Eucyclogobius newberryi (tidewater goby): 140360764
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Entry
140360764 CDS
T10929
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eny03009
]
140360764 (ddx52)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140360764 (ddx52)
Ribosome biogenesis [BR:
eny03009
]
Eukaryotic type
90S particles
Helicases
140360764 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
140360764
NCBI-ProteinID:
XP_072302230
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MDAFDLFRKLGSGAKFDLKRFGQDAARFKTQRPKGAGASDLLSTINYFGSANVREQQLED
DEAVNESDDCDAGVKRRRKDEQADTKTNKKTKKMSKLEVAEPNKAADGEGISWTSDLDKR
IKNPQSGEKEKNSLKRLKHLHQEKVNRIRGQHRINVHGCDVPDPVCTFEEFHSEYRLHSC
ILKTLKDAGLDSPTPIQMQAIPLMMHGREVLACAPTGSGKTLAFCLPLLTHLQQPANLGF
RAVVISPTRELASQTYRELLRLSDGLGFRVHIIDKASLAAKKYGPQSSKKYDILVSTPNR
LIYLLNQDPPALDLSGVEWLVVDESDKLFEAGKSGFREQLATIFLACSGPKVRRAFFSAT
CTPDVEQWCRLNLDNLVTVNIGHRNTAVETVEQELLFVGSEDGKLVAMRDVIKKGFLPPM
LVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVNSFRSGHIWVLICTALLARG
IDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHCGKAITFFTENDKPLLRSIANVIKQTG
CPVPDYMIGFKKMHSKVKRQLEKKPPKRTTISTTPRFLMKKKLNSTQKVKKGAGVEKDSQ
TVVKHKMTQNNTKKQKKQHMQKDKTTENGNKRASKKSPATKIKKIKVKKSQEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttgatttatttagaaagcttggatctggggcaaaatttgatctaaaaaga
tttggtcaagatgctgcgcgatttaagacacaaagacccaaaggagcaggtgcctcagat
cttctttctaccatcaactactttggctcagccaacgtgcgagagcagcagctggaagac
gatgaggctgtgaatgaaagtgacgactgtgatgctggagttaaaaggaggaggaaagat
gagcaagcagataccaaaacaaataagaagacaaagaaaatgtccaaattggaggttgca
gaacctaacaaagctgcagacggagagggaatttcttggacatctgatttggacaaaagg
attaaaaacccgcaaagtggagaaaaggaaaagaactccctcaaaagactgaagcatctt
catcaggagaaggtgaatcgcatccgtggccaacatcgcataaatgtacatggctgtgat
gtccctgatcctgtgtgtacatttgaggagtttcattctgaatatcggcttcattcgtgt
attcttaaaaccctgaaagacgcaggccttgattctcccacaccaatccagatgcaggcc
atacctctgatgatgcatggtcgtgaagtcttggcgtgcgctcctacagggtccggaaag
actttggctttctgtttgcctctgctcactcacttgcagcaaccagccaacttgggcttc
agggctgtggtcatctccccgacaagagagttggccagtcagacatacagagagctactt
cgattgtcagatggattaggatttagagttcacattattgataaagcttccttggcagct
aaaaaatatggtccacagtccagcaaaaaatatgacatactcgtcagtaccccaaataga
ttaatataccttttaaatcaggatcctccagctttggacctcagcggtgtggagtggctt
gttgtggatgagtctgacaaactgtttgaggctggtaagagtggattcagggagcagctc
gcaaccatctttctggcctgttctggtccaaaagtgcgcagagccttcttcagcgccacc
tgtactccagatgtcgagcagtggtgccgccttaaccttgacaacttggtcacagtcaat
ataggacacaggaatacagcggtggagacagtggaacaagagctactgtttgttggaagt
gaggatggaaaactagtcgcaatgagagatgttatcaagaagggtttcttgccacctatg
ttggtgtttgttcagtctatagatcgagcgagggaactctttcacgagctggtgtatgaa
ggcattaatgttgatgtcattcatgcagaccgcacacaacagcagagggacaatgtagtg
aacagttttcgctccggtcacatctgggtgttgatttgtacagcgttgcttgctcgagga
attgacttcaaaggtgtgaacctggtactaaactatgactttcccaccagtgctgtggag
tacatccatagaataggtcgtacgggcagagccggacattgtggaaaagctataacattt
tttacagaaaatgataaacctctcctgcgcagcattgccaacgttataaaacaaaccggc
tgtcctgtccctgactacatgattggttttaagaagatgcacagcaaagtgaagagacaa
cttgagaagaaacctccaaaaagaactaccatttctacaactccacgctttttgatgaag
aaaaagctaaattccacccaaaaagtaaagaaaggagcaggagttgaaaaagattctcaa
accgttgttaagcacaagatgacacaaaacaacacaaagaaacagaaaaaacaacatatg
cagaaagacaaaacgactgaaaatggtaacaagagggcctcaaagaaaagtccagcgaca
aaaataaaaaagataaaggtgaagaagtcacaggaagcatag
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