KEGG   Eucyclogobius newberryi (tidewater goby): 140356163
Entry
140356163         CDS       T10929                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
eny  Eucyclogobius newberryi (tidewater goby)
Pathway
eny04115  p53 signaling pathway
eny04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:eny00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140356163 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    140356163 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eny04121]
    140356163 (cop1)
Enzymes [BR:eny01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140356163 (cop1)
Ubiquitin system [BR:eny04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140356163 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     140356163 (cop1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd EIF3I zf-C3HC4_2 Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_DCAF4 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 WD40_like Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st zf-rbx1 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st zf-RING_10 Beta-prop_SPT8 UvrD-helicase zf_C2H2_10 Sina_RING
Other DBs
NCBI-GeneID: 140356163
NCBI-ProteinID: XP_072297050
LinkDB
Position
Unknown
AA seq 720 aa
MSSSRPQLNIVGGASSVPGTSGSGGGGTGSSNSGGGSSGAVTSNGNSSTNVVPSSRSPAS
AAAGSDSVLSVPSLSVAVPSPSSRAGFASLNRPSASTSSRKRSLHQAPLYNGLLNSYEDK
SNDFVCPVCFEMIEEAHMTKCGHSFCFKCIRRSLEDSNRCPKCNYIVDNVDQLYPNFLVN
ELILKQKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLES
ESQAAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMSEADGTVP
NVEAPSPAPSCSSIIDPPDYNQPPGFGGSSQGKRQTWYNSTLASRRKRLTAHFEDLEQCY
FSNKMSRITDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR
DCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDY
EGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVAS
IEAKANVCCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGD
EIVSASTDSQLKLWNVNKTHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGL
SKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgtcaagcagccgaccgcagctaaacattgtcggaggagcgagttcggtgcccgggacc
agcggcagtggaggcggcggcactggaagctccaattccggcggaggaagcagcggcgca
gttacgagtaatgggaacagttctacaaatgtggtgccatcttctcggagcccggcatca
gcagccgctggcagtgacagcgtcttgtcggtgccaagtttgtccgtagcagtgccgtct
ccgtcatccagggccgggtttgcctccctgaacagaccctcagcctccaccagcagcaga
aagaggtccctccaccaagccccactttacaatggactgttgaactcttatgaggataaa
agcaacgattttgtctgccccgtttgttttgagatgattgaagaagcacacatgacaaag
tgtgggcacagtttttgtttcaaatgcatacgacgaagtttggaggacagcaacaggtgt
ccgaagtgtaactatattgttgataatgtggatcagttgtacccaaactttcttgtaaat
gagctgattctcaaacagaagcaaagatcagaggagaaaagattgaaactagatcatcct
aatggatcacggtggcaggtcttccaggacgttctgagcccagaccaggagaaccttgac
ctagcaaatgtgaatctgatgctcgagctcctggttcagaaaaaaaagcaacttgagtcg
gaatctcaagcagcgcaaagacaaatcctaatggagtttctcaaagaggcgaggagaaac
aagagagagcaactagagcaattgcagaaagagctcaactttcttgaagaagacatcaaa
cgtgttgaggagatgagtgggctgtattctccgatgagtgaggcagatggcacagtgcct
aatgtggaggctccctctccagctcccagttgtagtagtattattgatccaccagactat
aatcagccgccgggttttggtggttcatcacagggcaaaagacagacttggtacaacagc
acactagcatcgagaagaaagagactgacggcacattttgaggacttggagcagtgttac
ttctccaacaaaatgtccagaatcacagatgaaggcaggaatctgaatcagctggatgac
tttatggagtgtctatccaagttcacccgctacaactcagtgcgccccctcgccaccctt
tcatacgccagtgacctctataatggctctagtatagtgtccagtattgagtttgaccgt
gactgtgactactttgccattgccggtgtgaccaagaaaataaaggtctttgaatacggc
actgtgatccaagatgcagtagatattcactatccagtcaatgaaatgacctgcaattct
aaaatcagctgtatcagctggagcagttatcacaagaaccttctggccagcagtgactat
gaggggactgtcatcctgtgggatggatttaccggtcagaggtccaaagtctatcaggag
catgaaaagaggtgttggagtgttgacttcaatctgatggaccccaagctcttagcctca
ggttcagatgatgctaaagtaaaattatggtcaacaaatcttgacaattctgtggccagt
attgaagccaaggcaaatgtctgctgtgttaaattcagtccaacgtccagatatcacctg
gcctttggctgtgcagaccactgtgttcactactatgacctacgtaacactaagcagcca
atcatggttttcaaaggccacagaaaagctgtgtcttatgccaagtttgtgaatggagat
gaaatagtctcagcatctacagacagtcagctaaagttgtggaacgtcaacaaaacccat
tgtctgcgttcatttaaggggcacatcaacgagaagaactttgtcggtctggcttccaat
ggagactatgtggcttgtggcagcgaaaacaactcgctgtacttgtactacaaaggactt
tcaaaaacactgctaacgttcaagtttgacaccgtgaaaagtgttttggacaaagataag
aaagaagatgacaccaacgagtttgtcagtgcagtttgttggagggccttgccagacgga
gagtcaaatgtgttaatcgctgcaaacagtcagggaacaatcaaggtacttgagctcgtg
tga

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