Eucyclogobius newberryi (tidewater goby): 140359783
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Entry
140359783 CDS
T10929
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140359783 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eny03041
]
140359783 (sf3b1)
03036 Chromosome and associated proteins [BR:
eny03036
]
140359783 (sf3b1)
Spliceosome [BR:
eny03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140359783 (sf3b1)
Complex B
140359783 (sf3b1)
Complex C
U2 SnRNP specific factors
140359783 (sf3b1)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140359783 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_ECM29
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
DUF5870
UNC45-central
GST_N_4
DUF2298
Motif
Other DBs
NCBI-GeneID:
140359783
NCBI-ProteinID:
XP_072301060
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MAKIAKTHDDIEAQILEIQGRKAALVEEGGDEGVGLDSTGFFDQEIYGGSDSRFAGYVTS
IAANEQEEDDEEDTATSLLGPKKPGYHAPVAILNAIPQSDEQYDPFAEHRPQKIADREDE
YKARRRQMIISPERLDPFADGGKTPDPKMQVRSYMDVMREQNLSKEEREIRQQMAEKAKS
GELKAVNGSAAAQAAAAAAAAAKRKRRWDQTADQTPTNTTPKKISSWDQADGSEVITGHT
PAHTPSNSRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRGDTPGHATPGHG
GATGSVRKNRWDETPKTERETPGHGSGWAETPRTDRGEDSVGETPTPGASKRKSRWDETP
ASQMGSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDD
ELDAMFPEGYKVLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQVEDRTTKQMNDQPSG
NLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDK
AREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLL
IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP
SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR
TISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYA
NYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHR
MALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAT
DIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNN
KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
VIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFEL
LELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAET
CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
VHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIG
PCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQIYNDEKNMYVRYELEY
VF
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacccacgacgacatagaggctcagatcctggagatccagggg
cggaaggctgccctggtcgaggaaggaggcgatgaaggagtcggccttgattcaacagga
ttttttgatcaggagatctacggtggcagcgacagtcgttttgctggatatgtcacatct
atcgctgccaatgagcaagaagaggatgacgaggaagatactgctacaagtttgttggga
ccgaagaagccgggctatcatgcaccagtggccattcttaacgccattccacagtcagac
gagcagtacgacccttttgctgagcaccggccacagaaaatcgctgatcgtgaagatgag
tacaaagccagacgcagacagatgatcatctcccctgagcgtctcgacccatttgctgat
gggggcaaaacgccggatcccaagatgcaagtcaggtcttatatggacgtcatgagggaa
cagaatctgtccaaagaagagagggagatccgccagcagatggcagagaaggccaagtcg
ggagaactgaaagctgtgaacgggtctgcagccgcccaagctgctgctgctgctgctgcc
gctgcaaaacgtaagcgccgatgggaccagactgctgatcagactccaaccaacacaact
cccaaaaaaatatccagctgggaccaggctgatggctctgaggtaataacaggtcacacc
cctgcccacacaccctcaaacagcagatgggatgaaactccaggtcggccgaagggcagc
gagaccccaggagccacccccagtacacgcatgtgggaccccactcccagccacactccg
gctggtgctgccactcctggaagaggagacacaccaggccacgccacaccagggcacgga
