Eucyclogobius newberryi (tidewater goby): 140360500
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Entry
140360500 CDS
T10929
Symbol
rad50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03440
Homologous recombination
eny03450
Non-homologous end-joining
eny04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140360500 (rad50)
03450 Non-homologous end-joining
140360500 (rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
140360500 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eny03032
]
140360500 (rad50)
03400 DNA repair and recombination proteins [BR:
eny03400
]
140360500 (rad50)
DNA replication proteins [BR:
eny03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
140360500 (rad50)
DNA repair and recombination proteins [BR:
eny03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
140360500 (rad50)
BRCA1-C complex
140360500 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
140360500 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
zf-met
AAA_29
AAA_13
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
140360500
NCBI-ProteinID:
XP_072301819
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIDKMSILGVRSFGIEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLRYATAGELPPG
SKGGAFVHDPKDAHETDVRAQIRLLFTDVNGEKVTIHRSMSCTQKAKNYSFKSLEQVITR
MKDGEKVSLSSKCGELDREMISALGVAKPVLNHVIFCHQEDSNWPLSEGKALKDKFDSIF
AATKYIKALDTMRQQRLKQNQTVKECQVEMRYLKQNKEKAQQIRETVSTKEAQLMASKDR
VEKIEGQIDPLENRLMDIDMKLGKVMKLDNDIKALESRKKQMESDNRELEETMEQVFQGS
AEQLQDLYQNHQKTVREKERRLTEGQRDLERAGRECERLNRVKSDLLVEQGRLQLEADRH
SQNIKSRDSQVRSVSSFLELEGYDRTPFTKLQLESFHRQVSQRLEQEKQTLSQILADLQE
KELQKQRSMDDMRDKKTRLEGTVELKQDLQTKKQQELKNIKADLQRLEGSSGRLQELESE
LTKAERELQGVLQNSNVDKLKAEVLDLQREKATLDQTQRRLDQEMETLNTHTTARTQMEM
LNKDKTEKDEQVRKIKSRHSEDLVSLLGHFPNKRELEDWIYSKSKDINATRDRLAKLNKD
LASNEQNKSHVGAELRKKEQQLSGDEEKFFNVCGSQDLESDLSKVQDDLEKVSKQRAMLA
GATAVYTQFISQLSEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK
RKEKKKEEMMSLRPVRESIARLQEKELPELRNRLQTVNRDIERLKGEVETQETLLGTLMS
EEETAKACLQDISLMDRYLMDLKEVERKIAQQAAKLLGVDLTRTIQQVSQEKQETQHKLD
TTSSKMELKRKLIQDQQEEIQRLKSSVNETRAEKLQLSSDMQRQQQLEEQCGEFSSDIKA
LSRDITDAKEQLSPLSTALDKLQQEKQEILERKRQKQEEGQEKLNAIKERMKVVSSLERE
IGKYTEERKDEYKEQKESELRETSQQLHEADKQKEKINKDIGNIRQDIDTQKVQERWLQD
NLTLRKRVEELKEVEAKRETLLKDMGSMQVLQLRQERRDLERKLEDMKKDRSIALGRQKG
FEEEILHYRKELREDQYDKAEECYKNKMIVMRTTELVIKDLDLYYKALDQTIMKFHSMKM
DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRVYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR
NFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEITKCSISSLSSYLH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatagacaagatgagcatcctcggggtgcgcagcttcgggatcgaggacaaa
gacaaacaagtcatctctttctttagtcccctgactgtgctggtcggacccaacggagcg
gggaaaacgacaattatcgaatgtctaagatatgcaacagcaggagaacttcctccaggg
tcgaaaggaggcgctttcgtccacgatccaaaggacgcccacgagaccgacgtgagggcg
cagatccgccttttattcaccgacgtcaacggggagaaagtcacaatccaccgctccatg
tcctgcacgcagaaggccaagaactactcgtttaaaagcttggaacaggtcatcacccgc
atgaaggacggcgagaaggtgagcttgtcgtccaaatgcggcgaactggacagagagatg
atttcagctctgggcgtggccaagcccgtgttgaaccatgtgatcttctgccatcaagaa
gactccaactggcccctgagcgagggcaaggcgctgaaggacaagtttgactccatcttt
gctgcaactaagtacataaaggctctggacaccatgcgtcagcagcgtctgaaacaaaac
cagacggtgaaggaatgccaggtggagatgcgctacctgaagcagaacaaagagaaggct
cagcagatccgcgagacagtttccaccaaagaggcgcagctcatggcctccaaagaccgc
