Eucyclogobius newberryi (tidewater goby): 140349497
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Entry
140349497 CDS
T10929
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eny03000
]
140349497 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eny03310
]
140349497 (roraa)
Transcription factors [BR:
eny03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
140349497 (roraa)
Nuclear receptors [BR:
eny03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
140349497 (roraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
140349497
NCBI-ProteinID:
XP_072291955
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MESPPDPASDPSNGASEPATPLRETPVNLETLRKADHPAPVRRQTCSSTNRGISVAKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQAQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPIC
DFAPGSGFFPYCSFSNGDSSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFLQ
EEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF
VRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEMALFSA
FVLMSAGLVLSLTDRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLR
ALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQAMPVDG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccaccagatcctgcgagcgacccgagcaacggcgcctccgagccggctacc
ccgctcagggaaaccccggtgaacctcgagacgctccggaaagcggaccatccggcgccg
gttcgaaggcaaacgtgctccagcaccaacagaggtatctcagtagcaaagaagacgcac
acttctcaaatcgaaataattccctgcaagatttgtggagacaaatcatcaggcatccac
tatggcgtgatcacatgtgaaggctgtaagggctttttccggaggagtcaacagagcaat
gcggcctactcctgccctcgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgtcggctccagaagtgcctggccgtgggcatgtcccgggatgcggtgaag
tttgggcgaatgtcaaagaagcagcgcgacagcctgtatgcagaggtgcagaaacaccgg
ctccagcaagcgcagcgtgaccaccaacagcagccgggggaggccgagcctctcacgccc
agctacggcctatcagccaatgggctgacagagctgcacgatgaccttagcggctacatg
gatggccacacccctgatggcaaaccggactctgcagtcagcagcttctacctggacatc
cagccatcgcccgaccagtccggcctggacatcaacggcatcaaaccagagcccatctgt
gactttgcccctggctccggcttcttcccctactgctccttctctaatggagacagttcc
cccaccgtgtccatggctgaactggagcatttggcccagaacatctccaagtcacacatg
gaaacgtgtcaatatctgagggaggaactgcaacagatgacctggcaggcatttctgcag
gaggaggtggagagctaccagagcaagcctcgggaagtcatgtggcagctgtgtgcgatc
aaaataacagaagccattcagtatgtggtggaatttgccaagcgcatcgacggcttcatg
gagctgtgccagaatgatcagatagtgctgctgaaagcaggttctttggaagtggtgttt
gtcagaatgtgtcgtgcctttgactcacaaaacaacacagtctactttgatgggaagtac
gctggacccgatgtcttcaagtctttaggctgtgacgacttgatcagctccgtcttcgag
tttgggaaaaacttgtgttctatgcacctgtctgaggatgagatggccctgttctctgcc
ttcgtgctgatgtctgctggtttggttctgtccctcacagaccgctcctggctccaggag
aaggtgaaggtggagaagctacagcagaaaatccagctggctttgcagcacgttctgcag
aagaaccatagagaagacggcattctcacaaagttgatatgcaaagtgtcgacactgcga
gcgctttgcagcaggcatacagagaagctcacagctttcaaagcaatatacccagacatt
gtgcgcgcccacttcccgcccttatacaaagagctgttcggctcggactttgagcaggcc
atgccggtggacgggtag
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