Eucyclogobius newberryi (tidewater goby): 140360033
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Entry
140360033 CDS
T10929
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a
KO
K06823
collagen type XVIII alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eny04147
]
140360033 (col18a1a)
00535 Proteoglycans [BR:
eny00535
]
140360033 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:
eny00536
]
140360033 (col18a1a)
Exosome [BR:
eny04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140360033 (col18a1a)
Proteoglycans [BR:
eny00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
140360033 (col18a1a)
Glycosaminoglycan binding proteins [BR:
eny00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140360033 (col18a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
140360033
NCBI-ProteinID:
XP_072301433
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MGSRRRLPVLVLAFGCVLLLALGPGPVAPQRWTEDSGVSLLQLIGDPPPEEIEREFGPDN
TPGYVFGAAANTGQLARAHLPNPFHRNFALLFHLKPTTERAGVVFSVIDEAQRVMYVGVK
LSQVQDNNQEVILFYTERGAGVSHEAARFPVPSLKDQWTRLALAVDGDTVKFYLNCDAEP
QVTRLQRSPGPVELEPGAGVFVGQAGGADADKFLGVFSELRIVGDPRAAERQCEDDEDDS
DMASGEGSGDDSPRNHARTALTTSPPPLREPPVTRPNEPDEVADRRHETRGIVIPESRLY
TALESGPGAPGPRGEKGDRGEKGERGPQGPKGDAGSGSSSSRGASGGAKGEAGEKGSKGS
AGFGYQGSKGEPGPAGPAGLPGPPGPPAEFSVNRDGTVVSTAPGPRGPPGAPGAQGTAGE
DGEPGDPGEDGKTGPQGPQGFPGTPGDTGPKGEKGDHGEGQPGLRGPPGPPGPPGPGQRS
TFVDMEDGSGFPDLETFRGPPGVPGLPGPPGPPGPLSSGTALSSGAFGPPGKDGAPGQPG
RPGLPGTEGLVGRPGPKGERGDSGDSGRPGAGGAKGDQGEPGVPGTPGETGLAGLPGPMG
PVGPAGPPGPPGPGRSRTGFDDMEGSGGFGLPGLRGPEGPQGPPGFPGLPGKPGLPGFPG
QKGSEGTQGRDGQPGLDGFRGPQGPKGDRGDRGDRGEAGRDGTGQPGPPGAPGPPGQIIY
RSPGSFDSDPSSVGPQGGPGLPGQAGFPGPTGPKGEHGEPGIPGYGLKGEKGEPGLVVGP
DGSLLRLDGLSGQKGNRGAVGPIGPAGPQGPHGMKGEIGMPGRPGRPGVNGYKGEKGDPA
SGPGFGNAGPPGPPGPPGPPGPYDRFNRFEDNARSSGGQKGEKGDQGERGVPGVPGSGSF
DVYSYLNDLKGAQGDTGLKGEKGEPSGGSFDPNSIPHGPPGPAGPPGLPGPKGDSVVGFP
GPQGPPGVPGVGYDGRPGAPGPPGLPGNPGSSVPGGYPPVTVPGPPGPQGPPGSPGHSSG
VTVLSSFDLMMTTARGQPEGSLIYILDKADLYLRVREGIRQVLLGDYNPFFRDLENEVAE
VHPPPVVVYPQSPAHNPDQSRDQSRDQSRDQSRDQSRDQGQNNGAGHYSESVIRPLEPPA
YSPEPAYPPRFDPRFPDPRLSQAGHTDSSQAPDRTQNRYPYPAVTPQRRPNPNLNPHLET
GATGLHLIALNLPQSGNMRGIRGADFQCFQQARAVGLKGTFRAFLSSKLQDLYTIVRKSD
RDGHRILNLKGQLLFENWESIFGDDARKLRENVPIYSFDGRDILRDSAWPEKMVWHGSSS
TGQRQTDNYCETWRAGDRAVSGWASSLSTGLLLHQTSSSCSAQYIVLCIENAFTTHARK
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgaggaggcgtctcccggttttggtgctcgctttcggctgcgtcctgctgctc
gcgcttggtcccggtcccgtggctccgcagcggtggacagaggacagcggcgtgtctctg
ctgcagctgatcggggacccgccccctgaagaaatcgagcgagagttcggccccgacaac
acgcccggatacgtgttcggcgcggccgctaacaccgggcagctagctcgcgcgcacctg
cccaatccgttccaccgcaacttcgcgctgctcttccacctgaagcccaccacggagcga
gcgggcgtggtcttctccgtcatcgacgaagcccagagggtcatgtacgtcggggtcaaa
ctgtcccaggtccaggacaacaaccaggaggtgatcctgttctacacggagcgcggcgcc
ggcgtcagccacgaggcggcccgcttccccgtcccgtcgctgaaggaccagtggacgcgt
ctggctctggccgtggacggggacacggtgaagttttacctgaactgtgacgccgagccg
caggtgacgaggctgcagcgctcgcccggccccgtggagctggagccgggggccggagtg
ttcgtgggacaggccggaggggccgacgccgacaagttcctgggcgtgttcagtgagctg
aggatcgtgggcgaccccagagcagctgagcggcagtgtgaggacgacgaggacgactcc
gacatggcgtctggagaaggaagcggcgacgattcccccagaaaccacgcaagaactgca
cttacaacgtctcctcctcctttacgagaacctccagtgaccagacccaacgagcccgac
gaggtcgccgacaggcgccacgagacccggggaatagtgatccctgagagccgtctgtac
acagccctggagtctggccccggggccccaggacccagaggagagaagggtgacagagga