gtggagaagatcgagggccagatcgaccctctggagaaccgcctgatggacatcgatatg
aaactgggcaaagtgatgaagctggacaatgacatcaaggccttggaaagcagaaagaag
cagatggagagcgacaacagagagctggaggagacaatggagcaggttttccagggctcg
gctgaacagctgcaggacctgtaccagaaccaccagaagacggtgagggagaaggagcgc
agactgaccgagggccagagagacctggagcgagcgggccgcgagtgtgagaggctcaac
cgggtcaaatccgatctgctggtggagcaaggtcgtctccagctcgaggccgatcgtcat
tctcagaacataaaaagccgtgactctcaggtgcgctcggtctcatctttcctggagctg
gagggatacgaccgaactccattcaccaaacttcagctggagagttttcaccgtcaggtt
tctcaaagactggagcaggagaaacagacgcttagtcagatcctggccgatctgcaggag
aaggagctccagaagcagcgctccatggacgacatgcgcgacaagaagacgcgcctggag
ggaaccgtggagctgaagcaggacctgcagaccaagaagcaacaggagctcaagaacatc
aaagccgacctgcagcgcctcgagggctcgtccggacgcctgcaggagctggagagcgaa
ctgaccaaagcggagcgcgagttacagggcgtgctgcagaactccaacgtggacaagttg
aaggcggaggttctggatctgcagagggaaaaggcgacgctggatcagactcagaggcgc
ctggatcaggagatggagacgctgaacacgcacaccacggcccgcacgcagatggaaatg
ctcaacaaggacaagacggagaaagatgagcaggtccgaaagatcaagtctcgtcacagt
gaggatttggtgtcgctgctcggtcatttccccaacaagcgggagctggaggactggatc
tacagcaagtccaaagacatcaacgccaccagggaccggctggctaagctcaataaggac
ttggcctcgaatgagcagaacaagagccacgtcggagccgagctgcgtaaaaaggagcag
cagttgagcggcgatgaggagaagtttttcaacgtctgcgggagccaggacctggagtcg
gacctgagcaaagtgcaggacgatttggagaaggtctcaaaacaaagagccatgttggcc
ggagcgaccgctgtgtacacgcagttcatcagtcagctgagcgaggagcgagagccgtgc
tgccccgtgtgccagcgcacgtttccctccgagtccgacctgcaggaggtgatcagcgac
atgcagtccaagctccggctggtgcccgacaaactgaagaacacggagcaggatctgaag
aggaaggagaagaagaaggaggagatgatgtcgctgcgaccagtcagagagtccatagct
cgtctgcaggagaaggagctgccggagctgaggaaccggctgcagacggtgaaccgcgac
atcgagaggctgaagggcgaagtggagactcaggagacgctgctcggaacgctcatgtcc
gaggaggagacggccaaggcctgtctgcaggacatctctctcatggaccgatacctgatg
gatcttaaagaagtggagaggaaaattgctcaacaggcagctaaactgctgggagtggat
ctgaccaggaccattcagcaagtcagtcaagagaaacaggagacgcagcacaaactggac
accacctccagtaaaatggaactgaagcgtaaactgatccaggaccagcaggaggagatc
cagagactgaagagttctgtgaacgagaccagagccgagaagctccagctcagtagcgac
atgcagcggcagcagcagctggaggagcagtgtggcgagttctcctccgacatcaaggct
ctcagcagagacatcacggatgccaaagagcagctgtctcctctgtcgactgcactggac
aaactgcagcaggaaaaacaggagattttggagcgaaagaggcagaaacaagaggagggc
caagagaagctgaacgccattaaagagagaatgaaggtggtcagctcgttggagcgggag
attggaaaatataccgaagagagaaaagatgaatacaaagagcaaaaagaatcagagctt
cgagaaaccagccaacagcttcatgaagccgacaaacagaaggagaagatcaacaaagac
atcggcaacatccgccaggacatagacacccaaaaggtgcaggagcgctggctgcaggac
aatctcaccctgaggaaacgggtcgaggagctgaaggaggtcgaggccaaacgagagact
ctgctcaaagacatgggcagcatgcaggttctgcagctccgacaagagcgccgtgatcta
gagcgaaagctggaggacatgaagaaggaccgcagtatcgctctggggcgtcagaaagga
tttgaggaggaaatacttcactacaggaaagagctgcgcgaggaccagtacgacaaagct
gaagagtgctacaaaaacaagatgatcgtgatgagaaccaccgagctcgtcatcaaagac
ctggacctgtactacaaggccctggatcaaacaattatgaagtttcacagcatgaagatg
gacgagatcaataagatcatccgggacctgtggcgcagcacgtacaggggccaagacatc
gagtacgtggagattcggtctgacgtggatgagaacgcctctgctggagtcaagcgcagg
gtttacaattaccgagtggtgatggtgaaaggagacacggctctggacatgagggggcgc
tgcagcgctggtcagaaggttctggcgtcgctgatcatccgtttggctctggccgagacc
ttctgtctgaactgtggcattctggctctggacgaacccaccacgaacctggaccgggaa
aacatcgagtccctggcccacgcgctcgtagaaatcatcaagagccgctctcgccagcga
aacttccagctgctgatcatcactcacgacgaggacttcgtggagctcctgggacgctcc
agctacatcgaacacttttaccgcatccgcaagaaccaggatcagaactccgagatcacc
aagtgcagcatctcctccctgtcgtcgtatctgcactga
DBGET
integrated database retrieval system
