Eucyclogobius newberryi (tidewater goby): 140351625
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Entry
140351625 CDS
T10929
Symbol
col17a1b
Name
(RefSeq) uncharacterized protein col17a1b
KO
K07603
collagen type XVII alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140351625 (col17a1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
140351625
NCBI-ProteinID:
XP_072293635
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MDFSTGMSEERVVTESVTSSSRLASLPPKGTGGSNHRIMSSGAGGLGLEKNVLTQNSSGT
YFSSSSVGVSSSTYASSSGVYLSGDSSGGGDGVGGFLDVEGYGRSGGGGGGGSYMVSSSS
VSKVRSSSSNGGGRRTQISSSTGGLSPSTFRERKTVSSRSGGYDGSSSANSSPEFTRKDY
GNYCAGSSRGRSESRESEIRARLQSASPSASRWTELDDVKKLLKGRSSSVSPTRSSSASI
SLPVPKKTMAEPKTVSVATQSVSSMYDAGLRSDQFVDATGLYDNAVSFGQYGGSVKSGQY
DSGLKSSAYGVRSGQYDSGVKAGTYGGSVTSGQFDTMNGYKSSQYDMSLRSGHYDLGLKT
DHYGSAVKSGHSTVRSAQYDNATVDAALPAFTWSTATLPSSPAAAPAIATSYSYQVSANN
MGGSVPLSPASPSSLSVYGFQNNLGPTSGSVLTTSGANTTSASLGGYGVQKNMSSAAVIG
SAASTATRSQTEESFKRFVAADRENLAAKRDGETLILAKDSGKQFTSGSSVHIGGGSLSG
DSIKKEKLISSYGETAQLKANLGHSYYGSTGVLMKDKATYAEIRRDSGVFGGGGFCCCSD
SCCSWWKWLLGLLLLSLLLLGLLFGLIALAEDVRKLKNRVTSLESESAAISARTSRFSGG
NEIYTGTGDTNLHVGAGGAGTGTDTRVGVGVGAGGGAGGGTAGGSTSGTSGASSGVAVIG
GGGAAGGAAGGAGGAGGAGGGAGGGTGAGNTYIYFGAGGAGTSGGAGAGTITDTRYTDSS
SSSGTSYSSGSTGYSGGSAGATGFTWSGGQLDAATLQLAIQHMLRSELQSQAFKAYLASS
VQAERGQPGPKGDPGLKGETGYPGIPGPMGHGGPEGPKGQKGTMGEGGPEGPSGIRGREG
PPGPRGEPGPHGFGEKGDKGAGGEPGVPGIMGPVGPKGLAGSQGNSGPPGVQGFRGEPGL
SGQKGDRGLPGFQGLKGESGDKGPRGLPGDVGVPGAPGSAGEKGHKGSMGLSGQDGAKGS
RGDQGPVGPTGLRGPAGPPGDAGLSGQPGLQGPPGIAGIPGHPGGKGEPGAPGRIINAAG
SSSVGIPGPPGPSGPPGPAGPPGLSGPIGPAGLPGQTGPKGDRGDQGEPGVTVKTSESIS
SSRTQSQYTAGGGSGVSGPPGPPGPPGRPGDSRQGPPGPPGPAGPPGSGRPGPKGDRGEA
GFASGSGTTYYTGPPGPPGPPGQKGSAGTPGPRGEPGNTLSYSGVQTVQGPPGPPGQPGR
QGPQGIKGDPGVPGIPGTSRGSVSVTAGPPGPPGPAGPPGQSGSYTSSEIRQYITDYISR
SSQFAGQGPPGPPGPPGAPGSYSGSLEDLSVRIIAYLQRSSSSVRIGVPGPPGPPGPPGQ
GSLTVTSLIALLQRDDVRRFVIGPPGPQGPPGPSGATVEGSYGGYSIEQIATYVIKLITD
RGLARGPPGPPGPAGPGSSGYTTATIDYSALMRDSEFRSWMNSALQHTTSGPPGTPGLPG
PPGPQGPPGVSTSTVYGSGGRSYSFEDIQRYIQTSGIQGLPGPPGPPGPRGPPGSYSGSV
SYSGNFPRESIRTELQQYLSSESVLRSIMGPPGPKGEKGDRGEPGYIRSQTQSQSFSQGD
SRYGTHGTQIKEIDISGLTETLDYSNVALKVTDYIKNQGLLQEYLVDGSSRTQVRAIQGP
PGPPGPPGPTGYSRVLASYGNITADLMDFFRAHGTIPGPVGPSGPRGERGYPGPKGERGY
AGQPGQPGLPGPYTIRVPHTLQKRDTAKKVHGLRHKDLRSADGA
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggacttctccacaggaatgtccgaggagagggttgttacagaaagcgttacatcttcg
tccagactggcttctctcccaccaaagggaaccggtggatcaaatcacagaattatgtcc
agtggtgctggcgggctgggcttggagaagaatgtcttaacccagaacagcagtggaact
tatttctcttcatcctcagtgggggtgagcagcagcacgtacgcctcctcctcgggggtc
tacctgagcggggactcctcgggtggcggtgacggcgtagggggctttctggatgtggag
