KEGG   Eucyclogobius newberryi (tidewater goby): 140355934
Entry
140355934         CDS       T10929                                 
Symbol
lig1
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
eny  Eucyclogobius newberryi (tidewater goby)
Pathway
eny03030  DNA replication
eny03410  Base excision repair
eny03420  Nucleotide excision repair
eny03430  Mismatch repair
Brite
Enzymes [BR:eny01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     140355934 (lig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     140355934 (lig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     140355934 (lig1)
DNA replication proteins [BR:eny03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    140355934 (lig1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     140355934 (lig1)
DNA repair and recombination proteins [BR:eny03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     140355934 (lig1)
   NER (nucleotide excision repair)
    Other NER factors
     140355934 (lig1)
   MMR (mismatch excision repair)
    Other MMR factors
     140355934 (lig1)
SSDB
Other DBs
NCBI-GeneID: 140355934
NCBI-ProteinID: XP_072296692
LinkDB
Position
Unknown
AA seq 1117 aa
MQRSIASFFQPKTKKKSADEPVKKPTKSPLKVQNGAHEVDSPVKKPPKRSRQILDSDEDE
DEAPENQEDAVKEKKKDESEKKSSEKSSEKSSEKSSEKSSEKSNEKSNEKSKKDKSEKKR
SSEMDTSSEEEAKKEDTNEKKEKSSEKSEKKSSEKKSSEKKSSEKKSSEKKSSEEEKSKK
KSSEKDTSSEEESKKKKDTSSEKKSCKKDESSEEKMDTSSEMDKPVKDESSKAAPTPKSP
PPPPPTTPITPRTPATPATPAPSASSGTPCTPNSISPPGIVKRKTARKMFPKRKLEQSES
RDKDGPEAKDDAAGHQNKRARVESGAGAAESADEPMEEEAEPEKPAPAEPASEKSTKATE
RDVREEEPGSAEKKIDGDEKETTVAGKAPEKPKPRVKESPKSQAEKAREDKPPAKKPAIS
SFFAPRKAATTTVKTENAEPSEGEKKTQRKSLGEDRKSEVTPGQTDYDPSRPHYHPVDHA
CWKHGQKVPYLAVARTFERIEEDSGRLKNIETLSNFLRSVLLLSPDDLLCCLYLCLNQLG
PAYLGMELGVGETVLMKAVAQATGRQLDKIKAESQERGDLGLVAESSRSNQRTMFQPASL
TAAAVFKKLKEIAAMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAELSV
LSALSQAVCLTPPGQDFPPAVIDAGKGMSSDNRRAWIEEKTLILKQTYCEMPNYDVLIPV
LLKEGVDELPKRCKLTPGVPLRPMLAHPTKGVGEVMKKFDEATFTCEYKYDGERAQIHIL
ENGDVRIFSRNQEDNTTKYPDIISRIPKVMKESVVSCVLDSEAVAWDREKRQIQPFQVLT
TRKRKDVDASEIKVQVCVYAFDLLYLNGESLVKQPLSRRRALLHESFTEVEGEFVFAKSI
DSDSTDAIAEFLEQSVKDSCEGLMVKTLEKDATYEIAKRSHNWLKLKKDYLDGVGDTMDL
CVIGAYLGKGKRTGTYGGFLLACYDEENEEFQSVCKIGTGFKDEDLEQHYKFLKEHILPK
PRAYFRVDASAEPDVWLDAVQVWEVKCADLSLSPVYKAGLGLVDPEKGISLRFPRFLRIR
EDKKPEDATSGSQIAVLYKKQQQIQNQGDKADPEDYY
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgcagcggagtatcgcatccttttttcagcccaaaactaaaaagaagtcggcagatgaa
ccggtgaagaagccgacgaagagtccgctgaaggtgcagaacggggctcacgaggtggac
tcccccgtcaagaaacctcccaaacgtagccgccagatcctggacagcgacgaggacgag
gacgaggcgccggagaatcaggaagatgccgtgaaggagaagaagaaggacgagagcgag
aagaagagcagcgagaagagcagcgagaagagcagcgagaagagcagcgagaagagcagc
gagaagagcaacgagaagagcaacgagaagagcaagaaggacaagagcgagaagaagagg
agcagcgagatggacacaagcagtgaggaggaggccaagaaggaggatacgaacgagaag
aaggagaagagcagcgagaagagcgagaagaagagcagcgagaagaagagcagcgagaag
aagagcagcgagaagaagagcagcgagaagaagagcagtgaggaggagaagagcaagaag
