Eucyclogobius newberryi (tidewater goby): 140363088
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Entry
140363088 CDS
T10929
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eny01009
]
140363088 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140363088 (hdac6)
04131 Membrane trafficking [BR:
eny04131
]
140363088 (hdac6)
03036 Chromosome and associated proteins [BR:
eny03036
]
140363088 (hdac6)
Enzymes [BR:
eny01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140363088 (hdac6)
Protein phosphatases and associated proteins [BR:
eny01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140363088 (hdac6)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140363088 (hdac6)
Membrane trafficking [BR:
eny04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140363088 (hdac6)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
140363088 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
140363088
NCBI-ProteinID:
XP_072305518
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MSSKSDASDSGLKSVRRSPRFSPQGTNSSSVGDSTKGSADSKGEGKLQEAKRRGKMEREQ
REQEFNQKLQQLDLSNRSAAVDTGLVYSEEFTKHKNLWDTSHPECPERVQRIMEELKKQQ
LLSRCTRIQPRKATDKELLLIHLQSYVDLMHSTQTMTEAELRSLSEKYDSVYLHPDSFSV
AVLAVGSILQLVDRVLTSELRNGFALVRPPGHHAQRDQANGFCLFNNVAIAARYAQTRHR
VSRVLIVDWDVHHGQGIQYSFQDDPSVLYFSVHRFERGSFWPHLPESNSDFIGDTRGAGR
TINLPWNKTGMTDADYIAAFYHLLLPVAFEFQPQLVLVSAGFDPAEGDPKGEMCVSPQCF
QFLTRLLMSLAEGRIILALEGGYNLAQTAEGAAACVKALLGGACPPLSPPTAPSDSALES
ISQTISSLYPHWASLQVLEGCAFSGSEVLRESTNQGSLCCPSPTPSVSTKTGLVYDERMM
EHLNLWDRHHPEQPQRISKIYTRHQQLGLEQRCDRLEVRPATEEELLMCHSADHIARMKA
TSDLKPRDLFKLGEEFNSIFLNNQSYDCALMAAGGCFRAVEAVLTGQVCNSVAIVRPPGH
HAEKDFPCGFCLFNTAALAARFAQKISDNPSLRVLILDWDVHHGNGTQHMFEDDNSVLYV
SLHRYDNGSFFPSSLDAACDKVGVARGAGFNVNVAWSGGRMGDAEYIAAFHQVVMPIATE
FNPDLVLVSAGFDAARGDPLGGYNVTPEGYAHLTHLLLTLASGRLVMILEGGYNLTSISE
SMALCTSVLLGDSPPSILSPPPHHSAVTSINEVIRHHAPFWKSLRIQIPDLVRESLPSPK
HRGRRSSKGKGRTSDQNDKPPIPSTDLDQLTQGLAGLDITQTAAVGGARPKRRPSSGRLD
NQGQKLLEKSPSESQVVVAATDSEVAVSKNEPSPVKGGEPGVLPLKGADAEPSPVKGEEP
EAEAEGASGWSKTNLEVTCGVEMGGNTLFVVDPLPWCPHLDSVKPLPPAGVDIFKPCEDC
GSEVENWICLTCYKVCCGRYVNEHMVIHGVTAEHPVVLSYADLSVWCYVCESYVHNQVLF
EAKNAAHWAKFGEEIPPWT
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaagtcagatgcttctgattctggactgaagtccgtcagacggtccccacgt
ttttccccccagggaacaaacagcagttctgttggagactcaaccaaaggaagcgcggac
agcaaaggagaaggcaagctgcaagaggcgaaaagaagaggaaagatggagagagagcag
cgagaacaggagttcaaccagaagctacagcagctggacctgtcgaatcgatcagccgca
gtggacactggactagtatattctgaagagtttaccaaacataagaacctctgggacaca
agtcacccagaatgcccagagagagtgcagaggattatggaggagctgaaaaaacagcag
ctgcttagtcgctgcaccagaatccagccacgaaaggcaacagacaaggaactgctactc
attcacttgcagagctacgtggatttgatgcactcgacccaaacaatgactgaggctgaa
ctgagatctctgtcagaaaaatatgattcagtttatctccatccggactcgttttctgta
gcagttctggctgtgggctcgatcctgcagctcgtcgacagagtcctcacttcagaactc