ggctatggcaggagtggaggaggaggtggaggaggcagttacatggtcagctccagctcc
gtgtccaaggtgaggtccagcagctccaacgggggaggcaggaggacacagatctccagc
tcgaccggaggactctcgccttcgaccttcagggagaggaagaccgtgtccagccgctcc
ggaggttacgatggaagttccagtgcaaactcctctcctgaatttacacgcaaagattat
ggaaactattgcgctggcagctcgagaggaagaagtgaaagcagagagagtgagatccga
gccaggctgcagagcgcttctccctcggcctccagatggacagagctggacgacgtgaag
aagcttctcaagggccgttcgagcagcgtgagcccgacccgctcctcctccgcatccatc
tctctgcctgtgcccaaaaagaccatggccgagcccaagaccgtgtccgtggccactcag
tcagtttccagcatgtacgacgctggcctgagatcggaccagttcgtggacgccacgggc
ctttacgacaacgccgtctcattcggacagtacggcggcagcgtcaagtcgggccagtac
gactcgggcttaaaatccagcgcgtacggcgtcaggtcgggccagtacgactcgggggtt
aaagcaggtacgtacggcggcagcgtcacatccgggcagttcgacaccatgaacggctac
aaatccagccagtacgacatgagtctgcgctccgggcattacgacctgggcctgaagacg
gaccactacggctcggcagtgaagtccggtcactccactgttcgctcggcccagtacgac
aacgctacagtggacgctgcgctgccggcgtttacgtggtccaccgccaccctgccctcc
tctcctgctgcggccccggcgatcgccaccagctacagctaccaggtcagcgccaacaac
atgggggggtctgtgccactcagccccgcgtctccatcatcactgtcagtgtatggtttt
caaaataatttggggcccacatcaggcagtgtcctcaccaccagcggagccaacaccacc
agtgccagtctgggaggttatggagtgcagaagaatatgtccagcgctgcggtcattggc
tctgcagcttccacagcaaccagatctcaaactgaagaatcctttaagaggtttgtggct
gcagatagagaaaacctagcagccaagagggatggggagactctaatcctggccaaagac
agtgggaagcagttcacaagtggcagcagtgtgcatatcggaggaggctctctgtctgga
gactccatcaagaaagagaaactcatctcaagctacggagagacggctcagcttaaggcg
aatcttggccactcctattatggaagcactggagtgttgatgaaagataaagccacatat
gcagagatccgtcgggacagtggggtttttggaggaggcgggttctgctgctgctctgat
tcgtgctgctcgtggtggaaatggctcctgggactcctccttctttcccttctccttctc
ggacttctgtttggtctcattgctctggcggaggacgtgagaaagttaaagaaccgtgtg
acttcgctggagtctgagtctgccgccatttccgctcgcacaagtcgcttttcgggcgga
aacgaaatctacacgggcaccggcgataccaatcttcacgtaggagccggaggggcgggg
actggcacagacacacgggtaggagtcggagtcggagctggtggaggtgcaggaggagga
acagcggggggcagtacttctggaacaagtggtgctagtagtggagtggcggtgatcgga
ggcggtggagcggcaggtggagcggcaggtggtgctggaggagctggtggagctggtgga
ggagcaggaggaggcactggagcagggaacacctacatctactttggcgctggaggagca
ggcaccagcggaggagcaggggccggcactatcacggacaccaggtacacggacagcagc
agcagcagcggcaccagctacagctcgggctccaccggctacagcggaggcagcgcaggg
gccaccggcttcacctggagcggaggacaactggatgcagccactctgcagttggccatc
cagcacatgttgaggtctgagctgcagtcacaagcgttcaaggcgtatttagcgtcatct
gtacaagcagaacgggggcaacccggacctaaaggggatccaggattgaaaggagaaaca
ggttatcccggaattccaggtcccatgggtcatggtggtcctgagggtcctaaaggccaa
aagggaactatgggtgaaggaggaccagaggggccatcaggaattaggggccgcgaaggt
ccaccaggtcccagaggcgagccaggaccccatggctttggagagaaaggagacaaaggt
gcgggtggagaacctggtgttcctggaattatgggcccggttggaccaaaaggcttagct
