Eucyclogobius newberryi (tidewater goby): 140348631
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Entry
140348631 CDS
T10929
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140348631 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eny03021
]
140348631 (sf3b3)
03041 Spliceosome [BR:
eny03041
]
140348631 (sf3b3)
03036 Chromosome and associated proteins [BR:
eny03036
]
140348631 (sf3b3)
Transcription machinery [BR:
eny03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140348631 (sf3b3)
Spliceosome [BR:
eny03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140348631 (sf3b3)
Complex B
140348631 (sf3b3)
Complex C
U2 SnRNP specific factors
140348631 (sf3b3)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
140348631 (sf3b3)
TFTC complex
140348631 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
140348631
NCBI-ProteinID:
XP_072290725
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNIFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELESLSPIMSCQIADLANEDT
PQLYAACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPVGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVDKQDEIGEKGSM
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGTGQWASLVRLVNPIQGTTLDQVQLEQNEAAFSVAVCRFPNTS
DDWFVLVGVARDMILNPRSVGGGFIYTYRLIGGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVSGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNITIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKADVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacattaccctacagagggccactggcatcagtcatgccatccatggg
aatttttcaggaactaagatgcaggagattgttgtttcccgggggaaaattttggagtta
ttaaggccagatgcaaacacaggaaaagtgcacaccttgcttacagtggaagtgtttggg
attgtccggtctttgatggcatttaggttaaccggaggaactaaagattacattgttgtt
ggaagtgacagtggtcgcattgtgattttggaataccacccttcaaaaaacatttttgag
aagatccaccaagaaacttttgggaagagcggttgcaggcgtattgtccctggacagttc
ctggccgtggaccctaaaggcagagctgtcatgataggggccatagaaaaacagaagttg
gtttatattctgaacagagatgccgctgctcgactgaccatctcatctcctttggaagct
cataaagcaaacactcttgtctaccatgtagtaggagttgatgttggatttgaaaatcct
atgtttgcctgtcttgaaatggattatgaggaagctgataatgatcctacaggagaagcg
gctgctaacacacagcaaaccctcaccttttatgaactggacctgggcctaaaccatgta
gttcgtaaatacagtgaggctttggaagagcatggaaattttctcattactgttcctggt
gggtcagatggtcccagtggtgttttgatctgctccgaaaattacataacatacaaaaac
tttggagatcagccagacattcgttgtcccatcccacgacgcagaaatgacttggacgat
cctgagcgaggcatgatttttgtgtgctcagccactcacaaaacgaagtctatgttcttc
tttctggcacaaactgaacaaggagacatttttaaagttactttggaaaccgatgaggaa
atggtcacagaaatcagactgaagtactttgatacaattccggttgcaacagcaatgtgt
gtcttgaaaactggattcctgtttgttgcctcagaatttggaaatcactatctttatcag
atcgctcatttgggagacgatgatgatgagccagagttttcctctgctatgccattggag
gagggagatacattctttttccagcctcgtcctctcaaaaacctggtgttagttgatgaa
ctggagagtttatcaccaataatgtcatgccagattgctgatttggccaatgaagacact
cctcagttgtatgcagcatgtggaagagggccacggtccaccctgagagtccttcgacat
ggtttagaggtttcagagatggctgtctcagaactgcccggtaacccaaacgctgtgtgg
accgtacggaggcatgtggaagatgagtttgatgcgtacatcattgtatctttcgtaaat
gccactttggtcttgtctatcggagagactgttgaagaagtgacagattcaggcttctta
ggaacaacaccaacactgtcttgctcattgcttggtgaagacgcactagtccaggtttac
ccagatggaatccgtcacattagagccgataagcgtgtgaatgaatggaaaacgcctggt
aaaaagaccatagtacgctgtgctgtaaaccaaaggcaagtggtcattgccctgactgga
ggcgagctggtctactttgagatggatccgtctggccaactgaacgagtacactgagcgg
aaggagatgtctgcagatgtggtctgcatgagccttgctaatgtccctgtcggtgagcag
cgctccaggtttttggctgtgggtcttgtagacaacactgtgcggattatctccttggat
ccttcggactgtctccagcctctgagtatgcaggccctgccagctcagcctgagagtttg
tgcattgtggaaatgggaggggttgacaaacaggatgaaattggagaaaagggatcaatg
ggttttctctatctcaacattggacttcagaatggagtgctactgcggaccgtgttagac
ccagttaccggtgacctctcggataccagaactcgctacctgggttcacgtccagtcaaa
ctcttcagagtcagaatgcagggacaggaggctgtgctggccatgtcgagtcgctcctgg
ctgagttactcatatcagtcccgcttccacctgaccccactgtcctatgagactctggag
tacgcctctggctttgcctcagagcagtgccctgaaggcattgtggccatttccacaaac
actctcaggatcttagcgttggagaaactaggtgccgtcttcaaccaggtggcctttccc
cttcagtacactcccagaaagtttgtaattcatccagagaccaacaaccttgttttgatt
gagaccgaccacaacgcctacaccgaggcaaccaaagcccagagaaagcaacagatggcc
gaggagatggtggaagctgccggggaggatgaaagggaactggctgctgagatggctgcg
gcttttcttaatgagaatctcccagaagccatttttggttcccctaaagcagggactggc
cagtgggcttccctggtgagactggtcaatcccatacaaggcactacactggaccaagtc
cagctggagcagaatgaagctgctttcagtgttgctgtgtgccgcttcccaaacaccagc
gatgactggtttgtccttgttggtgtggcccgagacatgatcttaaaccccaggtcagtg
ggtgggggctttatctacacctaccggctcattggaggtggggagaagctggagtttgtg
cacaagacccctgttgaggatgtgccactggccattgctccattccaaggacgtatctta
gtcggagtcgggaagctgcttcgaatctacgatttggggaaaaagaagctgttgaggaaa
tgtgaaaacaagcatgtgcctaatctggtgtcgggcatctataccattggccagcgtgtc
atcgtgtcggacgtccaggagagtctgttctgggtccgttacaggcgcaatgaaaaccag
ctgattatctttgctgacgacacgtacccgcgatgggtcactacggcctgtctactagac
tatgacaccatggcctctgccgacaagtttggaaacatcactattgtccgacttccccca
aatacaagtgatgacgtagatgaagaccccactggcaacaaagccctatgggacagaggt
cttcttaatggagcttcccagaaggctgatgtgatcgtcaattaccacgtcggagagact
gtgctgtcgctccaaaagaccaccctgattccaggaggctctgaatcgcttgtctacacc
acattgtcgggaggcattggtattctggtgccattcacgtcacatgaggatcatgacttc
ttccagcacttagagatgcacatgcgctcagagttccctccactttgtggcagagaccac
ctcagctttagatcctactatttccctgtaaagaacgtgattgatggagatctgtgtgag
cagttcaacagcatggaccctcataaacagaagagcgtggctgaggagctagacagaact
ccacctgaagtatcaaagaagctagaggacattcgcacacgctatgctttctaa
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integrated database retrieval system
