Eucyclogobius newberryi (tidewater goby): 140349406
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Entry
140349406 CDS
T10929
Symbol
nlrc5
Name
(RefSeq) protein NLRC5
KO
K22615
NLR family CARD domain containing 5
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
eny04054
]
140349406 (nlrc5)
Pattern recognition receptors [BR:
eny04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
140349406 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
NPHP3_N
AAA_25
AAA_22
AAA_16
ATPase_2
AAA_30
Mg_chelatase
Atypical_Card
AAA_24
Motif
Other DBs
NCBI-GeneID:
140349406
NCBI-ProteinID:
XP_072291819
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MEEEIDPDQDNANIVLDQEYSELLHILTNQPSTALMKLCEMASTDGAGQISTINPTSSSA
AAVRGLLDFYSTADSSLCSDFLQRVCLLCENIPMLLESRLMSVSGNLNVRDISRLQVAES
LETQIIKRPRIDPWEEFITSVQDLLRMRWGAMRKQLVMGVELDNVWVGVRRANRARERPD
QTPGSVDQGSRTPVLDVECGSPEATVTLDIFLQGSMGKVTIVYGPPGSGKTVLMSRLGDL
WAYNLGHIPSSHLFVLLEFRYLNLLPKILSFYELLFLYYPSPPGGEEEKNAILDYLLSNP
EQSCWVLDGYDEFHYNIDETDSNNAQLDPRSRRPVAELISALLHRHLLPGCTIVLTCRVR
EAKDLQHKAEKVGELQPWNQHKIKEYVEQYFILKDNLAAGKHATKLLFSNKHLVAMSSIP
GLCNISCICLEYLLQEIQPSSEDKLDAKNHKDDVQSVPRMPSTLTKVYLTSIGTCLNRCL
NQEATSAKVRFSQRALLPLTSLVSHYKSELIELYELAWKGLETGKILFLEDEIPYSILDF
SVTSGFISQTELRQDGVLVTVYGFIHLTVQEFLSALKIMTSLDDKELRNRLSLKTRWLSK
SSQKTVFTNSLHLFLSGLASPPCAAVIALLTKEDHTFVQKRQETVTKMLHQMCHVHMTGP
KVLELCHCVQETQDNTLSKELMSVKPQLELRNMSLSSNDLDALAFVVNSSEERNIGLDFR
ACSIDLDGLKLLSQCNTITYLSFHSRKYGDSFAEKLSTVLPKFVSLKKLSFCGTRVTATG
AAHLASALLKCTCITELDLSGNNLKDDGTKHVTDILSKLPQLSFVNLGQNNTSLQAAVYL
TQETSSMNVQCIYIDGGIQDLKVTFDPNRDRNSHKADSQAEVSLLKHKWDKSDMHKFARS
LARYPSISVLNLSGGQWKLETFRVLVHFLPKFNITEKTILNDCCLSIKAVIILTTFMSQC
TSVREILIRRKSPSQAMIVFCDGSLSKSLSLSSCRLQPSCLEEVLKSFGQSSALTSLDLS
TNALGDEGIQTLLNGLSFLKRIGEINASNNGVTTEGVTQLAGAFCSHKNLIQVQTSHNGS
QKIWLKFCADERAEELRVFRVNYSSFKPGDVTALCNKLILCHTLFELDLSDSPLKDDTIK
DLVDVLPKMTSLKTLNLNACITSTTGALILVGGVTGCERVKSVQLSSQRESSILFDKKKQ
DHFSCRFSHFSLDRDSLGRLLETLQSGPQLSELDLSNNNLDDKVVKYFVNFLPELKIKNF
INLGNNDLKQQGMLDVADTLTKCDNVSFVEVCLAENPTCIIWFKQCNKQEKHLRITGATL
TPNHQNQLVKIMACCHCPIKLEMKNCFSDSVEEFVEMFESSCVECTVDIEESWIRSEEAV
RLLCDCLERNRNINSISIQQTTLRLNMRNCKGPTQHSVGKTLSLLNLSLVDCGIHGSHLL
LMKDTLQRCLFLTELDLSHNCLGESGAEVLCSVIPTLPKLTSLRVDKDRCVQFVKILCKS
FLQCNNLHYLSLSGYVVNEVVAQMIASVLPRLKSINLSHCSWTQAGALLVISSLAHCQHI
EELCFDYVQLDQESKMCLAQSLQRAKSLSILQLSNIATSSSVLDVLVALKELVHLKILEM
NSWKMSDDEVSQLVKVIPLWTHLQKICLSQTLFNDQSGDKLLEALKNCIHLKELHISRNN
LNDLTAARMALVFPSLTHLCVIDVSENNIGPKGSVDLAKAISCLKNLTKINLTSVGTSEL
CAAVCSLASCPQIQEVRMGWNNCGDDVAQALVRVLSVCQSLEKIDLECNRVSLVGAEALR
EALRSCPALETIRLWKNRISPGDAERISWKDRRLSFSST
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaattgacccagaccaggacaatgccaacattgtcttagatcaggagtac
tcagagctgttgcacatcctcactaatcagccgtcaaccgctcttatgaagttatgtgaa
atggcgtccactgatggtgcagggcaaatcagtaccattaatcccactagttcttctgca
