Eucyclogobius newberryi (tidewater goby): 140348465
Help
Entry
140348465 CDS
T10929
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140348465 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140348465 (edc4)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140348465 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
140348465 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ApoLp-III
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
PIN_8
ERp29
UFL1
Motif
Other DBs
NCBI-GeneID:
140348465
NCBI-ProteinID:
XP_072290506
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MASSSNIDIEGATQHLRDILKLDRTGSDAQSSDEQRKSFNGELNGLLGAAGLLGSVDRSF
MAESSRPLSQDMSISKDSQIIFLSGDNGSTCKPMTSNNVEIVASKDSSINSKACGSNKVK
IQPVAKYDWEHKYYYGRLIAVSNSFLAYAIKGANNQAMIRVLSVGSTERALLKGFTGAVT
DLAFAHLDSSLLGCVDEAGNLVVWQLTSSPDKILDQVIVHIRRPEETLLNPHRRLIWCPF
ILDDNEENLDDISQTLALLHEDGAEVWDLEVLRANFSTWPIDAVDVSEGLITVNGHTRRV
SEGALSPDGTVLATASHDGYIKFWQIYIEGTQDKPRCLHELRPHGGQPLSCLLFCDNHKR
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPYNSTVLPSLKASLDLAAEY
LILTDVHRKVLYVMELQQDLEKGMASFTAVSEFLLTHPVLSFGVRDVLQTRFRHTEVLPA
EEEGESLTTEGTQGPAESKSGIQIKLYCVHTKSLQDVQILFQPNVCSSPVDFLPHSDSQD
GFGFSDHLTDQSSDKDSGSGSQTDLRKISSLPSPADFLTNSGAKLMTPDAFMTPSTSVPA
SPGSSASSLTIVTAISSNSDSTNRALDELVSQSPNRVENNCSSLGISTSCSSPRAASALL
SALDGIQPPSGSLVVDGSQVLDPPLLPPLASPTRARSPDVISSASTVMSQDAQTLQRGLV
STMDSLPLSTLQTDSMASAASALHLLTSPRAANSFLPLELGGAEGSVGGSSEAENRLSHT
PSLLETALSQENPGICSGASEGTVGHTPWPAAPDITRETRNSLRDNGIVDCSREESTDGH
LTSPYHRRSYHLTPNDSQEPGTEQSDPDDEVASLASSSGNCASRSSHRKQAKEWKGSPRG
SPKLKRKNKKEDREPSQLRQFSPGQVNSEVQDELLMLLRNQQRELSDLRGQIETMKCSIM
SQVEQALSSYQEKEQRRLERLLVESQSQQQQMQEHLSQHLSQTLTSALTNRMDRVLREEM
KKTVPQTISKSLEPVSSQMNNTIAAKLTAVEITLKDNVTKVVKSKNTTDAIGRAAAEAMQ
GPIQAAYKDAFQTVVLPVFERGCQSMFQQINDSFKQGTQEYIQQLEIHVKNRKQREQDAR
DPMIGQLQQMIDGFQNSTEQLSNSITANVRAEVQHQVQMLMGNLQESIFSHVQRIVKGEV
SLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQANILQLLQQGQLNQAFQQALSA
TDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLSSNLSTRSELKISYLEDAVMNL
DHSDPLTRDHMTSVLAQVRPKLFTYLQQDPHSALSKRARRLMMMLQGLVNH
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagttcaaatattgacattgagggggcaacccagcatttgcgggacatcctc
aagcttgaccgcaccggctctgatgcccaatcatcagatgaacagaggaagtcttttaat
ggagaactaaatggattactgggagctgcaggacttcttggaagcgttgatcgctctttc
atggcagaatcatccaggcccctttcccaagatatgagcatctccaaggacagtcagata
atttttctttctggtgataacgggtctacttgtaagcccatgacttctaacaatgtggag
atagtggcgagtaaagactcgagcatcaacagcaaagcttgtggcagtaacaaggtgaag
attcagccagtggcaaagtacgattgggaacacaaatattactatggaagacttattgcc
gtctcaaattcatttttggcttatgctattaaaggcgctaacaaccaagcaatgattcgt
gtcttgagtgtcggttctactgagcgtgcattgctgaaaggattcactggagcagtcaca
gatctggcttttgcccaccttgactcatctcttttgggctgtgtcgatgaagctggtaat
ctggtcgtctggcaactcaccagttcacctgacaaaatcctagaccaagtcattgttcat
attcgtcgtccagaagaaactctattgaatcctcatcgtcgacttatttggtgcccattt
atcttggacgataatgaagagaacctggatgacatcagtcagacactggcacttctacat
gaagatggggctgaggtatgggacctggaagttctacgagctaacttcagcacatggcct
attgatgcagtagatgttagtgaaggcctaattacagtgaatggccatactcggagggtt
agtgaaggagcactttccccagatggaactgtgttggcaacagccagtcatgatggatat
atcaagttttggcaaatatacatcgaaggtacacaggacaagccgagatgtctccacgaa
ttacggcctcatggaggtcagccactctcgtgtcttttgttctgcgacaaccacaagaga
