Eucyclogobius newberryi (tidewater goby): 140361758
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Entry
140361758 CDS
T10929
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
eny03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140361758 (smarcc1b)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140361758 (smarcc1b)
PBAF complex
140361758 (smarcc1b)
GBAF(ncBAF) complex
140361758 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
140361758
NCBI-ProteinID:
XP_072303688
LinkDB
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Position
Unknown
AA seq
938 aa
AA seq
DB search
MSGGANPTFPGVNPSCTVMSPHKRKDSGPSTRFWESPETLAQLEAVRQWIGKHYKKYVLV
DAPSCQTLSMVTMQLMQFQEDVFGREASLALTKLPTQCFMDLHPGGGLCHILGIAYKFKA
EQGWRRFDLQNPSRTERNTEMFHSIERALVQNNCLSFPVLYLDPTVDQELAERLRGIITK
HQGSLTEDRVLASHHIYPALAAPEEDEWMRAVMQREKHVLVHWGMYPDSYDSWLSSLEVE
GAIEEPPLDRPWKVHAAWVLDTDRFNEWMNEEDYCVDERNVPVIFRHRIPLRDQDSQSTP
PKKRRRSTSPPSSEVRKKGKKGRKRGQQEEEPEEDLTKDMEDPTPVPNMEEVILPKIVNL
KKDSENTPVKGGIMADLDDQEEDYPGREDEEGRVEMSRFLEGEENITEQTHHVIIPSYTS
WFNNNSIHSIEKRSLPEFFNGKNKSKSAEIYLAYRNFMIDTYRLNPQEYLSSTSCRRNLT
GDVCAVMRVHAFLEQWGLLNYQVDAESRPLPMGPPPTPHFNVLADTPTGLAPLQHKPLQV
SASQHMLYFPDRGREKPSDCQNFGLRSDVYARKHPKTKGASAGREWTEQETLLLLEALEV
YNDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENPVMS
TVAFLASVVDPRVASAAAKAALEEFSRAHEEYIDKISEMAIQTEKQEPIDAEKMEANSQN
QISLRLDDVNMDPGGAQMVEERVKIENAENLLAENRNGRVDDDDSFEQREGELSRAVIEQ
DLVEVAVPNAAAAALSSAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREKEALEQQRQQLLSERQTFHTEQLKQAEIKVRQQREQQGQPSLTMQLSGQSVPNRT
LPGGGTAQVMAPRPTGAPNGMYPSAQIDGIAPPVSTHN
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggggcgaaccccacatttcctggggtgaatccgtcctgcaccgtaatgtcc
ccgcacaagagaaaagacagcggtccgtccacacggttctgggagagtccggagactctg
gcgcagctggaggcggtgcggcaatggatcggaaagcattataagaagtacgtgctggtg
gatgctccttcatgtcagactctctcgatggtaaccatgcagcttatgcagtttcaagag
gatgtttttggcagagaagccagtcttgccctcaccaaactcccaacccagtgctttatg
gacttgcatccagggggaggactttgccacattcttgggatagcctataaattcaaggcg
gagcaagggtggcgaaggtttgacctacaaaatccatcaagaactgaaagaaatactgag
atgtttcacagtatagaaagggcactggtccagaacaactgcctttcatttccggtttta
tacctggaccctacggttgatcaagagctggctgaaagactccgtggcattatcacaaaa
caccagggttctctcaccgaggaccgagttcttgccagtcatcacatatatcctgcactt
gcagccccagaagaagacgaatggatgcgtgctgtaatgcagagagaaaagcatgtttta
gtacattggggcatgtaccctgacagctatgatagctggttgtcatctcttgaagttgaa
ggcgcaattgaagaaccacctctggatagaccctggaaggtccatgctgcatgggttctg
gacacagaccgtttcaacgaatggatgaatgaagaagattattgtgttgatgaaagaaat
gtccctgtgatcttccggcatcgaattcctcttcgtgatcaggactctcaatctactccc
cccaaaaaaagaaggcggtcaacctctccgccatcctccgaagttcgaaagaaagggaag
aaaggacgaaagcgtggacaacaggaggaagagccagaggaggatttgaccaaagacatg
gaggatccaacccctgtcccaaacatggaagaagtcattttacctaaaattgtgaacttg
aagaaggacagtgaaaacactcctgttaaagggggcatcatggctgatctagatgatcaa
gaggaggactatccaggaagggaggacgaggaaggcagagtggagatgtctcgctttcta
gaaggagaggagaacattacagaacaaacgcatcatgttataataccaagctatacatct
tggtttaataacaacagcatacattctattgagaaacgttcactaccagaattcttcaat
ggcaaaaacaaatctaaatcagcggaaatctacttggcatatcgcaactttatgattgac
acatatcgactgaatcctcaagaatatctaagctcgacctcctgtaggcgaaacctcact
ggagatgtctgtgcggtcatgagggtccatgcttttttggagcaatggggtttgctaaac
tatcaggttgatgcagaaagcagacccctccccatgggacctccccctactccacatttt
aatgtcctggctgacactcccactgggctggccccgctgcaacacaaacccttacaggtt
tctgcctcgcaacacatgctgtatttcccagacagagggagagagaagccttcagattgt
caaaactttggtttgcgatcagatgtttatgccagaaaacatcctaagactaaaggcgca
agcgctggtagggaatggactgaacaagagacacttttactactggaggctctagaggtg
tacaatgatgactggaataaagtttctgagcatgtcgggtcaaggacgcaggacgactgt
attcttcactttcttcgtttgccaatagaagacccatatcttgaagactcctctgcctct
cttggtcctcttgcataccagcctgtccctttcagccaatcggagaaccctgtcatgagc
actgtggccttcctcgcatcagtagtagaccctcgagtggcatctgcagccgccaaagca
gctcttgaggagttttctagagcacacgaggaatatatagacaaaatctctgaaatggcc
attcagacagagaaacaagaacccatagatgcagagaaaatggaagcaaattcccaaaac
cagatttctttacggttggatgatgtcaacatggatcctggtggagcccaaatggtggaa
gaaagagttaaaattgaaaatgctgaaaatttgcttgcagagaacagaaacggaagagta
gacgatgacgacagttttgagcagcgtgagggtgagctgagcagagcagtgattgagcag
gatctggtggaggtcgctgtacctaatgcagcagctgcagctctgtcgtctgctgccacc
aaggccaagcacttggcagctgtagaagagcgaaaaattaagtctctcgtggctttactt
gtggagacccagatgaaaaagttagaaatcaagctaaggcattttgaggagctggagacc
atcatggaccgagagaaggaggcattggagcagcaacggcagcagcttctgtctgagagg
cagacttttcacacggaacaactgaagcaagcggaaataaaagttcggcagcaaagggag
cagcaggggcagcccagtttaacaatgcagctctcaggccaatctgtgccaaaccggaca
ttaccaggaggagggacggcccaggtgatggcccctcgacccacaggcgccccgaatggc
atgtacccatctgcccagattgacggaatagcacctccagtatcgacccacaactaa
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