Eucyclogobius newberryi (tidewater goby): 140361716
Help
Entry
140361716 CDS
T10929
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03250
Viral life cycle - HIV-1
eny03272
Virion - Hepatitis viruses
eny04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140361716 (pdcd6ip)
03272 Virion - Hepatitis viruses
140361716 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140361716 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eny04131
]
140361716 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eny04147
]
140361716 (pdcd6ip)
Membrane trafficking [BR:
eny04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
140361716 (pdcd6ip)
Exosome [BR:
eny04147
]
Exosomal proteins
Proteins found in most exosomes
140361716 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
140361716
NCBI-ProteinID:
XP_072303610
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTATYQGSEEQGEYLRAVDELNKLRKSALGRPLDKH
DSSLEILLRYYDQLCTVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIAAEQNLDSDEGLKAAAKYYQLGSGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMRDGVIAKLANQAADFYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCILQANAELHQSMVAKQKKHFGEEIARLQHSAELVKTVASRYDEYVS
VKDLSEKINRALAAAKKDNDFIYNERVPEVKDLEPIGKAALAKATAVTPPISQKFSDLFE
KMVPMAVQQSMSIYSQRKAETVNRLVGTMREASNLCNGVLASLNLPAALEDLSGDSIPQS
IVEKSHAIIQQGGLQSIEQLIKDLPELLTCNREILDESLKMLNDEETTDNELRSKFDQRW
SRTPSSDLYKPLRAEGANFRNILDKAVQADQVVRDRYNTHCEMIALLCKPENELNAAIPS
ANPTKTLQGSEVVNVLQSLLAQLDEVKSEREVLAGEIKAVTFDMSVTFLTALAQDGAINE
EQLSLAQLEQLYGSYNQRVQASLHKQEELLGRVQTSHQEFSNLKQSNSEANQREEVLKKL
ASAHDSYVEISSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFNVPAYQSTPAAPAAGPTPAPRTVFSQQPQQPPAKAAPPARPPPPATTPQAASGP
PINMPPTALPPNNPSPVAPLTQAQGPPYPAYQGYSGFYQMPVGYNPYPAAAAYGQYYMPY
QAPPGQGYPGAPPSGQPYPGYPQQPPQQQPYYPQQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttctgtcccgttgaagaaatcgtccgaggtggatctagtaaagcca
ctgtcgaagtttgtcaccgctacatatcaaggatccgaggaacagggggagtatctgcgc
gcggtggacgaactcaacaagctccgcaaaagcgctttgggaaggccgctggacaagcac
gacagctccctggagattcttctcagatattatgaccaactgtgtactgttgagcccaag
ttccccttctctgaaaaccagctttgcttaaccttcacatggaaggatgcctttgataaa
ggatctctatttggtggctcagtcaaactggctctggcaagtttgggctatgagaaaaca
tgcgtcctgttcaacgctgcagctctggctagtcaaatcgccgcagagcaaaacctggac
agtgatgaggggctgaaggctgctgcaaaatactaccagctgggcagtggagcttttggc
cacatcaaagacacagtgttgtctgcgctgaaccgagaacccactatggacatctcccct
gagactgttggcactctgagtcttattatgttggcccaggcgcaagaggtcttctttctc
aaagctacttcagataaaatgagggatggtgtcattgctaaactggccaaccaggcagca
gacttctatggagatgctttcaagcagtgtcagtacaaagacaacctccctaagtatttt
tattttcaggaagtgctcccggtgctggcggccaagcactgtatcctgcaggccaatgcc
gagcttcaccagagcatggtggccaagcagaagaaacactttggggaggagattgctcgt
ctgcagcactcagcagagcttgtaaaaacagtcgcatctcgttatgatgaatatgtgagc
gtcaaagacttgagcgaaaagatcaatcgagccctcgcagcagcaaaaaaagacaacgac
ttcatctacaacgagcgcgtgccggaggtcaaagatctggagcccatcggcaaagctgcc
ctggccaaagccacagccgtcactcctccaatcagtcagaagttttcagatttgtttgag
aagatggttcccatggcagtgcaacagtccatgagcatttatagccagaggaaggctgag
actgtgaacagactggtgggaacaatgagggaggcgagcaacctctgcaatggtgtgctg
gcctcactaaaccttcccgctgccctggaggacctgtctggggactcaatcccacagtcc
attgttgagaagtctcatgccatcatacagcagggaggacttcagagcattgagcaactc
atcaaagacctgcctgaactgctcacttgtaacagagaaatcctggatgagtctctgaag
atgttgaatgatgaagagactacggacaacgagctgcgaagcaaattcgaccaacgctgg
agtagaaccccgtctagtgacctctacaagcctctccgtgctgagggtgctaacttccgc
aacattctggacaaagcagtgcaggcagaccaggtggtgcgagaccgctacaatacccac
tgtgagatgatcgctctgctgtgtaaaccagaaaatgagttgaacgctgccattccctct
gcaaaccccaccaagaccctgcaaggaagtgaggtagtgaatgtgctgcagtccctgctg
gcgcagcttgatgaggtgaagagtgaaagagaggtcctggcgggagagatcaaggctgtt
accttcgacatgtctgtcacatttctgacagcgctggctcaagatggcgccatcaacgag
gagcagctctcgctggctcagctggagcagctgtacggctcctacaaccaaagagtgcag
gccagccttcacaagcaagaggagctgctgggacgagtgcagacatcgcaccaggagttc
agtaacctgaagcagtcaaactctgaggccaaccagagagaggaagtcctgaagaagctg
gcctcagctcacgacagctacgtcgagatcagcagtaacctgcgcgaaggcaccaagttt
tacaacgacttgacagaaattctactcaagttccagaacaagtgcagcgacattgttttc
gcacgcaaaacggagcgtgatgaactacttaaggatttgcagcaaagcattgcacgtgag
cccagtgctccatcctttaatgtacctgcatatcagagcactcccgctgcccccgccgct
ggacccacacctgctcccaggactgtgttttctcaacagccacagcagccaccagcgaag
gccgcccctcctgccagaccccctccccccgccaccactcctcaagcagcctcaggacct
cccatcaacatgccgcccactgccctgccccctaacaacccttcacctgtggctcctctc
actcaggcccagggacccccgtacccggcctaccagggttattcaggattctaccaaatg
ccggtgggttacaacccctaccctgccgctgctgcctatggacaatactacatgccgtac
caggcccctccaggacaaggatacccgggagcgcccccttctggacaaccatatcccggt
taccctcaacaaccccctcagcagcagccctactatccccagcaataa
DBGET
integrated database retrieval system