caagatccagaggttccattctggcgctttctgattactggagcggatcagaatcaggag
ttaaagatgtggtgcactgtgtcctggacatgtttacagactattaggttttccccagat
ccctacaactccactgtacttccaagcctaaaggcgagcctagacctcgctgccgagtat
ctgattctcactgatgtgcatcgaaaggttctatatgtgatggagttacagcaggacctt
gagaagggaatggccagttttactgctgtgtctgagtttctcctcactcaccccgtactc
agttttggggtcagagatgtgctgcagactcgtttccgccatactgaggtcctgccagca
gaggaagaaggcgaaagtttgactactgaaggcactcaaggacctgcagaatcaaagtcc
ggaatccagattaaactctattgtgtccacacaaagagtctacaagatgtccaaatatta
tttcaaccaaatgtgtgttctagtcctgtagatttcctgccacattcagattctcaggat
ggctttgggttttcggaccatttgacagaccagagctcggacaaagactcggggagtggt
tcccagactgatttgaggaaaatttcttctcttcccagtccagctgattttctaacaaac
tcaggagccaaactcatgactcctgatgcctttatgacaccaagcacttcggttccagca
tcacctggtagtagtgctagcagtctcacaattgtaaccgctataagcagcaattccgac
tcaaccaacagagcattggatgagttggtaagccagagtcctaacagagtggagaacaac
tgcagcagcttgggcatttctacatcctgcagcagtccaagagctgcctctgcgcttctt
tctgcactggatggcattcagcctcccagtggttcacttgttgtggatggctcccaggtc
ctagaccctcctcttctcccacccttggcctcacctacccgtgcccgctcccctgatgtc
atctcgtctgcatccactgtcatgtctcaggacgctcagacgcttcagcgtggacttgta
tctacaatggactctttacctctctcaactctgcagacagacagcatggcttctgctgcc
tcagcgctgcatctgctcacctcaccacgggccgccaacagctttttgcctctggaactt
ggaggtgctgagggctctgttggtgggtcatcagaggcagaaaacagacttagtcacact
ccatctttactagagactgctttatctcaagagaaccctggtatctgctctggagcctca
gaaggaactgtgggccacacgccgtggccagctgcccctgatattaccagagaaaccaga
aacagccttcgggacaatggcatagtagactgttcaagggaggaatccacagatggacac
ctaacttcaccttaccatcgacgctcctatcatctcactccaaatgatagccaggagcct
ggaacagagcagagtgaccctgatgatgaggtagccagtctggcatcatcttcagggaac
tgtgcatcacgctcatctcacagaaaacaggcaaaggaatggaaaggctcaccacggggg
tctcctaaattaaaacgaaaaaacaagaaagaagacagggaaccgtcacagcttcggcag
tttagtccaggacaggtgaattctgaggtgcaggatgagttgttgatgctattgcgcaac
cagcagagggagttaagtgatcttcgtggacagattgaaaccatgaagtgctctattatg
tctcaggttgagcaggctttgagcagctaccaggaaaaagaacagcgcagattggagcgg
ctgctcgttgaaagtcagagtcaacaacagcagatgcaggagcatctgagccaacacctc
agccaaaccctgacctctgccctgaccaacaggatggaccgtgtactgcgagaggagatg
aagaaaactgttccacaaacaatctccaagagtctggaacctgtttcaagtcaaatgaac
aacactattgctgctaaactgaccgctgtggagatcacgctaaaagacaatgtcaccaaa
gtggtcaaatcgaagaatacaacagatgcgattggccgagctgcagcagaggcgatgcag
ggacctatacaggctgcttataaagatgctttccagactgttgtgcttcctgtttttgag
agaggctgccaatcgatgtttcagcagattaacgacagtttcaaacagggcacacaagaa
tacattcaacaacttgaaattcatgtgaagaaccgtaagcaaagggaacaggatgcacga
gaccccatgattggtcagctccagcagatgattgacggcttccaaaactccactgagcag
ctgagcaacagtatcactgctaacgtccgggcagaggtccaacaccaggtccagatgttg
atgggaaatttgcaagagtctatttttagccatgtgcagaggattgttaaaggagaggtg
agcttggcaatgaaagagcagcaggcagtagtcacctccagcatcatgcaggcgatgagg
tcagcagccggcacacccgtccccacggcccacctcgactaccagacccagcaggccaac
atcctccagctcctgcagcagggtcagctcaaccaggccttccagcaggccctctcagcc
acagacttgaaccttgtgttgtacgtgtgtgagaccatagactcccagcaggtgtttgga
cagcacccctgtcctctcagccaaccagtgctgctgtcactcatccagcagctttcctcc
aacctatccacccgctctgagcttaaaatcagttacctggaggatgctgtgatgaatctg
gaccacagcgaccctctgacccgcgatcacatgacgtctgtgctggcccaagtacgtccc
aaactcttcacgtacctgcagcaggacccccacagcgccctgagcaagagggcgcgccgc
ctcatgatgatgctgcagggcctggtcaaccactag
DBGET
integrated database retrieval system