aggaatggatttgctcttgtcagacctcctggacaccacgctcaaagagatcaggcgaat
ggtttctgcctgtttaataatgtggccattgcagctcgatacgctcagaccaggcataga
gtcagtagagtgctgattgtggactgggacgtgcaccatggacagggcatccagtacagc
ttccaggacgacccaagtgttctgtacttcagcgtccaccggtttgagcgcggatcattt
tggcctcatcttcccgagtcaaactcagattttataggggacacacgaggggccgggcga
accatcaacttaccgtggaacaagactggaatgactgatgcagattacattgctgctttc
tatcacctactgcttcctgttgccttcgagttccagcctcagttagtcctggtttcagcc
ggttttgaccctgcagagggagaccctaagggcgagatgtgcgtcagtcctcagtgcttc
cagtttctaacacgcctcctcatgagtttagccgaaggacgcatcattctagctttagag
ggtggttataacttggcacagacagcagagggcgctgcagcctgtgtgaaagccttactg
ggtggagcctgtcctcccctgtctccgcccactgctccctcagacagtgctctggagtcc
atttctcagaccatcagttccctgtatccacattgggcttctctccaggttctggagggg
tgtgccttctctggtagtgaagtgctgagggaatcgaccaatcagggaagcctgtgttgc
ccaagtcccaccccttcagtttccacaaagactggattggtttatgatgagaggatgatg
gagcacctcaacttgtgggacagacatcatccagagcagcctcagaggatctcgaagatc
tacacgcgacaccagcaactgggtctggagcagcgctgtgacagactcgaggtgcgaccg
gcgacagaggaggagcttctgatgtgccacagtgcggatcacattgctcgtatgaaggcc
acatctgatctgaaacccagagacttgttcaaactgggggaggagtttaactcgatcttc
ctgaataatcagagttatgattgtgctctgatggcagcggggggctgtttcagagctgtg
gaggccgtcctcactggacaggtgtgtaattctgtggcaatagtgcggccccctggacac
catgcagagaaggacttcccctgtggattctgcctctttaacacggcagcgcttgcggct
cgatttgctcagaaaatctcagacaatccatcactccgagtcttgattctggactgggac
gttcaccatggcaatgggacccaacacatgtttgaggatgacaacagtgtgttgtacgta
tcacttcatcgctacgacaacggcagcttcttcccctcctcattggacgctgcatgtgac
aaagtgggcgtggccagaggggcgggcttcaacgtgaacgtggcctggagcggtgggagg
atgggggatgcagaatacattgctgcatttcatcaagtcgtcatgccaatcgccaccgag
ttcaacccagatctggtcctggtctcggctgggtttgatgcggctcgtggagatccttta
gggggatacaatgtgactccagagggctacgctcacctcacacatctactgcttactctg
gcttcagggagactagtcatgatcctggagggaggctacaacttgacgtccatctctgag
tccatggccctctgtacctctgtgttactcggagactcgcccccatcaatcctgtccccg
ccccctcatcacagcgccgtcacatccatcaacgaagtcatcagacaccatgctccattc
tggaagtcactacggatacaaatcccagacctggtgcgtgagtcgttgccatccccaaag
catcgtgggagacgcagttctaaaggaaaaggcagaacgtctgatcagaacgacaaacct
ccaattccttccactgatttagaccagctcacgcagggattggccggtttagacatcact
cagactgctgcggtgggcggggccagacccaaacgccgtcccagctctggaagactggac
aatcagggacagaagttgttagagaaaagtccgtcagagtcacaggttgttgttgctgcc
acggactccgaggtggccgtttccaaaaacgagccctcacctgtaaaagggggagaaccg
ggcgttttacctctgaaaggggcggacgctgaaccctcacctgtgaaaggggaggagcct
gaggcagaggcagaaggagcctctggttggtccaagacaaacctagaggtgacatgtgga
gtagagatgggtggaaacaccttgtttgtggtggaccctcttccctggtgccctcatcta
gactcagtgaaaccgctgccccctgctggtgtagatatattcaaaccctgtgaggactgt
ggctctgaagtggagaactggatttgtctcacctgctacaaggtgtgctgtggccggtac
gtgaacgagcacatggtgatccacggagtcacagcagaacatcccgtggttctgagctac
gctgatctgtcagtgtggtgctacgtctgcgaatcctacgtccacaaccaggttttattt
gaagcaaagaatgcagctcattgggccaaatttggagaagaaatccctccctggacttaa
DBGET
integrated database retrieval system
