Eucyclogobius newberryi (tidewater goby): 140356037
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Entry
140356037 CDS
T10929
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140356037 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140356037 (ndc1)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140356037 (ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
140356037
NCBI-ProteinID:
XP_072296828
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MISVQQSCWFVRKVIWWRAAASIAWAVLLLPLTTGVFVFLSRFSFFHPVQWIYECVSLML
DISSIFSLILLSGVVIVIGFLNLKYYSVIPTIACSKIALLGQLLHPRQFFNSLVHCIMGM
IMAWCCAITIGGRYETLCSPCQQSDAESPACMCLNEYHLFLLLCGAFVGFSHSLLGVIHN
MNYVAFHAVQQYKYLRFKASIPLVLKCSAAQALYSVCHFFVVYFFLGHAPRAWLCKTLNL
DVDGSVHALDTVGGLLDLSLLYHTWTSASFLLFTWYTTLLLFRVFVTELYSFPVQTSFTD
DVQQCLPKVIAEKHPMILKFLALQDLALLSQHSPMRRAEVFSLSQPGGHPHNWNAISKEC
LSLLSDLTQRLVAYHDTVATNGRSKTLSSGSGRKTSSEASVSPGDPFSPRPAIPMKTPTS
VFARSIAGGPRGPRSPLTAPFTPDLDSPFSSPALRCITAPAEQFSPWHGTVQSPHIFRRG
PKLWSTSTDSKSSSPPPSPAPAPSPKQEASKPGFLAQFLQNRREQVKHFLAKRVLIMYWF
NKLPEASSQALFSDGQAHIWALEGLSYLVQASYSEDQFGVVQTTLPSILGSMLALQEAVD
RHFKLPHASSKPSRSGSVMGDCNYKTLRFALRATLKTALYRITSTFREHLNAVQMSAEHR
KKLQHFLEYKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagtccagcagagttgttggtttgtccgtaaggtgatttggtggagagctgca
gccagtattgcttgggccgtcctcttgttgcctctgaccacaggcgtttttgtttttctc
agtcgtttcagctttttccacccggttcaatggatctacgaatgcgtgtccctcatgttg
gatatcagttccattttctccttgatccttctgagtggcgtcgttattgtgatcggtttt
ctcaacttgaagtattactcggtcataccaacaattgcctgctcaaaaatcgccctcctc
ggacagctcctccacccccgtcagtttttcaattctctggtgcattgcatcatggggatg
atcatggcctggtgttgcgccatcacgatcgggggccgatacgagaccctttgttcccct
tgtcaacagagcgacgcagagagtcccgcttgcatgtgtctgaacgagtatcatcttttc
cttctgctctgcggggcgttcgtagggttttctcacagcctcctgggcgtcatccacaac
atgaactacgtcgccttccacgcggttcagcaatacaaatacctgcgcttcaaggcctcc
attccactggtgctgaagtgcagcgccgctcaagcactttattctgtctgccacttcttt
gtggtttacttctttctgggacacgcccccagagcctggctgtgtaagacccttaacctg
gacgtggacggctccgtgcacgccctggacaccgtggggggcctgctggatctctcctta
ctctaccacacgtggaccagcgcctccttcctcctcttcacctggtacaccactctgctg
ctcttcagggtctttgtcacggagttgtacagttttccggtccagacatcgttcactgac
gatgttcagcaatgtctgcccaaagtcatcgcagagaagcatcccatgattctcaagttt
ttagcgctgcaagacttggcccttctttctcagcactcgccaatgcgccgcgccgaggtc
ttcagtctgagtcagccaggcggccaccctcataactggaacgccatcagtaaagagtgt
ctgtcgcttctgtctgatctgacccagagactcgtggcctatcacgacaccgtggcaaca
aacggccgctccaaaactctgtccagcgggagcggcaggaagacctcgtccgaggcctca
gtgagccccggggacccgttcagccctcgccccgccatcccgatgaagaccccgacctcc
gtgttcgcgcgctccatcgccggcggcccccgcggcccccgcagccccctgaccgcgccc
ttcaccccggacctggacagcccgttctcctcgcccgccctgcgctgcatcaccgcgccg
gccgagcagttctcgccctggcacgggacggttcagagcccgcacatcttcaggcgcggg
cccaaactctggtccacgtccaccgactctaaaagcagcagccctcctccgtctcctgcc
ccggcgccctctcccaaacaggaagcctccaaacccggcttcttggcccagttcctccaa
aacagacgagagcaggtgaaacatttcttggcaaagcgagtgctgattatgtattggttt
aacaagctgccagaagcctccagccaggccctgttctccgacggccaggctcacatctgg
gctctggaaggtttgtcgtacctcgtccaggcctcgtacagcgaggatcagtttggagtc
gtgcaaactacattacccagcattctcggctcaatgttggcgctacaagaggccgtggac
agacacttcaagctgcctcacgcctccagtaaaccctctcgctccggcagcgtcatggga
gactgcaactacaagacactgcgctttgctctgagggccacgctcaagactgccctctac
aggatcaccagcacgttcagagaacacctcaacgctgtccagatgtcggccgagcaccgg
aaaaaactacaacattttctggaatataaagagtaa
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