Eucyclogobius newberryi (tidewater goby): 140359430
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Entry
140359430 CDS
T10929
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04622
RIG-I-like receptor signaling pathway
eny05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
140359430 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140359430 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
eny04054
]
140359430 (ifih1)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140359430 (ifih1)
Pattern recognition receptors [BR:
eny04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
140359430 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
CARD_2
ResIII
DEAD
Helicase_C
SWI2_SNF2
CARD
SNF2-rel_dom
DUF3638
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
140359430
NCBI-ProteinID:
XP_072300457
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MAESVDSASDAVRKGLIEIFRPQLKKLIKADQVVDYIHYLSPEQKGQIQQKEGAVAADQL
ITEVLKGPHEPGWFQGFVDALVQAECEPAAKYVKGEMPSPKEEAENEMCAELLRILYPDL
LEKMDVPVLSRDCVAAELITEADKEIIEAEQEPRRQRRKLLERIVQSDGWYSNFLDVLRK
EQHKSLYKVLTGQSAEEDDTEKTPSHKDDLTGNECPAPGPAKDLKGEDCPATAAAPSDES
TDLYSAENAESAQPESSAEPSKVGDEDDSQAAADDSQKEKIVLRDYQMEVARPALEGKNI
IICLPTGTGKTRVAVYITKMHLDKRKKEGLPAKVIVLVNKVPLVEQLYSEEFSKFLKPTY
KVERVSGNSELKITFTEIVKMYDVVVCTAQILENSLERSVSGEDEGVNLSDVSLIVIDEC
HHTQKGGVYNHIMMRFLTQKHKNKKLEKEQKETTPLPQILGLTASPGVGGATKMSKTEEH
ILRICANLDASTIMTANLGKYSKESLKKVEGIEARKADPFGDVIKKIMNDIHTHAELNPG
HECGSQTYEQWVVQTEREAVKEAKEKLRDCAEHLKQYNTGLQLSNTIRMCDAFSFLNSFY
EDEKKKKTSPDGELIDTTDTERFLFNLFDGNKDKLKELAKQPEYENASLSKLRHTILREF
STKDKARGIIFTKTRRSAIALAQWVRDNAKFGDLIVNAAFLIGGGDQSDVKPMTSAEQKD
VLKKFLHGEINLLIATTVAEEGLDIPACNFVIRYGLVTNEIAMIQARGRGRADNSTYTLV
EIEGSNVAEKETVNEFRINMMNKAISKIRVLKQNDYDKRILEFQIQAIMEEKLRVKKSKQ
KKIRDSSPSKLKLVCRKCNIDACTGDGIKIIENMHRVNLSPEFSKLFMVKENNTLRERNL
DYETNGSIACKKCGNPWGSMMFYRGIDCPCLHVKNFAVTLNGKKISKCAKWSELPVKFLD
FDYVSYASQMDSNSDEEEEEEEEEIED
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagtgtggattctgcatcggacgcggtgcggaaaggtctcattgaaattttc
aggccgcagcttaaaaaactcatcaaagcagaccaagttgtcgattatattcactatcta
tccccggagcaaaaaggtcagattcaacagaaagagggagcggtggctgcggatcagctg
atcactgaggttctgaaggggccacatgagccgggctggttccaggggtttgtggatgca
ctggtgcaagcagaatgtgaacctgcagcaaaatacgtgaagggtgaaatgcccagcccc
aaggaagaggcagagaatgaaatgtgcgccgagctgcttaggatcctttaccccgacctg
ttggagaagatggatgtccctgtcctaagcagggactgcgttgctgctgagcttatcact
gaagcagataaggagatcatagaggcagagcaagaacctagaagacaaagacgtaaactt
ctggagcgaatcgtccagagtgatggatggtactctaatttcctggacgttctacgtaaa
gaacaacacaagagcctgtacaaggtgctcacaggacaatctgcagaagaagacgacaca
