Eucyclogobius newberryi (tidewater goby): 140353917
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Entry
140353917 CDS
T10929
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03013
Nucleocytoplasmic transport
eny03015
mRNA surveillance pathway
Brite
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
140353917
5.6.2.5 RNA 5'-3' helicase
140353917
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
140353917
mRNA cycle factors
Common to processing body (P body) and stress granule
140353917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
140353917
NCBI-ProteinID:
XP_072294812
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFDFTDFTLPSQTQTQGHTQSQLDAQWYC
PDNGLHNGGVEDPVAKTTQLLQELNFEEDEEDAFCTKDLPVHACSYCGIHVPDCMVYCNT
SKKWFCNSRGNMSGSHIVNHLVRAKCKEVTLHKDGPLGEMVLECYNCGCRNVFLLGFIPA
RADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITA
QQINKLEELWKDNPGASLEDLEKPGVDEEPQQVLLRYEDAYQYQNVFGPLVKHEADYDKK
HKELQTQDSITIRWDLGLNKKRKAYFILPKMDTGDMKLLPGDEISLSYKGDLGPPWKGIG
HVIKVPDNYGDEIAIELRSGANAPVPITRNFQVDFVWKSTSFDRMQSALKTFAVDETSVS
GYIYHKFLGHEVEDVTIKCQLPKRFTAQGLPDLNFSQVYAVKTVLQKPLSLIQGPPGTGK
TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF
LALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCV
GAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA
GLTRSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQ
WPQPDKPMFFYVTAGQEEIASSGTSYLNRTEAANVEKITTRLLKTGVKPDQIGIITPYEG
QRSYLVQYMQFSGSLHTKLYQQVEIASVDGFQGREKDFIILSCVRANEHQGIGFLNDPRR
LNVALTRAKYGVIIVGNPKVLSKQPLWNNLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK
LVNTINPGGRFMSTAMYDAREAMIPGSAYDRSSAPGRPSNMYFQTHDQIGMIGAGPGHMA
AMNLPIPLNLVMPPMPPPSYMGHANGPTGMKGGMKENSGRGQRSRGGPQGNSPHSQDGAS
QPFSQGPLTQGYMNMSQPSMSQPGLSQVTHTHDSYLGDEFKSQMDVALSQDSTYQGERAY
QHGVTGLSQY
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaggcatacgggccgagctcgcagactctcaccttcctggacacggaagaa
gcggagctgctcggagcggacacgcagggctccgagtttgacttcaccgacttcactttg
ccaagccagacccagactcagggccacacgcagagtcagctggacgcacagtggtactgt
ccggacaacggccttcacaatggcggcgtggaagaccctgtggccaaaaccactcagctg
ctgcaagagctcaactttgaggaggacgaagaggatgcgttctgcaccaaagacctgcct
gtgcacgcctgcagctactgtggcattcatgtcccagactgcatggtttactgcaacacc
agcaagaagtggttctgcaacagccgaggaaacatgtctggcagccacatcgtgaatcac
ctggtgcgtgccaagtgtaaagaggtgacgctgcacaaagacgggccgctgggcgagatg
gtgctggagtgttacaactgcggctgtagaaacgtcttcctgctcggcttcatccccgcc
agggccgactctgtggtggtgctgctctgcagacagccgtgtgcgagccagagcagcctg
aaggacataaactgggacagctctcagtggcagccgctcatccaggatcgctgcttcctg
tcgtggctcgtgaagatcccgtctgagcaggagcagctcagggccaggcagatcacagca
cagcagatcaacaagctggaggagctgtggaaggacaacccgggcgcgtcgctggaggac