ggatctcagggcaacagtggacctccaggtgtgcaaggattccgtggagaaccgggatta
tcaggacaaaaaggtgacaggggccttcctggattccaagggctgaaaggtgaatcaggc
gacaagggtcccagaggtctgccaggtgacgttggtgtacctggtgcacctggatcagct
ggagagaagggacacaaaggatcaatgggtctttctgggcaagatggtgcaaaaggctca
agaggtgaccaaggccctgttggacctacagggctccgaggccccgctggccctccagga
gatgccggtctgtcaggtcaacctgggcttcaaggaccaccaggaattgcaggaattcca
ggacatcctggaggcaaaggtgaacccggtgccccaggaaggatcatcaatgcagctggt
tctagctctgtggggatcccaggaccccccggcccctctggcccacccggccctgctgga
cctccaggattatcaggtcccattggtcctgctggtcttcctggccaaactggtcctaaa
ggtgacagaggcgaccaaggggaaccaggagtaactgtgaaaaccagtgaaagtatcagc
tcaagtagaacccaaagccagtacacagcagggggagggtctggagtatcagggccccct
ggccccccaggaccacctggacgtccaggagattcaagacagggtccacctgggcctcct
ggtccagctggcccgcctgggtctggtagacccggacctaaaggagacagaggagaggca
ggctttgcttccggctcaggtacaacatactacaccggaccacctggtccacctgggccc
ccgggacagaagggatcagcaggtaccccaggaccaagaggtgaaccaggaaacacactt
tcttacagtggggtgcagacagtgcagggcccaccaggcccaccaggacagcctgggcgt
caggggccacagggcatcaaaggcgatcctggagtccctggtattcctggcacatccaga
gggtcagtgtctgtcactgccggcccacctggtcctcctggacccgcaggaccacctgga
cagtcaggctcgtacacttccagtgaaatacgccagtacatcactgattacataagccgc
agcagtcagtttgctggacaaggacctccgggccccccagggcctcctggtgcccctgga
tcctactctggctcccttgaggacctgtctgttcggataattgcatacttacaacggtca
agttctagtgtgagaatcggtgtaccaggtcctccaggaccacctgggccccctggtcag
ggctctctgacagtcacctccctaattgcattgttacagagagacgatgtgaggaggttt
gtgataggaccaccaggcccacaaggaccacctggaccctcaggagcaacagtcgagggg
tcttatggtggttacagtatagagcaaatagccacttacgttatcaaactcataactgac
agaggtctcgctcgaggaccgccaggaccacctggacccgcaggtcctggaagctcagga
tacactacagccaccattgattactctgcacttatgagagattcagagttccgctcctgg
atgaactctgctctacagcacacaacttctggacccccgggtacaccaggactacctgga
ccccctggaccccagggaccccctggagtgtccacctccactgtgtatggttcaggaggt
cgcagctatagctttgaggacatccagagatacatccagacttctgggatacaaggtttg
ccagggcctccaggtcctccaggcccacgaggaccaccaggcagttacagtggctccgtc
agttacagtggaaacttccctcgggagagtatccgcactgaattgcagcagtatctgtcc
agtgagagtgtccttcgctccatcatgggccctccggggccaaaaggagagaagggagac
cgtggagagccaggttatatccgtagccagactcagagtcaaagcttctctcagggtgat
tctcgttatggcacccatgggactcagattaaagagatcgacatcagtgggctcacagag
actctggactattctaatgtggccctgaaggtcacagactacatcaagaatcaaggcttg
ctgcaggagtatctggtggatggctcttcgcggactcaagttcgagctattcagggcccc
cctggtccaccaggcccccccggccccacgggatacagccgtgtcctggcctcctatggc
aacatcactgctgacctgatggacttcttcagggcacatggcaccatcccaggccctgta
ggtccatctggtcccagaggggaaaggggctacccaggacccaagggggagagaggttat
gcgggacagccaggtcaaccgggactaccagggccatacacaatacgagttccacacact
ctccagaagagagatacagctaaaaaagtgcatggtcttcgtcacaaagaccttcggtca
gctgacggagcctga
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