Eucyclogobius newberryi (tidewater goby): 140349404
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Entry
140349404 CDS
T10929
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eny04515
]
140349404 (pcdh18b)
Cell adhesion molecules [BR:
eny04515
]
Cadherins
Protocadherins
140349404 (pcdh18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
Ly49
TMEM154
Motif
Other DBs
NCBI-GeneID:
140349404
NCBI-ProteinID:
XP_072291821
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MGARTGDKVLLLLAVFCALAHGKTLKYKVYEEQRVGSVIARLKEDVSGVLAKLPASLSFR
FRAMQRGSTQFLTVREEDGEISIATKIDREKLCEKNLNCTIEFDVVTLPTEHLQLFHVEV
EVLDINDNAPHFSRAVVPLDISESASVGTRMPLDGAVDADVGDNALHVYSLAPNNFFRIE
VRTRTDGAKYAELVVMRELDRESQTAYQLLLTASDNGVPPKSGSTLLKISISDSNDNSPA
FDEQAYVVTLLENSPVGTLILDLNATDPDEGTNGKIVYSFSSHVSPKILETFKINPETGH
ITLIKKVDYETTASYELDVQAQDMGPNSIPGLCKIVIKVADVNDNKPEININLMTPGKEE
VAYISEGAPVDTFIALVRVDDSDAGVNGEVVCRLHGHGHFRLQKTYEKNYMILTNVSLDR
EKRSEYSLTVIAEDKGSPSLSTIKHFTVQVLDENDNPPHFEKNRYEVFKSENNSPGAYLM
TVVASDPDLGTNGQVTYNVIDVLIQGSPISTYVTIDPSNGAIYALRSFDHEDVSRIAFTV
QARDGGNPPLSTNTTVLLTVLDENDNAPVILSPALRNYTAELAVWRYASPGQMVTAMKVS
DRDAGANGELSCSIVSGNDEGLFVMDPRRCELRTNASLEQVNRDVVEIRVEVQDRGTARL
STGALLRLGLQETMEVLAPLYPSGSGQASLDLSLIIIISLGAVCALLLVVMVMFATARCS
REKKDPRHNYNCRMAESSYQNHPKKPARQIHKTDITLVPTVNGTLPVRAHPRSPSASPTP
DRGTLGSRQSHHSRQSLNSLVTISSNHVAENFALELAHATPPVEQVSQLLSMLHQGQYQP
RPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMERLLGEGFSEAY
GHDGPHRPHAGMRLCTEECRVLGHSDQCWMPPLASPASSSSDYRSNLYIPGEEARQPTEL
PQETAPVPCTDRNQSFSTFGKDLSAEEGEEGGEGGTMALRDEDVCGTSSLLSEMSSVFQR
LLPQGLDAYVQVNESQRGTSLSGVGVPLSGSLDRRRGHLPGKASPSVHQQGVAAWAANTH
FQNPSMGHPQPGAYHTLKPSTKLGSQPKHSPQNSSSKAHSASLLTAMVSPALQNAPAPSV
PVPVPLPGPPAKWLPAMEEIPENYEEDDFECVLGHLQGKRSDSRHELVDASELVAEINKL
LQDVRQS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcacgcacaggggacaaagtgctgctgctgctggccgtgttctgcgcgctggcg
cacgggaaaactctcaaatacaaagtttacgaggagcaaagagtgggcagcgtgatcgcg
cgcttaaaggaggacgtgtccggtgttctggccaaactgcccgcttctctgagctttcgt
ttccgcgccatgcagcggggcagcacgcagttcctcacggtgcgcgaggaggacggagag
atcagcatcgcgaccaagatcgaccgcgagaagctgtgcgagaagaacctgaactgcacg
atcgagttcgacgtggtgacgctgcccacggagcacctgcagctgttccacgtggaggtc
gaggtgctggacatcaacgacaacgcgccgcacttctcccgcgccgtcgtgccactggac
atctccgagagcgcgtcggtgggcacgcgcatgccgctggacggtgccgtggacgcggac
gtgggggacaacgctctgcacgtgtactctctggcgcccaacaacttcttccgaatcgag
gtgaggacgcgcacggacggggccaagtacgcggagctggtggtgatgcgcgagctcgat
cgcgagtcccagaccgcgtaccagctgctgctcacggcgtcggacaacggcgtgcccccc
aagtccggctccactttactcaaaatcagcatctccgactccaacgacaacagcccggcg
tttgacgagcaggcgtacgtggtgaccctgctggagaactcacccgtggggaccctcatc
ctggatctgaacgccacggacccggatgaagggacgaacgggaagatcgtctactcgttc
agcagccacgtctcgccaaagatcctggaaacttttaaaatcaacccagaaacgggccac
atcacgttgatcaagaaggtggactatgaaaccactgcgtcctacgagttggacgttcaa