gcagcagtgagaggtttattggacttctacagcaccgcagactcttcactctgcagtgac
tttctccagcgcgtgtgcttgttatgtgagaacatccccatgttgctcgaatcaaggctc
atgtcagtgtctggaaatctaaatgtgcgtgacatatccagattacaagtagcagagtct
ttggaaacgcagatcattaaaagacctcgcattgatccctgggaggagtttattacttca
gtccaagatttgttgaggatgaggtggggagccatgaggaagcagctggtgatgggtgtt
gagctggataatgtgtgggtcggtgtgaggagagcaaacagagccagagaacgaccagac
caaacccctggctctgttgaccaaggcagccgaacccctgttttagatgtggagtgtggg
tctccggaggctacagtgacacttgacatcttccttcaaggcagtatgggaaaagtcact
attgtgtatgggccgcccggatcaggaaagacagttcttatgtctcgtttaggagatctt
tgggcgtataatttgggacatatcccttcatcacacttgtttgttctgctggaattccgc
tacctcaatttattgcccaaaatcctgtctttttatgagctgctgttcctgtattatcca
tctccaccaggaggagaagaggagaagaatgccattttggactatctcctgtctaatcca
gagcaaagttgttgggtcctggatggctatgatgaatttcattacaatattgatgagaca
gacagcaacaatgcccagttggaccccagaagccgccggcctgttgccgagctgatctca
gccttgttacatcggcaccttcttccaggctgcactatagttctcacctgtcgtgtgcgt
gaggccaaagatttacagcacaaagcagagaaagtaggggaactccaaccttggaaccaa
cataagattaaggaatatgttgagcaatactttatacttaaagataatttagctgctggg
aaacacgcaacaaaactgctcttctcaaacaaacaccttgtcgccatgtcgtccatccct
ggtctctgtaatatctcctgcatttgcctcgaatacttacttcaggaaatacaaccaagt
agtgaggacaaattggatgcaaaaaaccacaaagacgatgtacaatcagtgcctcggatg
ccttccaccctcaccaaggtttacctaacaagtattggaacatgtcttaaccgctgtttg
aatcaagaagcaacgagtgccaaagtaaggttttcacaaagggctcttctcccattgaca
agtcttgtgagccactataagtctgaattgattgaactgtatgaactggcctggaaggga
ttagagaccggaaagatcttatttcttgaagatgagattccttacagcatcttagatttt
tcagtaacatcggggttcatttcacagactgaactgagacaggatggagttcttgtcact
gtttatggctttatacatctcactgtgcaagagtttctttcagcactcaaaataatgacc
agcctggatgacaaggagctcagaaacaggctcagtctaaagacccgctggcttagcaag
tcaagccagaaaacagtcttcaccaactcgctccatctgtttctgtcgggtttggcctca
cctccctgtgcagctgtcattgcacttctgaccaaagaggatcacacttttgtccaaaaa
cgtcaagagacagtgacaaaaatgcttcaccaaatgtgtcacgtccacatgactggacca
aaggtgttggagctctgccactgtgtgcaggagacccaggacaacacactttccaaagaa
ctcatgagtgtaaagccccaactagaactgcgcaatatgagcctgtcatcaaacgatcta
gatgctctggcctttgtggtgaactccagtgaggagagaaatattggtttggattttcga
gcatgttcaatcgatctagatggtttgaagctcttatcccaatgtaatacaattacctac
ctcagtttccacagccgcaagtatggagacagttttgctgagaaattatccacagttttg
cccaaatttgtttctttgaaaaaactaagtttctgtggcacacgcgtgactgcaacaggt
gcagctcatctggcttctgctttactgaagtgcacatgcattactgaattagatctcagt
ggcaacaatcttaaagatgatggtacaaaacatgtcactgatatcctctccaagctccca
cagctttcctttgtgaatcttggccaaaacaacacaagtctacaagcagcagtctacttg
acacaagaaacatcttcaatgaacgtccagtgtatttatatcgatggtggcattcaagat
ctaaaagtaacttttgacccaaaccgtgaccggaatagtcataaagctgattctcaggca
gaggtcagtttgttaaaacacaaatgggataaatctgacatgcacaaatttgctcggtca
ctcgcacggtacccgtcaatatctgtgcttaacttgtctggtggtcagtggaaattagaa
accttcagggtacttgtgcactttttgccaaagtttaacatcactgaaaagacgattttg
aacgactgctgcctctcaatcaaagctgtgattattctcaccacattcatgtctcagtgc
