Eucyclogobius newberryi (tidewater goby): 140348507
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Entry
140348507 CDS
T10929
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
140348507 (tdrd12)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Gene silencing
piRNA pathway
140348507 (tdrd12)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
140348507
NCBI-ProteinID:
XP_072290541
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Position
Unknown
AA seq
1357 aa
AA seq
DB search
MLKISILKVESPAFLWGRIVGATAGDAQSMGQYDHMKAEINLFYHDVTQDQHKLDLNHSS
FEKGQVCVVYWPAIKSWCRAKMEAIITDSVSSQARCFLVDYGEQLVVSTNQIRVIMPDFL
LLPFWVQRFHLSGIRPTRLQVCVNEENAKMTPSCHWDSSATLYLHNLLQGSTQTEAVLYG
TEDDSTSIQLYLMFGTVKICVNDELVAKKFAYYSKDPAAAASGLDEEDRKPMMLSFNFTK
QAVNYLKPLPKSAPQSPPSAATCTMDSIETCTRPADASQTLTEMANAEKDSFTDVTEAEL
LFDSPSDKSSVACAAERGNNDSLLELEFQHLRNDTKSESSSLCGSETMEKSWRSEDHWAC
SRLLEWLNPDPLNHDVEAEEAAVAPAVDPEKDLHLVHSVLPLQPCQSLDNAPVTDHLRRL
IQRKWLYSLSAADRYSWPSVACGCNSLIVSPNADQPISYLPPFLTHVLHNSLFSSLTSST
GPIVVVVCPGWEKAQAIFDLLEELKVSHSLHPMIIHIGVKKDEAKSIKIPKNCLLVVTTP
FSLVRVLSLHCFLFLRMYHLVLDEADQLFTLAPDQMTTILQHFQKVTSSEDKLSCPQQIV
AVSKHWTSQMESLITVHMPHPSIIITVPEEAALYANVQQVILMSLESNKINVLLGTLDFN
PDVGLKTLIITSSPQEAEDVFKAVSNKSAFCMKSHEGLTHEFDFVVQQWRKSIGPGTHVI
LVTTDESLRCLGICDATCVIHYGFPASPRKFGSRHFSMVKNFRNLTEPGSQDKIETGRRL
SRSVLIISERNGRHVVGVLRYLGRTSAPLPPELLSFAQGVNVAREDQKTNRTLCGYLKSF
GTCRDGNTCPDRHSWNSHLDKSELPTSGVIEVVPLFIKTASVFYGRIVTKEEIDFESIAA
EVTAFYADKKPTATDVTEGALYAVQEDDVFHRVKVLSIPDRGDRLFFSVFVEFIDVGKRE
EVKAHQLLQLPEQFQSVPCQAVEIIVCRVKPSDSEKDWHPKVTIAVSQKIKGLQHRAKVV
LSLGNTIFVDPMVRVTQVPGVKTLINEYNLQSEILNSGMAESNPEHINLLKALYETDASC
KKLSVSINGAASLENRIQAEEEVLADAFRAAEFRKHAAVVERPQMLCPISIITKPVAPCA
PTPPSSPLPLSLPPLKLLNHAQMIEPPMAVLTSPIKTVEQCTRRKEDTTLQTNPVVHNAV
VEKYETTRRETISNHIGGEDQTKSLHPLVRWHQTSNSITVTLKLTNPEVQSCGFSSDRVV
FRGRIDNKWYEANLDLNKSIAADRCSWEIKSNEPVFTLIKQTPIYWEKLLKEKNIFVSYD
LDHFEENEDQACNGLSVLADIGEDNFFVYSGSDSDID
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatatccatcttgaaggtggaaagccctgcgttcctctggggtcgtattgtg
ggggccactgcaggtgacgcgcagtccatgggacagtacgatcacatgaaagcggaaatt
aaccttttctaccatgacgtcacccaggaccaacacaaactcgatctcaatcactcatct
tttgagaaaggacaggtctgtgtggtgtactggcctgctataaagtcatggtgtcgggca
aagatggaggcaatcatcacagactctgtgtccagtcaggctcgatgcttcttggttgac
tacggagaacagcttgtagtgtccacaaaccagattcgagtgatcatgccagacttcctg
ctgctaccattttgggtccagaggttccatctttcaggaataagaccaacacgacttcaa
gtgtgtgtgaatgaggaaaatgcaaagatgacaccatcttgtcactgggacagctctgct
acactttacttacataatctccttcaaggctccactcaaacggaagctgtgttgtatgga
acagaagatgattcaacatcaatccagctctatctcatgtttggtacagttaagatttgt
gtgaatgacgaactagtggccaaaaagtttgcttactacagcaaagacccagcagcggca
gcaagtggcttggatgaggaagatcgaaagccaatgatgttatccttcaacttcacaaag
caggctgtaaactatttaaagcctctaccaaagtctgctccacaatctccgccatctgca
gcaacctgcacaatggattcaatagagacatgcactaggccagcagatgcatctcagact
ttaactgaaatggctaatgctgaaaaagacagctttacagatgtgaccgaagcagaacta
ctctttgacagcccatcagataaaagttcagttgcttgtgctgccgaaagaggaaacaat
gactctctacttgagcttgagtttcagcatcttaggaatgataccaaaagtgagagcagt
agcttgtgtgggtctgaaacaatggagaagtcctggagaagtgaggatcactgggcctgt
tcacggcttttggagtggttgaacccagatcccctaaatcatgatgttgaggcagaagaa
