Eucyclogobius newberryi (tidewater goby): 140353685
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Entry
140353685 CDS
T10929
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eny03009
]
140353685 (ddx10)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140353685 (ddx10)
Ribosome biogenesis [BR:
eny03009
]
Eukaryotic type
90S particles
Helicases
140353685 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
140353685
NCBI-ProteinID:
XP_072294459
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MEKKGSNSTGKKSKPAKMAAGTDPVKNFEKWKKKYNKTKKRVKFERLREKKPEWQVEKEY
INKLVSRYEEINSKEAVKFSDFPLSKKTLLGLQEAQYRQPTEIQRQTIGFALRGKDVLGA
AKTGSGKTLAFLIPVLECLYRQQWSSVDGLGALIISPTRELAYQTFEVLRKIGKNHEFSA
GLVIGGKDLQSEMERIHQTNIVICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGF
ADTLNAIVENLPKSRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQSY
VVCELHQKVDMLFSFIRSHLKKKVIVFFACCKEVQYFFRAFCRLRPGIPVLSLHGKQQQM
KRVEVYNDFVRKQNAVLFATDIAARGLDFPAVNWVLQMDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEERMVQMLQDKKVPITKIQVNPEKLQSVGQKLEAFLAQETAMKERAQRC
FVSYLRSVYLMKNKHVFDVNKLQLHEYAQSLGLAVAPRVRFLNKTPGQTKESKARKSDAE
EDEELRKFKQQLEGDVEENAQSDSGSTDNEESDADDKIALGEADEDEDLRDLDLLTVKRK
DVFKLKEGQEEEDEEEELNGKKQNKESKFKEAKKVLKRNFQVNTKVKFSEEGEAVQLWPP
VQRAATRANNDEEEDDETSGINVEKAKERLKKEDQEFDKEEYRRKVKEKHREKRLKDKAA
RRDASKKNRRDDEEEDEVVAYLANESDDEFDPSTLPDPDKSDHSGNDEEEDEGEEERTNV
AKRKPSSESESESEDEEEEEDKPTKKRLKVQRQDEEEDTALDTGLSLAEDEELVLHLLSG
GR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaggctcaaactcgaccggtaagaaatcaaagcctgcaaagatggcagcc
ggaactgatcccgttaaaaactttgaaaaatggaagaaaaaatacaacaaaactaaaaaa
cgagtgaagtttgaacggttaagggagaagaaacccgaatggcaggttgagaaggagtac
attaacaagcttgtgagcagatacgaggagataaactctaaagaagcggtgaaattctcc
gactttcccttgtcaaagaagaccctgctgggtctgcaggaggcgcagtaccgacagccc
acggagatccagcggcagaccatcggcttcgctctgcgggggaaggacgtgctcggagcg
gccaaaacaggctccggcaagaccctggccttcctcatcccggtgctggagtgtctgtac
cggcagcagtggagctccgtggacggactgggagctctgatcatatccccaaccagagag
ctcgcctaccagacctttgaggtgttgcgtaaaattggcaaaaaccacgagttctcggcc
ggcctcgtaatcggaggaaaggacctgcaaagcgaaatggagcgtattcaccaaaccaac
atcgtaatctgcaccccggggcgactgctgcagcacatggacgaaacggccactttccac
gcctcggacctgcacatgttagtcctggacgaagccgaccgcattctggacatgggcttc
gccgacacgctcaacgccattgtggaaaacctgcccaaaagtagacagactctgctcttc
tcggccactcagaccaagtcggtgaaagacttggcccgcctcagcctcaaagacccagag
tatgtttgggtgcacgagaaggcgaagttcagcacgccggccacactagagcagagctac
gtggtgtgcgagctgcatcagaaagtcgacatgctcttctcgttcatcagaagccacctc
aagaagaaagtaatcgtgttcttcgcctgctgcaaggaagtgcagtatttcttcagagcg
ttttgtcgcctcagacctggcatcccggttctgtctcttcatggtaaacagcagcagatg
aagcgagtggaggtgtacaacgactttgtgagaaaacaaaacgccgtgctttttgccacc
gacatcgcggcccgaggtttggatttccctgccgtgaactgggtcctccagatggactgt
ccagaagacgcagacacttacatacacagggtgggacggaccgcgaggtacaaggaggga
ggagaggcactgctcctgctgctgccctcagaggaggagaggatggtccagatgctgcag
gacaagaaggttccaatcactaagatccaggtgaacccagaaaagctgcaaagtgttggg
cagaagctggaggccttcttggctcaggagacggcgatgaaggagcgcgctcagaggtgc
tttgtgtcctacctgcgctcagtttacctcatgaaaaacaagcacgtgttcgacgtaaac
aaactgcagctgcacgagtacgcgcagtccctcggcctcgccgtggcaccgagggtccgc
tttctcaacaaaaccccgggacagactaaagaaagtaaagcccggaaatccgacgcagaa
gaggacgaggaactgaggaagttcaagcaacagctagaaggagacgttgaagaaaatgcc
caatctgactctggctccacagacaacgaagagagcgacgcagatgacaaaatagcctta
ggggaagctgacgaggacgaggatttgagagacttggacttgctcacggtaaaacggaaa
gatgtctttaagctcaaagaagggcaagaagaagaagacgaggaggaagaactgaatgga
aagaaacaaaacaaagaaagcaagttcaaagaggccaaaaaggtgcttaagagaaatttc
caagtgaatactaaagtaaaattcagcgaggaaggcgaggctgtgcagttatggcctcca
gtccagagagccgcgaccagggccaacaacgacgaagaagaagatgacgaaacatcggga
attaatgtcgaaaaggccaaagaaagactcaaaaaggaggatcaggagttcgacaaggaa
gagtacaggcgaaaggtgaaggagaagcacagggagaaaaggctcaaagataaagcggct
aggagggacgctagcaagaaaaataggcgtgacgacgaggaagaggatgaagtggtggcg
tatttagccaacgagagtgacgacgagtttgacccaagcacgctgccagatccggataag
tcggaccattctggtaacgatgaagaggaggatgaaggcgaggaggaaaggacgaacgtg
gcaaaaaggaagccaagtagtgaaagtgaaagcgaaagtgaagacgaggaagaagaagaa
gataagccgacaaaaaagaggctcaaagtgcagcgtcaggacgaagaggaggacactgct
ctggacactgggctctcactggcggaggatgaggagttggtgttgcatttgttgtctggg
ggaagataa
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