Eucyclogobius newberryi (tidewater goby): 140351503
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Entry
140351503 CDS
T10929
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eny03041
]
140351503 (ddx43)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140351503 (ddx43)
Spliceosome [BR:
eny03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140351503 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
KH-I_KHDC4-BBP
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
140351503
NCBI-ProteinID:
XP_072293454
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSDWEEEERGVESHTNKTYKTNKPAPAVWDVPCKGRDREHVSFGVKSASRFVTPRGDGRS
DGPWERSWGSERPPSRGRDHGAPFRRPFSDGAESSAVTFTVDIALVGRVIGRGGSKIREL
EEISGARIKINKGEYEGEVSLLGSPSAQQKAKKMIEELVSDGNSNGSFSEGNDCGGGDGS
FWSSSQLSAAEVAPVRPQIDWNAIRENKEKFEKLKWEGLPPLKKHFYKEAESVSMRTAEE
VSEWRKENNNIFVDDLKEEGEKRQIPYPCRTFLETFEFYPEIMENIERVGFVMPTPIQCQ
AWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPLPKSERGGPGMLVLTPTRELALQ
IEAECGKYQFKDYKSVCIYGGGDRRGQINLVKCGVDIVIATPGRLNDLQMNELINLRSIT
YLVLDEADRMLDMGFEPQILKIILDIRRDRQTVMTSATWPTGVRRLAKSYLKNPMMVYVG
TLDLAAVNTVEQNIVILTEEEKKAFLFDFIRNMKPNDKVLVFVGKKIVANDLASDMCLKG
LAVQSLHGDREQCDREEALKDFKESRVRILVATDLASRGLDVTDITHVFNYDFPRNIEEY
VHRVGRTGRAGRLGTAVTLVTRDNWRMARELIHILERAGQEVPTELVVMAERYEKYKRER
EMFPREARGGGRGGGWRGGGGRSRRDQEQNFGF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaagaagaggagcgcggcgtagaaagtcacacaaataagacctataag
acaaataaacctgctcccgcggtgtgggacgtgccctgcaaaggacgggacagagaacac
gtttcattcggtgttaaaagtgccagcagatttgtgaccccgcgtggtgacggacggtct
gatggcccctgggagcggagctgggggagcgagaggcctccaagccgcggccgggaccac
ggagctccttttcggcgaccttttagcgacggagccgagtccagcgccgtgacctttact
gtggacattgctttggttggtagagtcatcggacgaggagggagcaaaatccgtgaactt
gaagaaatctctggtgcaagaatcaagattaataaaggagagtatgaaggtgaagtgtcc
ctccttggctccccctctgcccagcaaaaggccaagaagatgattgaggaacttgtgtca
gatggtaacagtaatggtagcttttcagaaggaaatgactgtggaggaggagatggttct
ttttggtcaagttcccagttgtcagctgcagaagtggctccagtccggccgcagattgac
tggaacgccataagggaaaacaaggagaagtttgagaaactcaaatgggagggtcttcca
ccattaaaaaaacacttttacaaagaggccgaaagtgtgtccatgcggactgctgaagaa
gtcagtgaatggaggaaagaaaacaacaatatatttgtagatgacctaaaggaggaagga
gaaaaacgtcagattccttatccctgtcgtactttcttggagacttttgagttttatcca
gaaattatggagaacatagagcgtgttggttttgttatgccaacccctatacagtgtcaa
gcatggcctgtgttgctgtctggagaagacctcattgccattgcacagacaggaacagga
aaaacactggcatatctgctgcccggctttattcatatggatggacagcctcttccaaaa
tctgagcgaggaggtccgggtatgttggttttaacccctacaagagagttggctttacag
attgaggcagaatgtggcaaataccaattcaaggactacaagagtgtctgcatttatgga
ggaggagacagacggggtcagatcaacctggtcaaatgtggagtggatattgtgattgct
acaccaggccgactcaatgatctacagatgaacgaactcatcaatctacgctccatcacc
tatttggtccttgatgaagccgaccgaatgttggacatgggttttgaaccgcagatattg
aaaattatcctagacatcagacgggatcgacagactgttatgacgagtgccacttggccc
actggagttcgacgactggccaaatcatatctgaagaaccccatgatggtttatgtaggc
acactggacttagcagctgtcaacactgtggagcagaacattgtgattctcactgaagag
gagaaaaaggctttcctatttgattttatcagaaacatgaagccaaatgataaagtcctt
gtttttgttggcaaaaagattgtcgctaatgatctggcgagtgacatgtgtctgaagggt
cttgcagttcagagtctccatggtgaccgtgagcagtgtgaccgtgaagaagcactcaag
gattttaaagaaagcagagttcgtatcctcgtggccactgaccttgcatctcgggggttg
gatgttactgacatcactcatgttttcaactatgacttccctcggaacatagaggagtat
gttcatcgtgtgggtcgcacaggccgagctggacgattgggtactgctgttaccttagtg
accagagacaactggaggatggcccgagagttgattcacattctcgagcgagctggacag
gaggtccctacagagttggtggtgatggcagaaaggtatgagaagtataagagagagagg
gagatgtttccacgagaggcacgtggaggaggaagagggggaggctggagaggcggtgga
ggaagaagtcgcagagatcaggagcaaaactttggattctga
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