gagaagacgccctcacacaaagatgatctcacaggaaatgaatgtccagctccagggcca
gccaaagatctaaagggtgaggactgtcctgcgaccgccgccgccccctcggacgaatct
acagatttgtacagtgctgaaaacgctgaatcagcacaacctgagagcagcgctgagccg
tccaaagtaggagatgaggatgactcacaggcagcggctgatgactcgcagaaggagaag
attgtccttcgagattatcagatggaagtggcccgacctgccctggaggggaaaaacatc
atcatatgtctccctacaggcaccggcaaaaccagagtggccgtgtacatcaccaaaatg
catctggacaagagaaagaaagagggactcccagccaaagtcatagtcctggtcaacaag
gtgcctttggtggagcagctctactctgaggagttctccaaattcctgaagcccacgtac
aaagtggagagagtcagcggaaactcggagctcaaaatcactttcacagagatcgtgaag
atgtatgacgtggtggtgtgcacggcgcagatcctggagaactccttagagaggtctgtg
agcggagaggacgagggggtgaatttaagtgatgtgtccttgatcgtgatagacgagtgc
caccacacgcagaaaggaggcgtctacaaccacatcatgatgcgcttcctcacccaaaaa
cacaagaacaagaagctggagaaggagcagaaggagaccacgcccctgcctcagatcctg
ggcctgaccgcttcaccgggagtgggcggagctactaagatgtccaaaacggaggagcac
atactgcgaatctgcgctaacttggatgcctccaccatcatgaccgcaaacctggggaag
tactcaaaggagtcgctcaaaaaagtggaaggaattgaagcccgaaaggcggatcctttt
ggtgatgtcatcaagaaaataatgaatgacatccacacacacgctgagctgaacccgggc
catgagtgcggctctcagacgtatgagcaatgggtggttcagacagagagagaggccgtc
aaagaggcaaaggagaagctgcgggactgcgccgagcacctgaaacagtacaacaccggt
ctgcagctgagcaacaccatccgaatgtgtgacgccttcagcttcctcaactctttttat
gaagatgagaagaaaaagaagacttctccagatggggagcttatcgacaccactgacact
gagagattcctcttcaacctgtttgacggaaacaaagacaagctgaaggagctcgccaaa
cagcctgagtatgagaacgccagtctgtccaagctacggcacacgatcctccgtgagttc
agcaccaaagacaaggccagaggcatcattttcaccaagacacgacgcagcgctattgcc
ctggcacaatgggtacgggacaacgccaagttcggagacctgatcgtgaacgccgccttt
ctgatcggtggaggagaccaaagcgatgtcaaacccatgacatcggccgagcaaaaggac
gtgttgaagaagtttttgcacggcgagatcaacttgctgatcgctacaaccgtggcagaa
gaaggtttggacatcccagcgtgtaactttgtcattcgatacggcctcgtcaccaatgag
attgcaatgattcaggcgcgcgggcgaggccgggcagacaacagcacctacactctggtc
gagatcgaaggctccaacgtggccgaaaaagaaacggtcaatgagtttcggatcaacatg
atgaacaaagcgatctcaaagataagagtcttaaagcagaatgactacgacaaacggatt
ctggagttccagatccaggccattatggaagaaaaactgcgagtgaaaaagagcaagcag
aaaaagatcagggacagcagcccgtccaaactgaagttagtctgtcgaaagtgtaacatc
gacgcgtgcaccggagacggcatcaaaatcatcgaaaacatgcatcgagtcaatctgtca
ccagagttcagcaaactgttcatggtgaaagaaaacaacacccttcgagagcggaatctg
gattatgagaccaacggttccattgcctgtaaaaagtgtggcaacccctggggttcaatg
atgttttaccgcgggatcgactgcccctgtctccacgtcaagaactttgctgtgacgtta
aatgggaaaaagataagcaagtgcgccaagtggagtgagcttcctgtcaagtttctcgac
ttcgactacgtcagctacgcctcccaaatggattccaactcagatgaggaagaagaagag
gaagaagaggaaatagaggattag
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integrated database retrieval system
