Eucyclogobius newberryi (tidewater goby): 140360707
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Entry
140360707 CDS
T10929
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140360707 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eny03041
]
140360707 (ddx46)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140360707 (ddx46)
Spliceosome [BR:
eny03041
]
Complex A
U2 snRNP components
U2 related factors
140360707 (ddx46)
Complex B
140360707 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
BHD_3
Motif
Other DBs
NCBI-GeneID:
140360707
NCBI-ProteinID:
XP_072302139
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MGRESRHYRKRSGSRGRSGSRSKSRSPDKRSKKEERDRGRRERTRSRERRRSRSRDRKRP
RRSRSRDRRRSKSRERRSRGKRSRSGSKGRKTDENKEKDGPDSAAEKKKVKEEKEDEKVV
DQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKKWSLEDDDDDD
DDNSAPMEADDDEEAGGDGKDVKDKDAQEELKEEGDEAKEPPMEQEAEEDDVDPLDAYME
EVKQEVKKFNMGGVNDKAKGAMTVTKVVTVTKTKKGPNVHKKKGELMENDQDAMEYSSEE
EEVDLATALTGFQTKQRKVLEPVDHGKIVYEPYRRNFYVEVPELAKMSTEDVMAYRSELE
GIIVKGKACPKPIRTWVQCGVSMKILSALKKHSYEKPTPIQAQAIPAIMSGRDLIGIAKT
GSGKTIAFLLPMFRHIMDQRPLEEAEGPISVIMTPTRELALQITKECKKFSKNLGLRVVC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRSTYVVLDEADRMFDMG
FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVL
VIEEEKKFLKLLEILGHYQEKGAVIIFVDKQEHADALLKDLMKASYPCLSLHGGIDQYDR
DSIINDFKTGVCRLMVATSVAARGLDVKHLILVVNYGCPNHYEDYVHRAGRTGRAGNKGY
AYTFITEEQARYAGDIIKGLELSGSTIPPELEQLWASFKDQQKAEGKSIKSSSGFSGKGF
KFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDLAAPGSSLA
GSGAVTSSAASSGGSGGAGGPTSAGNIQKLEMAKRLALKINAQKNLGAEAQDVMQQATNA
ILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKIEEEKQGTEQTETVKRYEEELEIN
DFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKDPKEGERKIYLAIESANELAVQ
KAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgaatcgaggcattacagaaagcgctctggatcacggggtcgatccgggagc
cgctcaaagagccgctcgccggataaaaggtccaaaaaggaggagcgagacagaggccgg
agagagcggacgcgcagcagagaacgcagaaggtcccgctccagggacaggaaacgaccc
agacggtcaaggagcagagacagacgcaggtccaagagccgagagcgaaggagccgcggc
aaaaggtcccgctcaggaagcaagggccggaaaaccgacgagaataaggagaaagacggc
ccagactctgcggccgaaaagaaaaaagtcaaagaggagaaagaagatgagaaagtcgtg
gatcaagattttgaccagaacaagcttgaggaggagatgaggaaaaggaaggagcgcgtg
gagaagtggagggaagaacagcggaagaaagccatcgagaacatcggagaaatcaagaag
gagctggaggagatgaagcagggcaagaagtggagcctggaagacgacgacgacgacgac
gacgacaactccgccccgatggaagctgacgacgacgaggaggcgggcggcgacggaaag
gacgtcaaagacaaggatgcccaggaggagttgaaggaggaaggcgacgaggccaaggag
ccgccgatggagcaggaggccgaggaggacgacgttgacccgctggacgcgtacatggag
