Eucyclogobius newberryi (tidewater goby): 140349381
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Entry
140349381 CDS
T10929
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04510
Focal adhesion
eny04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140349381 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140349381 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
140349381
NCBI-ProteinID:
XP_072291792
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MRLLRLTLLLALQACAGAQLEPAEAVVPEMSDVCTEGSCYPATGDLLIGRAHQLSSTSTC
GEHRPEPFCIVSHLQEEKKCFVCDSTAPYDDRNNQTSNHRIENVVTTFAVNRLKTWWQSE
NGMENVTLQLNLEAEFHFTHLIMTFKTFRPAAMVIESSSDFGKTWQVYRYFAYDCESSFP
SVSQGPMRKVDDVICDSRYSDIEPSTEGEVIFRVLDPVFRIDDPYSPRIQNMLKITNLRV
KLTKLHTLGDNLLDSRMEIKEKYYYSIYDMVVRGNCFCYGHASECAPVEGTGQAIEGMVH
GHCMCNHNTKGLNCEKCEDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVFEASG
NVSGGVCDECRHHTAGHQCELCQPFYYQHPERDIRDPNICQPCNCDPVGSLNGGICDGLT
DVRGGLIAGQCRCKVNVEGERCERCKQAHYGLSDEPEGCKPCTCSALGTLPGGNPCESET
GSCFCKRLVTGRDCDQCVAEHWGLSSDMDGCRACDCDLGGAVNNQCDQVTGQCVCRPHMF
GRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPLDRSPTWTGMGLVNVPEGAY
LEFSVDNIPHPMEYDVVIRYEPQLPEQWEEVLLTVIRPGPITADSRCVNTVPDDDNQMVS
LHPGSRHVVLPRPVCFESGLNYTIRLSLPLYSALSDVQSPYTLIDSIVLMPNCKNLEIFT
ASEGADSLGPDAWDMFQRYRCLEHSLSVVKTPMTDICRNYIFSISAMLHQGAKECQCDPQ
GSLSTVCDPSGGQCQCKPNVVGRNCDRCAPATFQFGPNGCRACECDPQGSLSALCDPLSG
QCGCVPGGYGRQCDRCLPGQWGFPACRLCSCNGHTEECHPQTGQCLSCRDHTTGHGCERC
LDGYYGDPVLGSGDHCRPCLCPDGPGSSRQYAGTCYRGDSSVQAVCVCEPGYRGARCDQC
SPGHYGNPGEAGGQCRPCECHGNIDMLDPESCDAASGECVRCLYHTEGGNCGLCKHGYYG
DALRQDCRKCVCNHLGSVPSSCRGPGECECDRSSGQCQCLPNVAGQYCDRCAADTWNLAS
GAGCESCGCNALHSHGTSCNEISGQCSCKLGFGGRTCSECRELFWGDPEVKCHACDCDPR
GLSQEQCDKSSGHCVCVEGVTGPRCDVCARGFSGTFPDCHRCHQCFSEWDAIVGQLANHT
HRLVSKVKAVKQSGAASGPYSSTMDSMERSAEHVQNLLHNNPASQPLSEVQELLQQASEL
MGALTKSLNSTEQALVQTSVQDQDVQNRLDALSSDSHKLERTVRELLDQVEFIKNSDIRG
ATASVHKYYLQSQASSARVNASTVGQNSTAETSARLRQLTEDKLNQTAVDFKKNHAEHAQ
KLDDLAGELQSLDLSELSHKTCGSVVSRDACSSCGGLGCLDSEGRPKCGGEGCGGLLTTA
KNTWIRARDSEQEIISAIEEVERLSKMVSEAKLKADEAKLSARDVLLKTNRTKDRVDRSN
EELRSLIKQIRDFLTQDAADLESIELVANEVLAMQMPTSPEQLQNLTEEIRLKVEELGSV
GDILEQSSQDIQRAEALLEQARRASSEAADVRDSAEKVKQALDEAQKAQSAASNAIKQAT
HDIQTTNKLLSTVESETAEAEQKLTEATTRVQNLERNVTSLRDKALDVTQTSERTKEDAA
VIEKIADQVKKDLDSEIKDKYSTVEKLVDDKAAGLSDAKKRAESLQKEAKDLLLQASDKL
KLLKDLEKSYEVNHKTLERKAVQLVELETAVKELLREISNKVTVYSTCLL
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctgcgactgacgctgctgctcgccctgcaggcgtgcgcgggggcccagctc
gaaccggccgaagcggtggtcccggagatgagcgacgtgtgcacggagggcagctgttac
ccggcgaccggagacctcctgatcggccgcgcccaccagctctcgtccacctccacctgc
ggcgaacaccggcccgaaccgttctgcatcgtcagccatctgcaggaggagaagaaatgc