ggagccacaggcagtgtccgcaaaaaccgatgggatgaaactccaaaaacggaaagggag
acccctggccatggcagcggctgggctgagactccacgcacagacagaggagaggattct
gtgggcgagactccaactccaggagccagtaaaaggaagtctcgctgggacgaaactccc
gccagtcagatggggtcctccacgcctttactaacgccaggaaaaactcctattgggaca
cctgcaatgaacatggctacaccaacaccaggtcacctgatgagcatgacacccgagcag
cttcaagcgtggcggtgggagagggaaattgatgagagaaatcgacctcttacagatgat
gagttggacgccatgtttccagagggttacaaggtgttgcctccaccagcaggttatgtt
ccaattcgcacccctgcacgaaaacttgctgccacacccactcccattggggggatgacc
ggatttcacatgcaggttgaagaccgcaccaccaaacaaatgaatgaccagccgtcagga
aatctgcccttcctcaaacccgatgacatccagtactttgacaaactcctggtggaggtg
gatgagtcaacattgagtccagaagagcagaaggagaggaagatcatgaaattgctactg
aaaattaagaatggaacacccccaatgcgaaaggctgccctgcgccagatcacagacaag
gcacgtgaatttggagcaggccctctgttcaatcagattctaccactgctcatgtctcca
accctagaagaccaagagcgccatcttctggttaaggtcatcgaccgtattctgtacaag
cttgatgatttggtccgaccatatgtacacaagatcctggtggtgattgagcctttactg
attgatgaagattattatgccagagttgaaggaagagagatcatctcaaatttggcaaag
gccgctgggttggctacaatgatctcaactatgcgtcctgatattgacaacatggatgag
tacgtcagaaacacaaccgctagagcctttgctgtggtggcctctgctctgggaatcccc
tccctgctgcccttcctcaaagccgtgtgtaagagtaagaagtcctggcaggccagacac
actggcatcaagattgttcagcagattgccatcctcatgggctgtgccattctgccccat
cttcgcagcttggtggagattattgaacatggtctggttgatgagcaacagaaagtcagg
accatcagtgccctggctattgctgcattggctgaagctgcgacaccatatggtattgag
tcatttgactcggtccttaagcccctctggaagggtatcagacagcacagaggaaagggt
ctggctgctttcctcaaagccattggatacttgatccctttgatggatgctgagtatgca
aactactacaccagagaagtgatgttgatcctcattagagagttccagtctcccgatgaa
gaaatgaaaaagattgtcctgaaggtggtgaagcagtgctgtggcactgatggtgtggag
gctaattacattaaaacagagatcctgccccccttcttcaagcacttctggcaacacaga
atggctctggacaggcgcaactacagacagttggtggacacgacggttgaattggccaat
aaagttggtgcagcagaaatcatttctcgcatagtagatgacctaaaggatgaggcagag
cagtacagaaagatggtgatggagaccattgagaagattatgggtaaccttggtgccaca
gacatcgatcacaagcttgaagaacagttgatagacggtatcctgtatgccttccaggag
cagacaacagaggactccgtgatgttgaacgggtttggcactgtggtcaatgctctgggg
aagcgagtgaagccgtacctgcctcagatatgcggtacagtgctttggcgtctcaacaac
aaatcggccaaagtccgacagcaggcggcagatctcatttcccggacagctgtcgtcatg
aagacctgtcaggaggaaaagctgatgggtcacttgggtgtggtgttgtacgagtacctg
ggagaagagtatcccgaagtacttggtagcatcctgggtgcattgaaggctattgttaac
gttattggtatgcacaagatgactcctccaatcaaagacttgcttcctcgtttaactccc
atcctcaagaacagacatgaaaaagtgcaggagaactgcattgatcttgttggcagaatt
gcagacaggggagcagagtatgtgtcagccagagagtggatgaggatctgttttgaattg
ctggaactgctcaaagctcacaaaaaggctatccgtcgagccactgtcaacacatttggt
tacattgctaaagccattggaccccatgatgtgttggcaactttgcttaacaatttaaag
gtccaggaacgacagaatcgagtctgtaccactgtggctattgccattgtagcagaaacg
tgctctccttttactgtcctgccggccctcatgaacgagtaccgtgtgcccgagctcaat
gtccagaatggtgtcctcaagtcgctttccttcctgtttgaatacatcggagaaatgggc
aaagattacatctatgccgtcacacccctgctagaggacgcgctcatggacagagatttg
gtccatagacagaccgccagtgccgtggtacagcacatgtctcttggtgtctatggtttt
ggctgtgaagactcactcaaccacttactgaactacgtttggcccaacgtatttgaaacc
tcacctcacgttatccaggctgttatgggcgctctggagggactgagggttgctattggt
ccttgtcgcatgcttcagtactgtttacagggtctgttccatccagccagaaaagtgagg
gatgtctactggaagatctacaactcaatctacattgggtcacaagacgctctcatcgca
cactatccacagatctacaatgatgagaagaacatgtacgtccgatacgagctggaatat
gtcttttaa
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integrated database retrieval system
