Eucyclogobius newberryi (tidewater goby): 140347620
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Entry
140347620 CDS
T10929
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03030
DNA replication
eny03410
Base excision repair
eny03420
Nucleotide excision repair
eny03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140347620 (rfc5)
03410 Base excision repair
140347620 (rfc5)
03420 Nucleotide excision repair
140347620 (rfc5)
03430 Mismatch repair
140347620 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eny03032
]
140347620 (rfc5)
03036 Chromosome and associated proteins [BR:
eny03036
]
140347620 (rfc5)
03400 DNA repair and recombination proteins [BR:
eny03400
]
140347620 (rfc5)
DNA replication proteins [BR:
eny03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140347620 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
140347620 (rfc5)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140347620 (rfc5)
DNA repair and recombination proteins [BR:
eny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140347620 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
140347620 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_24
AAA_14
AAA_11
RuvB_N
AAA_assoc_2
AAA_16
DEAD
PhoH
DUF815
ResIII
AAA_19
AAA_7
AAA_5
AAA_30
ATPase_2
TIP49
TniB
DNAX_ATPase_lid
Mg_chelatase
AAA_2
Thioredoxin_6
Gp44_lid
DUF4119
Motif
Other DBs
NCBI-GeneID:
140347620
NCBI-ProteinID:
XP_072290274
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MASSSSKASQQTRNLPWVEKYRPQTLDDLISHKDILSTIQKFISEDRLPHLLFYGPPGTG
KTSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGCKLVILD
EADAMTRDAQNALRRVIEKFTENTRFCLIGNYLSKIIPALQSRCTRFRFGPLVPEQMIPR
LEHVVAQENIDITPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRS
DIANILDWSLNQNFTTAYNQILQLKTLKGLALHDILTEVHMLIHRVDFSPAIRMGLLIKL
ADIEHRLASGTNEKIQLSSMVAAFQAVRDLVTSEAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcgagcagtaaagcgtcacaacagacacggaatttaccttgggttgaaaag
tacagaccccagaccctggatgacttgatttcacataaagatattctaagcactattcag
aagttcattagtgaagacagacttccacacctcttgttctatgggcctccaggaacaggc
aaaacctccaccatcctggcctgtgccagacagctgtacaaggacaaggagtttaattct
atggtgttagagctcaatgcatctgacgatagaggtatcgatgtagttcgagggcccatt
ctcagtttcgccagcacgaggaccatttttaaaaaaggttgcaagttggttatattggat
gaggccgatgccatgacccgggatgcccagaatgctttgcggcgagtgattgagaagttc
acagagaatacccgtttttgtttgatcggaaactatctgtccaaaatcatccccgcgctg
cagtcgcgatgcaccaggtttcgcttcggcccactcgtcccagagcagatgatcccacga
ctggaacatgtcgttgcacaagagaacattgacataactccagatgggatgaaggctatc
gtgactttatcatcaggggacatgaggagatccctgaacatactgcaaagcaccagcatg
gcatatggcaaggtcacagaagacacggtctacacgtgcaccggtcatcctctccgctcc
gatatcgccaacatccttgattggtcactcaaccagaattttactactgcttacaatcaa
attcttcagctgaaaacattgaaaggcttagcgctgcatgatattctgaccgaggtccac
atgcttatacacagagttgatttttcccctgccattcgaatgggcctgctcatcaagctg
gctgacatcgaacacaggttggcctcaggaaccaatgagaagattcagctgagctccatg
gttgcagctttccaggcagtgcgggatcttgtgaccagtgaggctgcttag
DBGET
integrated database retrieval system
