Eucyclogobius newberryi (tidewater goby): 140353015
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Entry
140353015 CDS
T10929
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140353015 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140353015 (clp1)
Enzymes [BR:
eny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
140353015 (clp1)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
140353015 (clp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
TniB
ATP_bind_1
AAA_22
AAA_16
AAA_18
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-GeneID:
140353015
NCBI-ProteinID:
XP_072293890
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MATEVLENPVEDVPPGKVGTRFDLEKETELRFEVESGDGAEQVEMELLSGMAEVFGSELN
RNKKYTFGPGAKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHAALEQMRKQAEKD
NERGPRVMIVGPTDVGKSTVCRLLLSYAVRVGRRPTFVELDVGQSGVSVPGTVSALCIER
PADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIINT
CGWVKGSGYQALVHCASAFEVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERSK
ECRRDTRDEKIREYFYGFRGITFYPFSYEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDTQ
LKLVPVTPGRDLTYHVLSVSSADDGEDGVRKGIVETPVCGFIVVTNVDTQTQVMKVLSPA
PRPLPRHTLLIMDIRFMDMK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggttttggaaaacccagttgaggacgtcccgccaggaaaggtcggcacc
aggttcgatctggagaaggagactgagctcaggttcgaggtggaatcgggcgatggagct
gaacaagttgagatggagctgctctctgggatggcggaggtgttcggttcagagctcaat
cgaaacaagaagtatacatttggtcctggtgctaagatcgctgtgtttacctggcaaggg
tgtagtgtaaatctgtatgggaaaccagaggtggcttatgtctctaaggacaccccgatg
ttgctttacctgaacacccatgctgcactggagcagatgagaaaacaagcagagaaggac
aatgagagaggaccaagggtaatgattgtgggccctactgatgtgggcaagtcaacagtc
tgtcgtctgctcctcagctacgccgtgagagtgggaagaaggccaacatttgtggagctg
gacgttggtcaaagtggggtgtctgtacccggaacagtgtctgctctatgcattgaaagg
ccagccgatgttgaggagggtttttcagttcaggctccactggtgtaccactttggatca
accacccctggaacaaacatcaaactttacaacaagttaacatcttgcttagctgaggta
ttttcacaacgctgtgaggtgaacagaaaggcaagtgtgggaggatgcatcatcaacacc
tgtggatgggtgaagggctctggataccaagctctggtgcactgcgcttctgcctttgaa
gttgatgtggtgttggtacttgaccacgagaggctctacaatgaactaaaaagagacctt
ccccactttgtcagagttgtgctccttcccaaatctgggggagttgtggagcgatccaag
gagtgccgccgcgatacgcgcgatgagaagatccgtgaatacttttatggcttccgtggc
attaccttttatccattctcttatgaagtgcgcttctctgatgttcggatctacaaaatt
ggagcgccatcaatcccggactcatgccttcctctaggaatgtctcaagatgatacacag
ttgaagttggtgccagtaactccagggagagatcttacatatcatgtgttaagtgtaagt
agtgcagatgatggcgaagacggggtaaggaagggtattgttgagaccccggtgtgcggt
tttattgttgtgacaaatgtggatactcaaactcaggtgatgaaagtgctctcgccagct
ccacggcctcttccaagacacacactgctgataatggacattagatttatggacatgaag
tag
DBGET
integrated database retrieval system