ttcgtgtgcgactccaccgccccctacgacgaccggaacaaccagacgagtaaccacagg
atcgaaaacgtggtcacgaccttcgccgtcaaccgactcaagacctggtggcagtcggag
aacggcatggagaacgtgaccctccagctgaacctagaagcagagtttcacttcactcac
ctcatcatgacgttcaagactttccgcccggccgcgatggtcatagagagctcctcggac
ttcggcaaaacgtggcaggtttatcggtacttcgcctacgactgcgagagctcgttcccg
tcggtgtcgcaggggcccatgaggaaagtggacgacgtcatctgcgactccagatactcc
gacatcgagccgtccaccgagggagaggtcatcttcagagtgctggacccagtttttagg
atcgacgacccgtacagccccagaatacagaacatgctgaagatcacaaacttgagggtg
aagctgaccaagctgcacacgctcggagacaacctgctcgactcgcgcatggaaatcaag
gagaagtactactactccatctacgacatggttgtccggggtaactgcttctgctacgga
cacgcctccgagtgcgcgccggtcgaggggacgggccaggccatcgagggcatggtccac
ggtcactgtatgtgtaaccacaacacaaaaggactgaactgtgagaagtgtgaggacttc
taccacgatctgccctggagaccggctgaaggacgcaacaccaacgcctgcaagaagtgt
aactgtaaccatcactctgactcctgccacttcgacatggcggtgtttgaggcgtctgga
aacgtgagcggaggagtctgtgacgagtgtcggcaccacacggcagggcatcagtgtgaa
ctgtgccaacctttctactaccagcacccagagcgggacataagggaccccaacatctgc
caaccctgtaactgcgaccccgtgggctctctgaacggggggatctgcgacggtctgacg
gacgtgcggggcggactcatcgccggccagtgtcgctgcaaagtgaacgtggaaggcgag
cggtgcgagcgctgcaaacaggcgcactacggcctgagcgacgagccagaaggatgtaaa
ccgtgcacgtgcagcgctctggggacgcttcccggaggaaacccctgcgagagcgagacg
ggaagctgcttctgcaaacgcctggtgaccggacgagactgcgaccagtgcgtggctgaa
cactggggcctgagcagcgacatggacggatgtcgagcctgtgactgcgatctgggagga
gcagtcaacaaccagtgtgaccaggtgaccgggcagtgcgtgtgccggcctcacatgttc
ggacgccgctgtgatcaggtcgagtccggcttctacttcatcgccctcgaccactacacc
tacgaggccgaggacgccaagttcggacccggggtgacggtggtgcagaggccacacccc
ctggaccgcagtcccacctggaccgggatgggcctggtcaacgtcccggagggggcttac
ctggagttctccgtggacaacatccctcaccccatggagtacgacgtcgtgattcgctac
gagccacagttgccggagcagtgggaagaggtgcttctgacggtgatcaggcctggacca
atcacagccgacagtcgatgtgtgaacactgtccccgacgacgacaaccagatggtgtcg
ctgcacccgggctcacgtcatgtggttctgccgaggccggtgtgtttcgagtctggtctg
aactacacgatccgcctgagtctgccgctttactccgccctgagcgacgtccagtctccg
tacacgctcatcgactctatcgtgttgatgccgaactgcaagaacctagagatcttcacg
gcgtccgagggcgcggactccctcgggccggacgcctgggacatgttccagcggtatcgg
tgtttggagcacagcctcagcgtggtcaagacgcccatgaccgacatctgcaggaactac
atcttcagcatctccgccatgctgcaccagggagccaaagaatgccagtgtgacccgcag
ggctcgctcagcaccgtgtgtgaccccagcggcgggcagtgccagtgcaagcccaacgtg
gtgggcaggaactgtgacaggtgcgccccggccacgttccagttcggacccaacggctgc
agagcgtgcgagtgtgacccccagggctcgctctccgccctgtgcgaccccctcagcggg
cagtgcgggtgcgtgccggggggctacgggcgccagtgcgaccgctgtctgccgggacaa
tggggcttcccggcctgtcgcctctgcagctgtaacgggcacacggaggagtgccacccg
cagacgggacagtgtctgagctgcagggaccacaccacgggacacggctgcgagagatgc
ctggacggttactatggcgaccccgtcctgggctccggtgaccactgtcggccctgtctc
tgccccgacggacccggcagctccagacagtacgccgggacgtgttaccgtggagacagc
tccgtgcaggccgtgtgtgtgtgcgagccgggatacagaggtgcccgctgtgaccagtgt
