Eucyclogobius newberryi (tidewater goby): 140354319
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Entry
140354319 CDS
T10929
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140354319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eny03021
]
140354319
03036 Chromosome and associated proteins [BR:
eny03036
]
140354319
Transcription machinery [BR:
eny03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140354319
Coactivators
SAGA/TFTC/STAGA complex
140354319
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140354319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
PVL_ORF50
Motif
Other DBs
NCBI-GeneID:
140354319
NCBI-ProteinID:
XP_072295384
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MATNKTVVEASMPGCAESDTARALLKVVPAPSPALKPPSSSAPLLPGSTTSGPIMVLAKM
AAPGGVRSTAPQQQVTNTSGVQLGPSPAPGRTMVITVPRAAASAAAPQTMTVAPRVPQTT
TTQLPANFQIPPGMMLIRSGSGQLMLVSQQAFAQVHQHAPRPSTGPPTPRLLTPPATPPT
VKRNDKVTMIRMTAPPNFQTPPVQKMALVIGVPPKPAMARSPNQPRIYSSAPELKKEAET
LENVKKCKDFLATLIKLASGNSGNMANNVQGLVKNLLEGKLEAEEFTEQLYRELKSTPQP
CLVPFLKKSLPAVRIMTPNPLLFIQTALKTSNPPKSTTGTGKQLMPPPRPGPVASVAPKQ
TGLQSARNYTGTLPMRPFHEQPRQTPKSVSGSYKEDDDINDVASMAGVNLREENAQILTT
QVGAVVQSCQDQPFLAPNALLARVLQMGQPLGVTEVGPEVVALVSHASQEYLRTLLEKMS
VMAQHRKNLVKDDWLHSKVSDVRAQMKFLEDVETLKKKKKDEEERERLLRLARRRSHMED
PVMLQLKQKAKELQQLEQAALLQREANLAALAAIGPRRKRLDGQVSVLPRPDVPRVTRVI
MRDLLQCMEQGRFLRHSLTLYRAMQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaataaaacagtggttgaagcttcaatgccgggctgtgcagaaagcgacact
gctcgtgccctgctcaaagtggtcccagcgcccagtcctgccctgaagcccccctcgtcc
tctgcccccttactgcccggttccaccacctcgggccccatcatggtgctggcaaagatg
gctgcccccggaggagtgaggagcactgccccacaacagcaggtgacaaacacctccgga
gtccagcttggcccctcccctgctccaggccgcacgatggtgataactgtgcccagagct
gctgcttctgctgctgcccctcaaactatgactgtggctcctcgagtgccccaaaccacc
accacacagctcccggccaacttccagatccctccaggtatgatgcttatccgcagtggc
agtgggcagttgatgttggtgtcgcagcaggcgtttgctcaggtccatcagcacgctcca
cggcccagcacgggaccccccacacccaggctcctcactcctccggcaactcctccaaca
gtcaagcggaatgacaaggtgaccatgatccgaatgacagctccacctaacttccagact
cctcctgtacagaagatggccctggtcatcggtgtacctcccaaacccgcaatggcccgg
tccccgaaccagcctcgaatctactcttcggccccagagctaaagaaggaggctgaaacg
ttggaaaatgtgaagaagtgtaaggactttctggcgacgctcatcaaactggcctcgggt
aactcaggaaacatggccaacaacgtccagggcctggtgaaaaatctgctggaagggaag
ttggaagcagaggagttcacagagcagctgtatcgggagctgaagtccaccccacagccc
tgtctcgtgcctttcctgaagaaaagtctccccgctgtaagaatcatgactccaaaccca
ctgcttttcattcaaacagcacttaaaacctccaaccctcccaaatctaccactggcaca
ggaaagcagctgatgccgccgcccaggcccggcccagtggcgtctgttgcccccaagcaa
acgggactacagtctgcacggaactatacaggcacactccctatgagaccatttcatgag
cagcctcgtcaaacacccaaaagtgtctcaggatcctataaagaagatgatgacataaac
gacgtggcttctatggctggagtgaatctccgggaggaaaatgctcagatcctcaccact
caggtcggcgctgtggtgcaatcctgccaagaccagcctttcctcgccccaaacgcactg
ctcgccagagtcctacaaatgggtcagcctttgggggtcacagaggtgggtccagaggtg
gtcgcgctggtctctcacgccagtcaggagtatctgcgcactttgctggaaaaaatgtcc
gtgatggcccaacaccgcaagaaccttgtcaaggacgactggttacactccaaagtgagc
gacgttcgagctcagatgaagtttctggaggacgtggagactttgaagaagaagaagaaa
gatgaagaggagagagaaaggctgctgcggctggcacgacgccgctcacatatggaagac
ccagtgatgctgcagctaaagcaaaaggccaaagagttgcagcaattggagcaggcggcg
ctcctgcagagggaagccaacctcgcggctctggctgcgattgggccccggaggaagagg
ctagatggacaggtttctgttctgccacgtcccgacgttccgagagtgacccgggtcata
atgagggacctgctgcagtgtatggagcagggccgcttcctccgacactccctcactctc
tacagagccatgcagtga
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