KEGG   Eucyclogobius newberryi (tidewater goby): 140355572
Entry
140355572         CDS       T10929                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
eny  Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:eny00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eny04131]
    140355572 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eny04147]
    140355572 (copa)
Membrane trafficking [BR:eny04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    140355572 (copa)
Exosome [BR:eny04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   140355572 (copa)
  Exosomal proteins of bladder cancer cells
   140355572 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 140355572
NCBI-ProteinID: XP_072296312
LinkDB
Position
Unknown
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGLSGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETIPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAITAKGKAGQMAADLDMEAP
GGEGWGEDAELQLDDDGFMDAQEGFGEEGGVAKDEGGGGWEVEEDLDLPPELDLPAAAGG
GADDGFFVPPTKGMSPTQTWCNNSQLPVDHILAGSYETATRLLHDQVGVVNFGPYKSLFM
QTFSRARTCFLGLPSLPCLRSHLQRNWKDCGAKQGLPAVGLRLADLISRLQQCYQLTTAG
RFEEAVDKFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQ
QKRLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQ
TRKILAACEKNLTDAHQLNYDAHNPFDLCAASYVPLYRGRPIEKCPLSGACYCPTYKGQI
CRVTQVTEIGKDVIGLRVSPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgttaaccaagtttgagaccaaatcagcccgtgtcaaagggctcagtttccaccccaaa
aggccatgggtgctggcgagtttgcacaacggggtcatccagctgtgggactaccggatg
tgcacgctcatcgacaagttcgacgagcacgacgggcccgtgagaggaatcgacttccat
aagcagcagcctctctttgtgtccggaggagacgactacaaaattaaggtgtggaactac
aagctgaggcgctgcctcttcactctcctcggccacttggactacatccggaccaccttc
tttcaccatgagtatccttggatcctcagcgcctcagatgaccagaccatccgcatctgg
aactggcagtccaggacctgcgtttgcgtgctgacgggacacaaccactacgtgatgtgc
gcccagttccacccggccgaggacctggtggtgtcggcgtcgctggaccaaaccgtgcgg
gtgtgggatatctctggtttgaggaagaagaacttgtctcccggcgccgtggagaccgag
gtgcgagggctctccggcgtggatctgttcggagcctcggacgccgtggtcaaacacgtg
ctggagggtcacgatcgcggagtgaactgggcggccttccatcccaccatgcccctgatc
gtctctggggccgacgacaggcaggtcaaaatctggaggatgaacgagtccaaggcgtgg
gagctggacacgtgccgcggtcactacaacaacgtctcctgcgccgttttccacccgcgg
caggagctgattctgtccaactccgaggacaagagcatccgcgtctgggacatgtccaaa
aggaccggcgtccagaccttcaggagggaccacgaccggttctgggtcctgggggctcat
cccaacctcaacctgttcgctgcgggtcatgacagtgggatgatcgtgttcaaactggag
cgtgagcgtccggcctacgccgtctacggaaacatgctttactatgtcaaagaccgattc
ctccgacaactcgacttcaacagcagcaaagacaccgccgtcatgcagctgcgcagcggg
tccaagttccccgtgttcagcatgtcctataatcctgccgagaacgccgtgctcctctgc
accagagcgacgaatctggaaaacagcacttacgacttgtactccatccccaaagagagt
gactcgcagaaccccgacgctccggaggggaaaaggtcctcgggtctcaccgcggtgtgg
gtcgccaggaacaggttcgccgtcctggatcgtatgcactcgctgctgatcaagaacctg
aagaacgagatcgtgaagaaggtccaggtcccgtcgtgcgaggagatcttctacgccgga
accggctccctgctgctccgcgacgccgacggggtcacgctgttcgacgtccagcagaag
cgctcgctcgccaccgtcaagatcgccaaagtcaagtacgtggtgtggagcgccgacacc
agccatgtggccctgctcgccaagcacgcgatcatgatctgcaaccggaagctggagagc
ctgtgcaacatccacgagaacatccgggtgaagagcggcgcctgggacgagagcggcgtt
ttcatctacaccacctccaaccacatcaaatacgccctcacctccggcgaccacggcatc
atccggaccctggacctgcccatctacgtgacccgcgtccggggcaacagcgtctactgt
ttggaccgcgagtgtcgcccgcgggtcctcaccatcgaccccaccgagtaccgcttcaaa
ctggccctggtcaaccgcaagtacgacgaggtgctccacatggtgcgcaacgccaagctg
gtaggccagtcgatcatcgcgtacctgcagaagaagggctaccccgaggtggcgctgcac
ttcgtcaaagatgagaagactcgcttcagtctggcgctggagtgcggaaacatcgaggtg
gcgctggaggcggcgaaagccctggacgagcgctcgtgctgggagcgtctgggtgaagcg
gccctgctccaggggcatcaccaggtcgtggagatgtgctaccaacggaccaagaacttt
gacaagctcacctttctctacctcatcaccgggaacctggccaagctgaggaagatgatg
aagattgccgagatcaggaaggacatgagcggacactaccaggcggctctgtatctggga
gacgtgagcgagagagtgcgcatcctcaagaactgtggacagaagtccttggcgtatctg
accgccgccactcacggactggacgaagaggccgaggcgctgaaggagacgttcgaccca
gagaaggagacgatcccggaggttgatccgaacgctcagctcctgcagccgccgcctccc
atcaaccctctggacactaactggcctctgctcaccgtgtccaagggcttcttcgagggc
gccatcactgccaagggtaaagctggtcagatggcggctgatctggacatggaggctccc
ggaggagaaggctggggagaggacgcagagctgcagctggacgacgatggtttcatggac
gcgcaggagggattcggagaagagggaggtgtggcgaaggacgaaggcggaggaggatgg
gaggtggaggaggacctggaccttcctccggagctggacctcccggcggccgcaggagga
ggagccgacgacgggttctttgtgccgccgaccaaaggcatgagtccgacccagacgtgg
tgcaacaactcacagctgcccgtcgaccacatcctggccgggtcctacgagaccgccacc
aggctgctgcacgatcaggtgggcgtggtgaactttggcccctacaagagcctcttcatg
cagaccttctccagagcgcgcacctgtttcctggggctcccgtcgctgccctgtctgcgc
agccacctccagaggaactggaaggactgtggggcgaagcagggcctcccggctgtgggc
ctgcgcctggccgacctgatctcccgcctgcagcagtgctaccagctcaccaccgcgggg
cgcttcgaggaggccgtggacaagttcagagccatcctcctgtcggtgcctctgctcgtg
gtcgacaacaagcaggagatcgcggaggcgcagcagctgatcaccatctgcagggaatac
atcgtgggactcaccatggaaacggagaggaagaagctgcctaaagacacgctggaccaa
cagaaacgactttgtgagatggcggcgtacttcactcactgtaacctgcagccggttcac
atggttctggttctgaggacggcgctcaatcttttcttcaaactccggaacttcaaaact
gccgcaggattcgcccggcgccttctggagctcgggcccaaaccggacgtggcacagcag
acccgtaagatcctggcggcgtgcgagaagaacctgacggacgcgcaccagctcaactac
gacgcccacaaccccttcgacctctgcgccgcctcgtacgtgcccctgtaccgcgggcgc
cccatcgagaagtgtccgctgtccggggcctgctactgccccacctacaagggccagatc
tgcagggtcactcaggtgaccgagatcggcaaagacgtgatcggcctgcgcgtcagtccg
ctccagttccgctga

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