acctctgtcagggaaattctcatcaggcggaaaagcccttctcaagccatgattgttttt
tgtgacgggagtctgtcaaaatcattaagcctcagcagttgtcgtctgcagccctcatgt
ctggaggaagttctaaagagttttggacaatcatctgcactcaccagtctagatttgtcc
actaatgctttaggcgacgaaggtatccaaacactcctcaatggcctgtcatttttaaag
agaattggtgagataaatgcaagtaataatggagttacaactgaaggagtcacacagttg
gctggtgctttttgtagccacaagaatctaatacaagttcagacaagtcataatggcagt
cagaagatatggctcaagttttgcgcagatgaacgcgctgaggagctgagagtattcagg
gtgaactacagcagctttaagcctggagatgtcactgcactttgtaacaagctgatcctg
tgtcacacattgttcgagttggacttgtcggacagcccactaaaggatgacacaatcaaa
gacttagtagatgtccttccaaagatgacttcacttaaaaccctcaacttgaacgcctgc
attacatccacaactggagctctgattttggtcggaggagttactggctgtgagcgagtt
aaatcggtgcagctcagttcacagagagagtccagcattctttttgacaaaaagaaacaa
gaccatttcagctgccggtttagtcactttagtctggacagggacagcttggggaggctg
ttagagacactgcagagtggacctcaactgtctgaactggatttgtccaacaacaatctg
gatgataaagtcgtaaaatattttgtcaactttctgccagagcttaaaatcaagaacttc
ataaatttgggcaacaatgacctgaagcagcaggggatgttagatgtggctgacacacta
accaaatgtgacaatgtttcctttgtagaggtttgcttggcagaaaacccaacgtgcatc
atctggtttaaacagtgcaacaagcaggagaaacatctgaggatcacaggggcaactctg
actcctaaccaccaaaaccaattagtaaagattatggcttgttgtcactgtccaatcaaa
ctagagatgaagaactgtttttcagacagtgtcgaagagtttgttgaaatgtttgagagc
agttgtgtcgaatgcactgtagatattgaggagtcctggataagatcagaggaagctgtg
agactgctctgtgactgtctggagcgtaacaggaacatcaactccatcagtatacaacag
acaacattacgcctgaatatgaggaactgtaaaggaccaacccagcactcagttggtaaa
acactttcactccttaatttgagtctggtggattgtgggatacatgggagtcatcttctc
ctcatgaaagacactcttcagcgatgtcttttcctgacagagttagatttatcgcacaac
tgccttggtgaaagtggggcagaggttctctgttctgtcatccccacattgccaaagctg
acttctctaagagttgacaaagacagatgtgtacagtttgttaaaatactttgtaagtct
ttcctgcaatgtaataacctacattacttgagtctctcaggttatgtggtgaatgaagtt
gttgctcaaatgattgcctccgtattacctcgtcttaaatcaatcaatctgtctcactgt
tcctggacacaagctggagccctgctggtcattagtagtctggcacattgtcaacatatc
gaggagctttgttttgattatgtgcagcttgatcaagaaagcaaaatgtgcctggcccag
tcacttcaaagagccaaatcattaagtattctccagctcagtaacatagctacatcatca
agtgtgttagatgtccttgttgcattaaaggaacttgtgcatttgaagattttagaaatg
aacagctggaaaatgtctgatgatgaagtaagtcagctggtgaaggtcatccctctctgg
acacatctccaaaaaatctgtttgtcccagaccctttttaatgaccaatcgggcgacaaa
ctgctagaggcactgaagaactgcattcatctgaaggagcttcacatatcacgcaacaac
ctgaatgatctcactgcagcaagaatggcccttgttttcccatcactgacccacctctgt
gtgattgatgtttcagaaaacaacattggacctaaaggttctgtagatttggctaaagcg
atatcctgcttaaagaacctcaccaagattaatctgacctctgttggaacatcggagctg
tgtgcggctgtttgcagtctggccagttgtccccagatacaggaagtgcgtatgggatgg
aataactgtggtgacgatgtggctcaggctctggtcagagtgctgtctgtttgccaaagt
ttggaaaaaatagatttggaatgcaaccgtgtgagtctcgttggtgctgaggccctaaga
gaagctttgcgatcttgtcctgcgctggagacgatcagactgtggaaaaacagaatatca
cctggtgacgcggagaggatcagttggaaggacagaaggctcagtttctcctcaacatga
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integrated database retrieval system
