Eucyclogobius newberryi (tidewater goby): 140361462
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Entry
140361462 CDS
T10929
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140361462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140361462
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140361462
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
140361462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
140361462
NCBI-ProteinID:
XP_072303274
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAVLV
GVKAEIGKPRPMFSNEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKNSVN
LKSLCILKGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPKVHISSDEEGSKEI
ELSDDPYDCMRLDVENVPCIVTLCKVGHRHVVDATLQEKACSVASLLIAVTQKGTVSCLR
KVGGGSLDPESVFEMTETGKRVGKALHAPLMNLLQQEEKLGKSRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagttcaagttagcgaggctgaaaaagtctatattttgcacggaataagggat
gacttgagggtggatggaagaggatgtgaagactacagacacatggaaatagaaactgat
gttgtttccaatacagatggatctgccaaagtcacgctgggacacacagcagttctcgtt
ggggtcaaggcagaaataggaaaaccacggcccatgttttcaaacgaaggatatctggag
ttctttgttgactgttcggctaacgcgacccctgagttcgagggcagaggaggcgaagag
ctgggcactgaactaagcaacactctgtacaaagtgttcaacaacaaaaacagtgtgaat
ctgaagagtctgtgcatcctcaaaggagagcactgctgggtcctctacgtcgatgttctg
cttttgcaatgtgatggaaacctgtatgacgcaatttcagtagcaatcaaggcagcgctc
ttcaacaccaagatcccaaaagtacacatatcttcagatgaagaaggaagcaaagagatt
gagctttcagatgatccttacgactgcatgaggctcgatgtagaaaacgttccatgcatc
gtgactttgtgcaaggtggggcacagacacgtggtggatgcgacgctgcaggagaaggcg
tgctccgtggccagcctccttatcgccgtgacacaaaagggcaccgtaagctgcctgagg
aaagtcggaggagggagcttggacccggagtctgtgttcgagatgacagagacaggaaag
cgtgttggaaaagcccttcacgctccactcatgaatcttctgcagcaagaagagaaattg
ggcaagtcgagacaaaaagtgggattccttggatag
DBGET
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