gctcaggatatggggcccaactccatcccgggactgtgcaaaatcgtgatcaaagtggct
gacgtgaatgacaacaaaccggagatcaacataaacctgatgacaccggggaaggaggag
gtggcgtacatctcggagggcgcacctgtggacaccttcatcgcgctggtcagggtggac
gacagcgacgccggggtgaacggggaggtggtgtgcaggctccacgggcacggccacttc
cggctgcagaagacctacgagaagaattacatgatcctcaccaacgtgtctctggacagg
gagaagcggtcagagtacagcctgaccgtcattgctgaggacaaggggtcgccgagcctg
tccaccatcaaacacttcacggtgcaggtgctggatgagaatgacaatccgccgcatttc
gagaagaacagatatgaagtgttcaagtccgagaacaactccccgggggcatacctcatg
accgtggtggcttcagatcccgatttagggacaaacggacaagtgacgtacaatgtcatt
gatgtgctcattcaaggaagtcccatctccacctacgtcaccatcgacccgtcaaacggg
gccatctacgccctgaggagctttgaccatgaggatgtgagccgtatcgccttcacggtg
caggcccgggacggaggaaaccctcctctgtctaccaacaccacagtgctcctcaccgtg
ctggacgagaacgacaatgccccggtcatcctgtcgccggccctgaggaactatacggcc
gaactggctgtgtggaggtacgcttccccggggcagatggtcactgccatgaaggtgagc
gaccgggacgcaggcgccaatggggaactcagttgctccatcgtgtctggcaacgatgag
gggctgtttgtcatggacccccgccgctgcgagctccggaccaacgccagtctggagcag
gtcaaccgggacgtggtcgagattagagtggaagtccaggacagaggcactgcccggctg
agcacaggggcgctgctgaggctgggactgcaggagaccatggaggtcctggccccgctg
tacccatccggctccggtcaggcctctctggacctgtccctcatcatcatcatctccctg
ggggctgtgtgcgccctgttactggttgtcatggtcatgttcgccacagcccggtgcagt
cgtgagaagaaggacccccggcacaactacaactgtcgcatggccgaaagcagctaccag
aaccaccccaagaaaccagctcgccagatccacaagacggacatcacactggtgcccacc
gtcaacggcacgctgcccgtccgagcccacccacgctcgccctctgcctcgcccacaccc
gaccggggcaccctcgggagtcgccagagccaccacagccgccagtcgctcaacagcctg
gttacaatctcctccaatcacgtggcggagaactttgccctggagctggcccatgccacg
cccccagtggagcaagtctcacagcttctgtccatgctccatcagggccagtaccagcca
cgcccgagcttccgcggcaacaagtacacgcgcagctacagatacgccctgaacgagatg
gataagttcagcctgaaggacagcgggcgcggggacagcgaggcgggtgacagcgactac
gagccgggtcgagagtcgcccatggagaggctgctcggggaaggcttcagtgaggcctac
gggcatgacggaccgcacagaccgcatgcaggcatgaggctgtgcacggaggagtgcagg
gtcctgggacactcggaccagtgctggatgccccccctggcctcgcccgcctcctcttcc
tctgactacaggagtaacctgtacatccccggagaagaggcccgccagcccacagagctg
ccccaggagacagcccctgtgccctgcacggacagaaaccagagcttctccaccttcggt
aaagacctgagcgcagaggagggcgaggaggggggtgagggtggcactatggctctgcga
gacgaggatgtgtgtgggacgtcctctctgctgtccgagatgagcagcgtgttccagaga
ctgttacctcagggtttggacgcgtatgttcaggtgaacgagagccagcggggcaccagt
ctaagcggggtgggggtccctctgagcggctccctggaccgcaggaggggccacctcccg
ggcaaggccagcccctcggtgcaccagcagggggttgcggcctgggctgccaacacccac
ttccagaaccccagcatgggccaccctcagcccggggcctaccacaccctcaaaccaagc
accaagctgggctcgcagcccaaacacagcccccagaacagcagctctaaagcccacagc
gcctccctgctgaccgccatggtcagccccgctctgcagaatgcacctgctccctctgtg
cccgtccccgtgcccttgcccggaccccccgccaagtggctgccggccatggaggagatc
cccgagaactacgaggaggacgactttgagtgtgttctgggccacctacagggcaaacgc
agcgacagcaggcacgagctggtggacgccagcgagctggtcgccgagatcaacaaactt
ttacaggacgtaaggcagagctag
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integrated database retrieval system