gaggtcaagcaagaggtcaagaagttcaacatgggcggtgtcaacgacaaggcgaaggga
gccatgacggtgaccaaagtggtgaccgtgacaaagacgaaaaaaggcccgaatgttcac
aagaaaaagggagagctgatggagaacgaccaggacgccatggagtactcgtcagaggag
gaggaggtggacctggcaaccgctctcaccgggtttcagaccaaacagaggaaggtcctg
gagccggtcgaccacggcaaaatagtgtacgagccgtatcgcaggaacttctacgtggag
gtgcccgaactggccaagatgagcactgaagacgtgatggcgtaccgttcagagctggag
ggcatcatagtcaaagggaaagcttgtcccaaacccatacggacctgggtccagtgcggc
gtctccatgaagatcctcagtgctctcaagaagcacagctacgagaagcccacgccgatc
caggcccaggccatccccgccatcatgtcgggccgtgacctcatcggcatcgccaagacg
ggaagtggcaagaccatcgccttcctgctgcccatgttcagacacatcatggaccagcgc
cctctagaggaggccgaggggcccatttcggtgatcatgacgccgacccgagagctagcg
ctgcagatcaccaaagagtgcaagaagttctccaaaaatctgggtctgcgagtggtctgc
gtctacgggggaaccggcatcagcgagcagatcgctgagctgaagagaggcgccgagatc
atcgtgtgcactccggggagaatgatcgacatgctgggagccaacagcggtcgtgtcaca
aaccttcgcagatccacttatgtcgtcttggatgaagcagacaggatgttcgacatggga
tttgaaccacaggtgatgcgtatcgtggataacgtccgtccagaccgacagaccgtcatg
ttttcggccactttcccccgagccatggaggctttggcccggaggatcctgtccaagccc
atcgaggtgcaggtgggcgggcgcagcgtggtgtgctccgacgtcgaacagcacgtgctg
gtgattgaggaggagaagaagttcctgaagttgttggagatcttgggccattatcaggag
aagggcgcggtcattatcttcgtggacaagcaggagcatgccgacgcactgctcaaagac
ctgatgaaggcctcgtacccgtgcctgtccctgcacggcgggatcgaccagtacgaccgg
gacagcatcataaatgatttcaaaacgggcgtgtgccggctgatggtggcaacgtcagtc
gcggcgcgcggcctggacgtgaagcacctcattctggtggtcaactacggctgcccgaac
cactacgaggactacgtgcaccgagcgggccggacggggcgagccgggaacaagggctac
gcgtacaccttcatcacggaggagcaggcgcgctacgccggtgacatcatcaagggcctg
gagctgtcgggctccaccatccctcctgaactcgagcagctctgggcctcgttcaaggac
cagcagaaagccgaagggaagtccatcaaaagcagcagcggcttctcgggaaaagggttt
aagttcgacgagacggagcacgctttggccaacgagaggaagaagctgcagaaggcggcg
ctcgggctgcaggactctgacgacgaggacggagcgctcgacattgaggagcagatcgag
agcatgtttaactctaagaagcgcgtgaaggacttggcggctccaggctcgtccctcgca
ggatcaggagccgtgaccagctccgcagcctcctccgggggctcgggaggagcaggaggg
cccacgtccgccgggaacatccagaaactggagatggccaaacgtctggcgcttaagatc
aatgcacagaagaacctgggagccgaggcgcaggacgtgatgcagcaagccacaaacgcc
atcctccgcggaggcaccatcatgacgccctcggtgtcggccaaaaccatcgcggagcag
ctcgccgaaaagatcaacgccaaactgaactacactccagtggagaagatcgaggaggag
aaacagggcacggagcagacggagacggtgaagaggtacgaggaggaactcgagatcaac
gacttccctcagacggcgcgctggaaggtgacgtcgaaggaggcgctgcagaggatcggc
gagtattctgaggccgccatcaccatcagaggcacttacttcccgcctggaaaagacccg
aaggagggagagcgcaagatctacctggccatcgagagtgcaaatgaactggccgtgcag
aaagccaagactgaaatcacaaggttaatcaaagaagagctcatcagactacaaaactcg
taccagccgaccagcaaaggacgttacaaagtgttgtaa
DBGET
integrated database retrieval system