gcggcagttgcaccagcagtggatccagagaaagacttgcacctggttcactctgtgctt
cccctgcagccatgtcaaagcctggacaatgcacccgtcactgatcatctccgccggctc
atccagaggaaatggctttactctctttccgctgctgaccggtacagctggccgtccgtg
gcttgtggatgtaacagtctgatcgtgtctccaaacgctgaccaaccaatcagctacctc
ccccctttcctcactcatgtcctgcacaactcccttttctcctccctcacctctagcact
gggcccattgtggtggtggtgtgtcctggttgggagaaagctcaagctatatttgacctt
ctggaggagctcaaagtcagccacagccttcaccccatgatcatccacatcggggttaaa
aaagatgaggccaaatccattaagatccccaaaaattgcctgctcgttgtgaccacaccc
ttcagtttagttcgagtcctttcccttcactgcttcctctttctgcgcatgtatcacctg
gtgttggatgaggctgaccagcttttcacactggcccctgatcagatgactactatcctg
cagcatttccagaaagtgacctccagcgaggataagctgtcctgtccgcagcagattgtg
gctgtgtccaaacactggaccagtcaaatggaaagtttaataaccgtccacatgcctcat
ccatcaatcattatcactgtccctgaggaggctgctctctatgcaaatgtacagcaggtc
attcttatgagtctagaaagcaacaaaatcaatgtacttctgggcactttggatttcaac
ccggatgtgggactgaaaactttaatcataacgtcctctcctcaggaagcagaggatgtt
tttaaggctgtgagcaataagtctgccttctgcatgaagtcccacgagggtctaacacac
gagtttgactttgtcgtgcaacagtggagaaaaagcattggtcctggaactcatgttata
ctggtgacaactgatgagtctctgagatgcttgggtatctgtgatgccacttgtgttatc
cattatggattccctgcctctcccagaaagtttggcagtcgacatttctcaatggtcaaa
aacttcagaaatctcaccgaaccaggctcccaagataaaatagagactggccgccgcctt
tccagatctgtgctgatcatctctgaaagaaacggccgtcatgtggttggagttttgcgt
tacttgggtcgaacgagtgcccccctccccccagagctgctgtcctttgcccagggtgtg
aatgtggccagagaggaccagaaaaccaacaggactctttgtggctacctgaagagcttt
ggaacatgcagggacggcaatacgtgtcccgatcgtcacagctggaattcacatctggat
aagtctgagctaccaacatctggagtcatagaagtggtgcctctcttcataaagaccgcc
tctgtgttttatgggcgcatcgtcacaaaagaggaaatagattttgaaagcattgcagcc
gaagtcactgctttctacgctgataagaagccaacagccactgatgtgactgaaggagct
ctgtatgcggtgcaggaggatgatgtctttcacagggtgaaggtcctgtccatccctgac
agaggagaccgactgtttttcagtgtttttgttgagttcattgacgttggtaaaagggaa
gaagtcaaagcccatcagctgcttcagttaccggagcagtttcagtccgtcccatgtcaa
gccgtggaaatcatcgtgtgtcgagtgaaaccgtccgactctgagaaagactggcatcca
aaggtcacgatagcagtaagtcagaagatcaaaggcctgcagcacagagctaaagtagtt
ctcagtctgggaaacacaatctttgttgacccaatggtgcgggtcactcaagtaccaggt
gtgaaaactctgataaatgagtacaacctccagtctgagatcttaaacagtgggatggcc
gagagtaacccagagcacatcaacctcctcaaggcgctgtacgagaccgacgcgagctgc
aaaaagctctctgtgtccattaatggcgcagcctctttagaaaaccgcatccaggctgaa
gaggaggtcctcgctgatgcatttagagcggctgaattcaggaaacatgcggctgtagtg
gaacgacctcagatgctgtgtcccatctccatcataaccaaaccagtggccccctgtgca
cctacacccccatcgtcccccctgcctctgtcacttcctcctctgaagcttctgaatcat
gcccaaatgattgaaccaccaatggccgttctaaccagtcccatcaagactgtggagcaa
tgtacaagaaggaaggaagataccactttacagaccaatccagttgttcacaatgctgtt
gttgagaagtatgaaactaccagaagagagactatcagcaaccacattggtggtgaagat
cagaccaaaagcctacaccccttggtccgctggcaccagacgtccaactccatcactgtg
acactaaagctgacaaacccggaagttcagagctgtggtttctcatcagatcgagttgtg
ttcagagggaggattgacaacaaatggtatgaagccaacctggaccttaacaaaagcatt
gcagctgatcgctgctcatgggaaatcaagtccaatgaaccggttttcacactcatcaag
cagacacccatctactgggagaaactattgaaagaaaagaatatatttgtgagctacgac
ttggatcattttgaggaaaatgaggaccaagcatgtaacggcttatctgttttggcggac
attggcgaggacaacttttttgtgtattcaggaagcgactccgacattgactga
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