aagagcagcgagaaggacactagcagtgaggaggagtcgaagaagaagaaggacacgagc
agtgagaagaaaagctgcaagaaggacgagagcagtgaggagaagatggacacgagcagt
gagatggacaagcctgtgaaggatgaatcgtccaaagcggctcccaccccaaagtctcct
cctcctcctcctccgactacccccatcaccccgaggacccctgccacccctgccaccccg
gccccgtctgcctcctctgggacgccgtgcaccccaaactccatatctcctcccgggatc
gtcaaacgcaaaaccgcgaggaagatgttccccaagaggaagctggagcagagcgagagt
cgagacaaagacgggccggaggcgaaggacgacgcggcgggtcatcaaaacaaacgcgcc
cgggtggagagcggagccggcgcggcagaaagcgccgacgaaccgatggaagaggaggcg
gagccagaaaaacctgcccccgccgaacccgcgagcgagaagtccacaaaggccacggag
cgggacgtccgagaggaagagcctggaagtgcagaaaagaagatcgacggcgacgagaag
gaaacgaccgtcgcgggaaaagcgcctgaaaagccaaagccgagagtcaaagaaagcccc
aaaagtcaagccgagaaagcccgggaagataagccgcccgccaagaagcctgccatcagc
agtttcttcgcgccgagaaaagcggcaacgacgacggtgaaaacggagaacgccgagcca
agtgaaggagagaagaagacgcagaggaagagtttgggggaggatcgcaaaagcgaggta
acgccgggacagacggattacgacccctcgagaccccactaccaccccgtcgaccacgcc
tgctggaaacacggacagaaagtgccgtacctggctgtggctcgcaccttcgagaggatt
gaagaggactcgggcaggctcaagaacatcgagacgctgtccaacttcctccgctcggtg
ctgctgctctctccagacgacctgctgtgctgcttgtacctgtgtctgaaccagctgggc
cccgcctacttgggcatggagctgggcgtgggagaaacggtgctgatgaaggctgtggct
caggcgacgggtcgacagttggacaagatcaaggcggagtcgcaggagagaggcgacctg
ggcctcgtggccgagagctcgcgcagtaaccagcggacaatgttccagccggcgagtctc
accgccgccgccgtcttcaagaaactcaaggagatcgcggccatgagcgggaattctgcc
atgaataagaaaatcgacatcatcaaagggctcttcgtggcgtgccgtttctccgaagcg
cgctacatcgtcaggtcgctggccgggaagctgaggattggcctggccgagctcagcgtt
ctgtcggcgctgagccaagcggtgtgtctgactccgcccggacaagatttccctcccgct
gtgatcgacgcagggaaaggaatgagctccgacaaccgccgcgcctggatcgaggagaag
acgctcatcctcaaacagacctattgcgaaatgcccaattacgacgtgctcatcccggtt
ctgctaaaggagggcgtcgatgaactccccaaacgctgcaaactcactccaggcgtcccc
ctcaggcccatgttggctcacccgaccaaaggcgtgggcgaggtcatgaagaagtttgac
gaggcgacgttcacctgcgagtacaagtacgacggagagagggctcagattcacatcctg
gagaacggcgacgtgcgcattttcagccgcaaccaagaagacaacaccaccaagtatccg
gacatcatctcccgcatccccaaggtgatgaaggagtcggtggtgtcgtgcgtgctggat
tctgaagccgtggcctgggaccgagagaagaggcagatccagccgttccaggtcctcacc
acgcgcaagagaaaggacgtggacgcctctgaaatcaaagtgcaagtttgtgtctacgcc
ttcgacctgctgtatctgaacggagagtcgctggtgaagcagccgctgtctcgtcggagg
gctctgctccacgaaagtttcaccgaagtggagggcgagttcgtcttcgccaaatccatc
gactcggacagcacggacgccatcgccgagttcctggagcagtccgtgaaagattcctgc
gagggtctgatggtgaagactctggagaaagacgccacttacgagatcgccaaacgctct
cacaactggctcaagctgaagaaggattacctggacggcgtgggcgacacgatggacctc
tgcgtgatcggagcgtacctggggaaagggaagcgcaccgggacgtacggaggcttccta
ttggcttgctacgacgaggagaacgaggagtttcagtccgtctgcaagatcgggaccggg
ttcaaagacgaagacctggagcagcactacaagtttctgaaggagcacatcctgcccaag
ccccgggcgtacttccgcgtggacgcctcggccgagcccgacgtgtggctggacgccgtg
caggtttgggaggtgaagtgcgccgacctctcgctgtcgcccgtctacaaggccggactc
ggactggtggatccagagaagggaatctcattaagatttcctcgtttccttcgaatccga
gaggacaagaagccggaggacgccaccagcggctctcagattgcagttttgtacaagaag
cagcagcagatccagaatcagggcgacaaggcggaccccgaggattactactga

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