Eucyclogobius newberryi (tidewater goby): 140358304
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Entry
140358304 CDS
T10929
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04120
Ubiquitin mediated proteolysis
eny04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140358304 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
140358304 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eny04121
]
140358304 (mgrn1b)
Enzymes [BR:
eny01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140358304 (mgrn1b)
Ubiquitin system [BR:
eny04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140358304 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
140358304
NCBI-ProteinID:
XP_072299159
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPSMVSETVHYKRGVSQQFSMPSFKIDF
TEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFTSGVGGERGQLSSPEHLSDSSLQKSKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAHPHTLLSSSPAPTENTATDDVAESLSPDDEDR
LAVEGDILQDCNSEHSSLNKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCSTSNY
RLEDERLSP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatattaagccgtagaatcgctggtgttgaggatatcgacatccaggccaac
tcggcttatcgattcccacctaaatctgggaattattttgcaagccatttcttcatggga
ggggaaaaatttgacacaccccatccagaagggtatctttttggtgaaaacatggacctt
aactttcttggcaatcggccagtgcagtttccatatgttacacctgcgccccatgagcct
gtgaaaaccctacggagtttggtaaacattagaaaggactccttacgcttggtcaggtat
aaagatgactctgatacaccggtggaggaaggagggaagcccaaagttcagtacggagta
gagttcacctttgatgccgacgctcgtgttgccatcactctgtattgccaagcatttgag
gaattctccaatgggatggcagtgtacagtcccaaggacccatccatggtttctgaaaca
gtgcactataaaagaggtgtgagccaacagttttcaatgccatcatttaaaatagacttc
accgagtggaaagaggaagatctgaactttgacttggaccgtggagtgtttcccatggtg
atccaagctgtggtcgacgaaggagatgattgtttggggcatgcccatgtgcttctggcg
gcttttgaacgacacgttgacggcagcttctctgtcaagcccctgaaacagaagcaaatt
gtggaccgtgtaagctaccttttacaagagatttatgggattgagaataaaaacaaccag
gaaaccaagccttcagatgatgaaaacagtgacaacagtaatgagtgtgtggtctgtctg
tccgacctaagagacactctgatcttgccctgtcgacacctgtgtctttgtaactcgtgc
gctgacacccttcgctatcaggccaacaactgccccatctgcaggctgcctttcagagcg
ctgttgcagatcagagctgtgaggaaaaaacctggtgctctgtcccctgtgtccttcagc
cctgttctggcccaaactatggatcatgatgaacactcaagctcggactccgttcctcct
ggatttgagccaatttctttgctggaggctctgaatggcctgaggtccgtgtcccccgct
atcccgtccgctcctctttatgacgagatcaatttcaccagcggagtaggaggagagagg
gggcagttaagctctccagagcatttgagcgacagcagcctgcaaaagagcaaagtcagc
aagtctcccgacagcaccctgagatctccctcctcgcccatccaggaggaggatgaggag
aagctgtcggagatgtctgatgcccatccgcatactcttctatccagcagccctgctccc
accgagaatactgctacagatgatgtggcggagtctttgtctccagatgacgaggacagg
ctggccgtggaaggagacatcctgcaggactgtaatagtgagcacagcagcttgaacaaa
accgagagcgaccctcctggagacctctctcttcccgggtcatctgagtccactgaaagc
ctgaaaagtcagagcactaactgctccagccagcctctcctgtgttccacgagcaactat
cgtttggaggacgagcgcctcagcccctga
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