaaaa
gcacgaatcatccacaaggaatctgacatcatcacagcatttgccattaataaggcaaac
cgcaactgtttagtcatggcctccacccatgacattcaagagctcgatgtgtcatccatc
ttggctacacagatcatgacgtggatcgatgatgatgatgctgaagccaaaggtgtcagt
ggagatgagttcctggtggtccatgcacgtgatgactttgcggcgcttcatgggaccact
ccgtacacccacagtagccctggaacacccataaacatgccctggttaggaggtgtgcag
acaggacgaggagctgctgtgatgatcaagagaaacatcaacaatgtgagaagaatgacc
tctcatcccacgctgccctactatttgactggtgcacaagacggcagcgtgaggatgttt
gagtggggtcattctcaacagattatctgctttcggagtccaggaaactcaagagtcact
cgcatacgattcagccaccagggaaacaagtttggtattgtggacgcagatggggctttg
agcctgtggcaaacgaacaccagtggagtggcacccaaaccgtatctgacgcagcagtgc
cacaacaaaacggccaacgactttgtcttcgtgggctcctcgtcgctcatcgctacggct
ggactttccacagacaacaggaacgtgtgtctgtgggacactctggtcacacctgccaac
agcctcgtccacgctttctgctgccacgactccggggccacggtgctgtgtgtggccccc
cggcaggaactgctcatcaccggggggagaaggggctgggtcagtgtcctggagctatcg
cacaggcaccagaggcagagcttcctggcccacgactcgccggtcaaagccctcgccctg
gaccccaccgaggactgcttcatcagcggatcctccgagggcaacatcaaggtgtggagt
ctgagcgcgcagacgctgctctacgccttcccgcacgaacacgcccgccagtcgctcttc
cgtaacctgggcacaggcgtcatgcagatcgaggtggggccggccaaccacgtcttctcc
tgcggcgccgacgggaccatgaagctccggctgctcccgaaccgcttcgactcggcccgc
gacaaccacggcgacctcaagagcgacgtcaagttcttcatctga
DBGET
integrated database retrieval system