gagaagggcgagcgaggaccccagggacccaagggagacgccgggtcgggcagcagcagc
agccgaggagcgtccggcggagcgaagggagaagccggagaaaagggatccaagggcagt
gccgggtttgggtaccagggctctaaaggtgagcctggtcctgctggccccgcaggcctc
cccgggcccccgggtcctccagctgagttctctgtgaacagggatgggactgtggtttcc
actgcgcctggccccagagggcccccaggagcccctggagcacaaggaacagccggagaa
gacggagaaccgggcgatcctggtgaagatggaaaaactggccctcaaggacctcaagga
ttcccagggacccccggagacaccggccccaaaggagagaagggcgatcatggagagggc
cagcctggactcagaggccccccagggccccccggaccccccggacccggacaacgatcg
accttcgtggacatggaggacggatctggatttcctgatcttgagacgttcagagggccc
cccggagtgccgggcctccctggaccccctgggccccccggccccctctcctccggcacg
gctctgagctccggcgcgtttggacccccggggaaagacggagcccccggtcagccaggt
cggcccggtctgcctgggacagaagggctcgtgggacgcccaggacctaaaggagaacgg
ggagactctggagactcgggacgtcctggagccggaggagcaaagggagaccaaggagag
ccaggtgtgcctgggactcctggagagacgggtctggctggactcccaggacccatgggc
ccagtgggacccgccgggccccccggacccccagggccaggcaggtccaggaccggattt
gatgatatggaaggctctggaggatttggacttcctggactcagaggaccagagggacca
caggggcctcctggattccctggacttcctggtaaaccagggctgcccggcttccctgga
cagaaggggtcagagggcactcagggcagagatggacagcccggtcttgatggattccgt
ggacctcagggtcctaaaggcgacagaggagaccgaggagacagaggtgaagcaggtcga
gatggaactggacaaccaggacctccaggagctcctggacctccaggccagatcatctac
aggagcccaggcagctttgattcagacccgagcagcgttggacctcagggaggaccaggt
ttgcccggtcaggctggattccccggcccaactggacctaaaggagagcatggagagcct
ggtattcctggctacggtctgaagggggagaagggcgagcccgggctggtggtcggtccg
gacggaagtctgctccgactggacggactcagcggtcagaagggcaacagaggagccgtg
ggccccattggacctgccggtccacagggtcctcacgggatgaagggcgagatcgggatg
cctgggcgacccggtcgtcccggtgtgaacgggtacaaaggagagaagggagatccggct
tcagggcccggctttggaaacgctggccccccaggcccccccgggccccccggaccacct
ggaccctacgaccgcttcaatcgttttgaagacaacgccaggagttctggaggtcagaaa
ggagagaaaggagaccaaggagagcgaggagtgccaggagtgccaggatcaggcagcttt
gacgtgtactcgtatctgaatgacctgaagggggcgcaaggagacaccggcctgaaggga
gagaagggagagcccagcggaggctcgtttgatccaaactccatcccacatggaccacct
ggacctgctggaccaccaggactacctggtccgaagggcgactcggtggtaggctttcct
ggaccccagggtcctcctggagttcctggtgtgggttacgatggacggccgggggcccct
ggtccccccgggctcccaggaaaccctgggtcatcagttcctggcggatatccaccggtg
acagtccctggccctccagggcctcagggtccccctggctctcctggacactcctctggg
gtgactgttctgagctcctttgacctcatgatgaccactgctcgtggtcagcctgaggga
agtctcatctacatcctggacaaggccgacctgtatctgcgagtgcgggagggcatccgg
caagtcctgctcggcgactacaatcccttcttcagagatctggagaacgaggtggcagaa
gtgcaccctcctccagtggtggtctaccctcagtcccccgctcacaaccccgaccagagc
cgggaccagagccgggaccagagccgggaccagagccgggaccagagccgggaccagggc
cagaacaacggcgcgggacactactccgagagcgtcatccggccgttggagcctcccgcg
tacagtccggagccggcgtaccccccgcgcttcgacccgcgcttccccgacccgcggctc
tcgcaggccgggcacacggacagcagccaggcccccgacaggacgcagaaccgctatcct
taccctgcagtgactccgcagaggagacccaacccgaacctgaaccctcacctggagacc
ggagccacagggttacacctgatcgcgctgaacttgcctcagtccgggaacatgaggggc
attcgaggggcagatttccagtgtttccaacaggcccgagccgtgggcctcaaagggacg
ttcagggcctttctgtcctccaaactgcaggacctctacaccatcgtgcgcaagtcggac
cgagatggacaccgcatcctcaatctgaagggtcaacttctgtttgaaaactgggagtcg
atcttcggagacgacgcccgcaaactgagggagaacgttcccatctactccttcgacgga
cgagacattctcagggacagcgcctggccggagaagatggtgtggcacggctccagctcc
acgggccagcgccagacggacaactactgcgagacgtggagggcgggcgaccgggcagtg
agcggctgggcgtcgtccctgagcacgggactcctgctccatcaaacctccagctcctgc
agcgcccagtacatcgtcctgtgcatcgagaacgcattcaccacgcacgcccggaaatga
DBGET
integrated database retrieval system