tcgcccggacactacgggaacccgggcgaggcggggggccagtgccgtccctgcgagtgc
cacggcaacatcgacatgctggacccggagtcgtgcgacgcggcgagcggcgagtgcgtc
cgctgcctgtaccacaccgagggcgggaactgtggcctgtgcaagcacggttactacggc
gacgctttacggcaggactgcaggaagtgtgtgtgtaaccacctgggcagcgtcccgtcc
agctgccgcggccccggagagtgcgagtgcgaccggagcagcggacagtgccagtgcctg
cccaacgtggcgggccagtactgcgaccgctgcgccgccgacacctggaacttggcgagc
ggggccggctgcgagagctgcggctgcaacgctctgcactcccacgggacgtcctgcaat
gagatcagtggtcaatgctcgtgtaaactcgggtttgggggccggacctgcagcgagtgt
cgggagctgttctggggagatccagaggtcaaatgtcacgcgtgcgactgcgaccctcgg
ggcctctctcaggagcagtgtgacaagtcctctggtcactgtgtgtgtgtggagggagtg
accggccccagatgtgacgtgtgcgctcgcggtttctccggcacgttccccgactgccac
cgctgccaccagtgcttcagcgagtgggacgccatcgtggggcagctcgccaaccacacc
caccgactggtgagcaaagtgaaggcggtgaagcagagcggagcggcgagcggcccgtac
agcagcaccatggacagcatggagcgcagcgctgagcacgtccagaaccttctacacaac
aacccagcatcacagcctctgagcgaggtccaagagctgctgcagcaggccagtgagctg
atgggggccctgaccaagtccctgaactccacagagcaggccctggtccagacctcggtc
caggaccaggacgtccagaacagactggacgctctgagctcagactcacacaaactggag
cggacggtccgagagctgctggaccaggtcgagttcatcaagaactcagacattagaggg
gcgacggccagtgtgcacaagtactacctccagtcgcaggcctcctcggcccgagtgaac
gcctccacggtgggtcagaacagcaccgcggagacctcggcccgactacggcagctgacg
gaggacaagctcaaccagaccgcggtggacttcaagaagaaccacgcggagcacgctcag
aagctcgacgacctcgccggagagctgcagagtctggacctgtcggagctcagtcataag
acgtgtggcagtgtggtgtcccgggacgcctgctcctcctgtggaggcctgggctgcctg
gactcagaaggtcgccccaaatgtggtggcgaaggctgcggcggtttactgaccaccgcc
aaaaacacctggatcagagcgagagactctgagcaggagatcatcagcgccatcgaggaa
gtggagcgactgtccaagatggtgtccgaggccaaactcaaggcggacgaggccaaactg
agcgcccgggacgttcttctgaaaaccaaccgcaccaaagaccgagtggaccggagcaac
gaggagctgcgcagcctcatcaagcagatccgcgacttcctcacgcaggacgccgcggac
ctggagagcatcgagctggtcgccaacgaagtgctggccatgcagatgcccacgagcccc
gagcagctgcagaacctgacggaggagatccggctgaaggtggaggagctgggcagcgtg
ggcgacatcctggagcagagcagccaggacatccagagggcggaggctttgctggagcag
gcgcgacgggccagttctgaagcggccgacgtgagagactcggctgagaaagtgaagcag
gctctggacgaggctcagaaagctcaaagtgctgcatccaacgcaataaaacaagccacg
cacgacatccagaccaccaacaaactgctgtctacagtggagtctgaaacggcagaggcg
gagcagaaactgaccgaggccacgacgcgagtccaaaacctggagcggaacgtgacgtcg
ctgcgagacaaagctctggacgtcacacaaacatcggaacgaaccaaagaggacgcggcc
gttatcgagaagatcgcagaccaagtgaaaaaggacttggactcagagataaaggacaaa
tactcgacggtggagaagctggtggacgataaagccgcgggtttgtcggacgcaaagaaa
cgtgccgagtcgctgcagaaggaggccaaagatctgctgctccaggccagcgacaagctg
aagctgctcaaagacctggagaagtcgtacgaggtcaatcacaagactctggagcgtaaa
gccgtgcagctggtggagctggagacggcggtgaaggagttactgcgggaaatcagcaac
aaggtcacggtttacagcacctgcctgctctga
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integrated database retrieval system
