Eucyclogobius newberryi (tidewater goby): 140353770
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Entry
140353770 CDS
T10929
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eny04121
]
140353770 (rlim)
Enzymes [BR:
eny01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140353770 (rlim)
Ubiquitin system [BR:
eny04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140353770 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
MecA_N
Motif
Other DBs
NCBI-GeneID:
140353770
NCBI-ProteinID:
XP_072294606
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MEGSDSTDQGSSDQPESQRRNQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELISRLQQIKDGLDQQNNAASLQNGEDVGADPPANPEEPVNGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAVDGEQVAAEGQEEAVENADPPAP
METDVVEEPVVEDLAVIVEPEPEQVTQHVLQEPPSSAVGAVVQTPPSPSPPSPSPPSPSP
PSPSPPSPSPPALSPPAPSPPSPSSPSPPSPSPPSPSPRRGQRRPRSRSPEPRRTRARTA
RSRSPLTLELPYVLPTLHNNPSTQSSNSVNPNPPIPQIEGSSRTRQHISARQSPIDEGVH
PPHQASAGPVAEPTNPESQEGEAAAGDGSATGRRPPTIMLDLQVRRVRPGEYRQRDSIAS
RTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMA
LQSMIRQIMTGFGELGYLMDSDSDSTDSNRGINTPSDMAEADLTNGEAPSAGAPAATDGD
QQSAPDGARARTVEGNSDEGDAPPAAGGRARPRPPISFEEPSSLPFLRLAHFFLLNDDDE
DQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLS
ENSTCPICRRAVLVSANRESVV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatcagacagcacggatcaaggtagtagtgaccaaccagagtcccagcggaga
aatcagcttgaccgtctggacagagaagaggctttttaccagtttgttaataacctcagt
gatgaggactaccgtcttatgagagacaacaatcttctggggacaccaggtgaggtgacc
gaagatgagctgatcagtagacttcagcaaataaaagatggtctggaccaacagaataat
gctgcaagtttacagaatggagaggatgttggcgcagacccaccagcaaacccagaggag
cctgtaaatggagatagtcttctagactggctcaacacagtgaggcgcacaggcaacact
acaaggactggtcatcgtgggaatcagtcctggcgagctgtaagtcaaaccaatccaaac
agtggcgactttcgcttcagtctggaaatcagtgtaaaccgtaacttggctgtggatggt
gagcaggtggctgcagagggtcaagaggaagcagtggaaaatgcggatcctccagcacct
atggagacagatgttgtagaagaaccagtggtggaggatttggctgtgatcgtggaaccg
gagcctgaacaagttacacagcatgtacttcaagaaccaccttcatcagccgtgggtgct
gttgtacaaactccaccgtcaccttctccaccgtcaccttctccaccgtcaccttctcca
ccgtcaccttctccaccgtcaccatctccaccggcactttctcccccggcaccttctcca
ccgtcaccttcttcaccttcgccaccgtcaccttctccaccgtcaccttctccacgcaga
ggacagagaagaccccgtagtcgcagtcctgagcctcgcagaacaagggcacgaacagca
agaagtcgttcccctctaacacttgagctgccatatgttcttccaaccttacataataac
cctagcacccaaagctcaaattctgttaatcccaatccacctatacctcagattgaggga
agttcccggactcgacaacacatttctgccagacagagccccattgatgaaggtgttcac
cccccccaccaggcttcggcaggacctgttgctgagcccaccaaccctgaatctcaggag
ggggaggctgctgctggggatgggagtgcaacaggccgtcgccctcccaccattatgctc
gatctccaggtgcgccgcgtgcgtcctggagagtatcgccaaagagacagcattgcaagt
cgcactcgctctcgctctcagaactcaaacaatacctttctttatgaaagcgagcgtggt
ggtttccgcaggactttctctcgttctgaacgggctggtgtcaggacttatgttagcacc
attcgcatccctatcaggcgaatctctgatgcaggtttaggagaggctacatctatggca
ctgcagtctatgatacgtcaaattatgactggttttggggaacttggctacctcatggat
tctgactctgattcaaccgattcaaatcgtggtataaacacaccatcagacatggctgaa
gctgacctcaccaatggagaagcacccagtgctggtgcccccgctgcaactgatggtgac
cagcaatctgcgcccgatggggcccgagcacggacagttgagggaaattcagatgaaggc
gatgctcctccagctgctgggggtcgggcaagacccaggcccccgataagctttgaggag
cccagttctcttcctttcctccgcctcgcccactttttccttttaaatgatgatgatgaa
gaccaaccccaaggactaaccaaagaacagattgataacctctccatgcgcaactttggt
gagagtgatgctctaaagacttgcagtgtttgcattacagaatatgcagaaggcaataag
ctccgtaagttgccctgttctcatgagtaccatgttcactgtattgatcgttggttgtca
gagaactccacgtgtcccatttgccgtagagctgtcctggtgtcggccaatcgggaaagt
gtggtttag
DBGET
integrated database retrieval system
