Eucyclogobius newberryi (tidewater goby): 140358245
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Entry
140358245 CDS
T10929
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03040
Spliceosome
Brite
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140358245 (ddx42)
Spliceosome [BR:
eny03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140358245 (ddx42)
Complex B
140358245 (ddx42)
Complex C
U2 SnRNP specific factors
140358245 (ddx42)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
140358245
NCBI-ProteinID:
XP_072299064
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Position
Unknown
AA seq
921 aa
AA seq
DB search
MTYATAIIAENTETALAARKSTMNWNKGGQGGKRGFGFGGFVLGGKKDEPPVPPKTHTTF
GGSGSSGAYGKNQQMPSFYKIGTKRANFDEENAYFEDDEEDASNNVDLPYIPAENSPTRQ
QMKSGRGSDSEDDPLDAFMAEVESQAARDMKILEEKEKENPDKGIRDDIEEEDEQEAYFR
YMAENPTAGLTLEEEEENIDYDSDGNPIPSTTKKIILPLPPIDHSEIDYPPFEKNFYQEH
EELSSLTGTQVVELRQKLNLRVSGAAPPKTGTSFAHFSFDEQLMHQIRKSEYTKPTPIQC
QGVPIALSGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKELETGDGPIAVIVCPTRELCQQ
IHAECKRFGKAYSLRSVAVYGGGSMWEQSKALQEGAEIVVCTPGRLIDHVKKKATSLQRV
TYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIERLARDILLDPIRVVQ
GDIGEANEDVTQVVEMLPTPSDKWNWLTRRLVEFTSSGSVLIFVTKKANSDELATNLTQE
GYSLGLLHGDMDQSERNKVISDFKKRNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDT
HTHRIGRTGRAGEKGVAYTLLTNKDTSFAGDLVRNLEGANQAVSRELMDLAMQNSWFRKS
RFKGGKGKKLNIGGGGLGYKERPGLGADSSVSFSSSIMSSSSYESYSKPTTGAMGDRIAA
MKQAFNAQYKSHFVAATGNAPKLSSRSSSTSGWTSAGSLSSIPTEAASSPKMSGFTSAGT
LSSVPSIQPSVQPSPQPLYPPALPPPKDSSRDSSRDRHGDDRGRHGDDRGRHSDSHHRHS
DRGHSDDRHGGRDRHGDRDRHSSSSSSSSSSRHSDSRHSDSRNGDGSRRDREERRSDRDE
DRDDGFAVPDPPKKRKSRWDL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatgcgaccgccatcatcgcagaaaatacagaaactgctctcgccgcgagaaaa
agcacaatgaactggaacaagggcggccaaggtggcaagcgagggtttgggtttggagga
tttgtccttggagggaaaaaagatgaacctcctgttccaccaaagactcacaccacattt
ggaggctcgggatctagtggagcatatggcaagaatcagcagatgccatcgttctacaaa
ataggaactaaacgagccaactttgatgaagaaaatgcgtattttgaagatgatgaagag
gatgccagcaacaatgtggatctgccgtatatcccagcagagaactcgcccacacggcag
cagatgaagtctggcaggggttctgacagcgaagatgaccctttggatgcctttatggca
gaagttgagagccaagctgcaagagatatgaagatattggaggaaaaagagaaagagaat
cctgacaagggtattcgcgatgacattgaagaggaggatgaacaagaagcttatttccgt
tacatggcagagaatccaaccgcagggctgaccctggaggaagaggaggaaaacattgac
tatgacagtgatggaaacccaattccttcaaccacaaagaaaatcatcttgccccttcca
ccgattgaccattcggagatcgattatcctccctttgagaaaaacttttatcaagaacac
gaggagcttagtagcctgactggaacacaggttgtagagctcaggcaaaaactgaatttg
agggtttctggggcagctcctccaaagacaggtactagctttgcccattttagctttgac
gaacagctgatgcaccaaatccgcaaatctgaatacacaaaaccaacaccaattcagtgc
cagggtgtacccattgctttatctggccgcgacatgattggtattgcaaaaactggtagt
ggaaaaacggcagcttttatttggccaatgttggttcatattatggaccagaaggagcta
gagacaggagatggtcccattgcagtcatcgtctgcccaacaagagagctttgtcagcag
attcatgccgagtgtaagcgttttgggaaagcctactcgttgcgatcagtggcggtttat
ggaggaggaagcatgtgggagcagtccaaggcgcttcaggaaggggcagaaatagttgta
tgcactccgggtcgtttgattgatcatgttaagaagaaggccacatctcttcagagagtc
acatatctggtgtttgacgaggccgatcgcatgtttgatatgggctttgaataccaagtt
agatctattgccagccatgtgcgcccagacagacaaacccttctgttcagtgcaactttt
cgaaagaagatagagagactggccagagacatcctgctagatcctattcgtgttgtgcaa
ggagacattggagaggctaatgaggatgttactcaagtggtggagatgctgcccactccc
tctgataagtggaactggctgacacggaggctggttgagttcacgtcctcgggctcagtc
ctcattttcgtcacaaagaaggcaaactctgacgaactggccacaaacctgacccaggag
ggctacagcctgggcctgcttcacggagacatggaccagagtgagaggaacaaggtcata
tctgactttaagaagaggaatctgcctgttctggtagccactgatgtagcagcccgtggt
cttgatatcccatctattcggacggtggtgaactacgacgtggcgcgcgacatcgacaca
cacacgcacagaatcggtcgaacggggcgtgcaggagagaagggcgtggcttacactctc
ctcaccaacaaagacacgtcatttgccggtgacctcgtacgaaatctggagggagcaaat
caggctgtctcgagggagctgatggatttagccatgcagaattcttggttcagaaagtcc
agattcaagggtgggaaagggaagaagttgaacattggtggaggcggtctgggttacaaa
gaaagaccgggcctcggagctgacagctcagtaagtttcagcagcagtatcatgtcttca
agtagttatgaaagctacagcaaaccaactacaggagctatgggagatcgaattgctgca
atgaaacaagctttcaatgctcagtacaagagtcactttgttgctgccaccggtaatgcc
ccaaagctcagctcaaggtccagcagcacctccggctggaccagcgccggcagcctcagc
tctattcccacagaagccgccagcagcccaaagatgtccggcttcaccagcgctggaacc
ctcagctccgtccccagcattcagcctagcgtccagccgagcccccagcctctttacccg
ccggcgctgcctccgcccaaggacagctcccgggacagttcccgagacagacacggggac
gaccgcgggcgccatggagacgaccggggccggcacagcgacagtcaccaccgccacagt
gacagaggccacagtgacgatcgccacggaggcagggatcgccacggagaccgggaccgc
catagcagcagcagtagcagcagtagtagtagccgtcatagcgacagtcggcatagtgac
agtcgtaatggagacgggagcaggagggacagggaggagaggagaagtgacagagatgaa
gacagggatgatgggtttgccgttcctgatccgcccaaaaaaagaaagagcaggtgggac
ctctaa
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