ctggagaagcccggcgtggacgaggagcctcagcaggtgctgctcagatatgaagacgct
tatcagtaccagaacgtgttcgggcccctggtcaaacatgaggctgactacgacaagaag
cacaaagagttacagacccaagacagcatcaccatccgctgggacctgggcctgaacaaa
aagcgcaaggcgtactttatcctgcctaaaatggacacaggagacatgaagctgctgccg
ggagacgagatcagcctgagttacaagggcgacttgggtcctccctggaaaggcatcgga
cacgtcatcaaagtccccgacaactacggagacgaaatcgccatcgagctgcgcagcggg
gccaatgctccggtgcctatcacacgcaacttccaggtggactttgtctggaagtccaca
tcgtttgataggatgcagagcgccctgaagacgtttgcggtggatgagacctccgtgtcc
ggatacatctaccacaaattcctgggacacgaggtggaagacgtcaccatcaagtgccag
ctccccaaacgcttcaccgctcagggcctgcccgacctcaacttctcgcaggtttatgct
gtgaagacggtgctgcagaagcctttgagtctgatccagggacccccagggaccggtaaa
acggtcacctctgccaccatcgtgtaccacctgtctcgccagggaaacgggccggtgctg
gtgtgtgctcccagtaacatcgccgtggatcagctcacagagaaaatcgacaaaacaggg
ctgaaggtggttcgtctttgcgccaagagtcgagaggccatcgagtcaccggtgtcgttt
ctggctctgcacaaccagatcagtaacatggacagcatgcctgagctgcagaagctgcag
cagctgaaggatgagaccggagagctgtcgtctgctgacgagaagcgatacagagctctg
aaacgcactgcagagagggagctgctcatgaacgccgacgtgatctgctgcacgtgcgtc
ggagccggagatcctcgtctggctaagatgcagttccgctccatcctgatcgacgagagc
actcaagccacggagccggagtgcatggtgcccgtggtgctgggggccaagcagctgatc
ctggtgggcgatcactgccagctgggcccggtggtcatgtgtaagaaggcggccaaagcc
ggtctgacccggtccctgttcgagcgcctggtggtcctgggcatccggcctatccggctc
caggttcagtaccgcatgcacccggccctcagcgctttcccctccaacatcttctacgag
ggctcgctgcagaacggcgtgacggcagctgatcgcatcaagaagggcttcgacttccag
tggccgcagccggacaagcccatgttcttctacgtgactgcgggtcaggaggagatcgcc
agctcgggaacgtcctacctcaacaggactgaagctgccaacgtggagaagatcaccaca
cgtctgttgaaaaccggagtcaaaccggaccagatcggcatcatcacgccgtacgaaggc
cagcgctcttacttggtgcagtacatgcagttcagcggctccctgcacaccaagctctac
cagcaggtggagattgcgagcgtagatggttttcagggccgagagaaggacttcatcatc
ctgtcgtgtgtgagagcgaacgagcaccaaggcatcggcttcctcaacgacccacgccgc
ctcaacgtcgccctcaccagagccaagtacggcgtgatcatcgtggggaacccgaaggtt
ttgtccaagcagccgctctggaacaatctcctgaactactacaaggagcagaaggttctg
gtggaaggtcctctgaacaacctgagggagagtctgatgcagttcagcaagcctcgaaag
ctggtcaacaccattaaccccggaggacgattcatgagcacagccatgtacgacgctcga
gaagctatgatccctggatccgcctacgaccgctccagcgcacccggtcgtccttcaaac
atgtacttccaaacccacgatcagatcgggatgatcggagcaggtcctggacacatggct
gcgatgaacctgcccatccccctgaacctggtgatgcccccgatgcctccgcccagttac
atgggccacgccaacggaccgacagggatgaaaggaggtatgaaggaaaacagcggccgg
ggtcagaggtcacgagggggccctcagggtaacagcccccacagccaggacggggcctcc
cagcccttctcccaggggcccctcacacagggctacatgaacatgagccagccgtccatg
agccaaccaggcctgtcccaggtaacacacacacacgacagttacctcggggatgagttc
aagtcccagatggacgtggccctgtcgcaggactcgacttaccagggcgagcgcgcatat
caacacggagtgaccggcctgtcccagtactag
DBGET
integrated database retrieval system
