Eucyclogobius newberryi (tidewater goby): 140365185
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Entry
140365185 CDS
T10929
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04010
MAPK signaling pathway
eny04210
Apoptosis
eny04218
Cellular senescence
eny04620
Toll-like receptor signaling pathway
eny04621
NOD-like receptor signaling pathway
eny04622
RIG-I-like receptor signaling pathway
eny04623
Cytosolic DNA-sensing pathway
eny04625
C-type lectin receptor signaling pathway
eny04920
Adipocytokine signaling pathway
eny05132
Salmonella infection
eny05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140365185 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140365185 (nfkb1)
04218 Cellular senescence
140365185 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140365185 (nfkb1)
04621 NOD-like receptor signaling pathway
140365185 (nfkb1)
04622 RIG-I-like receptor signaling pathway
140365185 (nfkb1)
04623 Cytosolic DNA-sensing pathway
140365185 (nfkb1)
04625 C-type lectin receptor signaling pathway
140365185 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
140365185 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140365185 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
140365185 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eny03000
]
140365185 (nfkb1)
Transcription factors [BR:
eny03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
140365185 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
140365185
NCBI-ProteinID:
XP_072307557
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MTHATHGTLRVKMASDDPYLHPPSQMFDMITTDPNWHYQHFPGLTQNMTMRSVDGPYLQI
TEQPKQRGFRFRYGCEGPSHGGLPGASSEKNRKTYPSVKICNYQGPARVVVQLVTAAHNT
QLHAHSLVGKQCDKGICIAMLEPKDSTISFPNLGILHVTKKNVVKTLEERMVEALRMGYN
CGVHIHQELDAMQGEVRTPRELTDQQRSLISSEASVQSKEMDLSVVRLMFTAFLPDSDGG
FSRRLEPAVSDPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYE
EDDSGPTWEALGDFSPTDVHRQFAIVFKTPKYRDLTLQKPTSVFVQLKRKSDNETSEPKP
FTYHPQIIDKEEVQRKRQKTLPNFQDFSGPHGGAAGGGLYRGGGPGGVGGNGVFCAGYCQ
GFATFNYGASGAGGGFSGGYSAGLGSGAGAKHASRSSSADDGDPEDDSSSGADLRDTAQK
QDSRLGQSEEGTGGPLEDQTDDPLMDAACRQVEALFQFSISGNSAFLLAPQRHLLSAQDE
DGDTGLHLAILHSQQEALQSLTQVLTLFSTEELLNMRNHLYQTPLHLAVLTQHKEAVDAL
LLAGADPALTDRFGNTALHLATAQEVGDMTSHLLQRSEVRALMGVANAAGLCPLHVAVLS
NRLSSLRSLLQCGADVELQERTSGRTPLHLATEADNVSLAGCLLLEGHAKVDSYTFDGST
PLHVAAGRGSAKLTALLMAAGADPLSENLEPLFMSEEEEEEDEGYVPGTTPLNMAASAQV
LELLNSKEYEPKPPQKPLSPPQGDLCSLELSLKQEVCRALDTEGLWETLSHTLGLGILND
AFRLGPSPAKTLLDSYEVSGGTVKELFAALSSVGDCTALSVLQGAQQLTPTTDLPQASTE
SLVQDLTLDVRVDSGLCDSGVELSTV
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgccacacacggcactttacgagtaaagatggcttcagatgacccttacctc
caccctccctcccagatgttcgatatgatcacaacagacccaaactggcactaccaacat
ttcccaggcctgacccagaacatgactatgcgctcagtggacggtccatatctccaaatc
actgaacagccaaaacagcggggattcagattccgatacggctgtgagggcccatcacac
ggaggtctacctggggcctcgagcgagaagaacagaaaaacatacccctcagtcaagatc
tgtaactaccagggcccggcgcgtgtggtggtgcagctggtcacagccgctcacaatacc
cagctgcatgcgcacagccttgtgggtaagcagtgtgacaagggaatctgcatcgccatg
ctggaacctaaagactctactatcagttttccaaacttgggcatcctccatgtgaccaag
aagaacgtggtgaagactctggaggagcgcatggtggaggccctgaggatgggctacaac
tgtggggtccacatccaccaagagctggacgccatgcagggggaggtcaggacacccagg
gaacttacagaccagcagcgcagcctgatctcctctgaggccagtgtccagtccaaagag
atggatctgagcgtggtgaggctcatgttcacagccttcctgcccgacagtgatggaggc
ttctcccgcaggctggagccagcggtgtcagaccccatctacgacagcaaggctccaaat
gcttcaaacctgaagatcgtgcgtatggaccgcacagcaggatgtgtgacggggggagag
gaggtctacctgctctgtgacaaagtacagaaggatgacatccaggtgcgcttctacgaa
gaggacgattctgggccgacatgggaggctctgggggacttctcacccaccgacgtacac
cgacagtttgccatcgtgttcaaaactcccaagtatcgggacctgacgctgcagaagccc
acgtctgtgttcgtccaactcaagaggaagtccgacaacgagaccagcgagcccaagccc
ttcacctaccacccacagatcatagataaagaggaggtgcagaggaagaggcagaaaaca
ttaccaaacttccaggacttcagtggtcctcatggcggcgctgcaggaggcggcctctac
agaggaggaggacctggaggagtgggaggcaacggagtgttctgtgcaggatactgccag
ggcttcgccacctttaactacggggcttctggagctggaggtggcttctccggaggctac
tcggccggcctgggctctggagctggggccaaacacgcttctagaagttcctctgcagat
gatggcgatccagaagatgactcctcctcaggggctgatctacgagacacagcccagaaa
caagactccagactggggcagagtgaggagggcacggggggtcctctggaggatcagaca
gatgatcccttaatggacgcagcttgccgccaggtggaggcgctcttccagttctctatc
tcaggaaactcagcctttctcttggccccacagcgccacctactgtcagcacaagatgag
gatggggacacaggtctgcacttggccattctgcacagccagcaggaggcgctccagagt
ctgacccaggtcctgacacttttctctacagaagaactgctcaatatgaggaatcatctt
taccagactcctttgcacctggccgtcctcacgcagcacaaggaggctgtagatgctctt
ctattggccggcgctgatcccgccctcactgatcgcttcggtaacacagcacttcacctg
gcaacagcacaggaagtgggagatatgacgtcacacctgctgcagaggtcggaggtcagg
gcgctcatgggagtcgcaaatgcagcaggcctgtgcccgctccacgtggccgtcctgtct
aaccgtctgtcctcactgcggagcctgctgcagtgtggagccgacgtggagctgcaggag
aggaccagcggcaggacccctctgcacctggcaactgaggcagacaacgtgtccctggct
ggctgtctgctgctggagggacatgctaaggtggacagctacacgttcgatggctccacc
cccttgcacgtggcagcagggcggggctcagccaaactcaccgctctgctcatggctgca
ggagcagaccccctcagtgagaacctggagcctctgttcatgagcgaagaggaggaggag
gaggatgaaggctacgtcccaggaaccacccctctcaacatggccgccagtgcacaggtt
ttagagcttctcaacagtaaagagtacgaaccaaaaccacctcagaaacccctcagccct
cctcaaggggacttgtgcagcctggaactctctctgaagcaggaagtgtgccgtgctctg
gacactgaaggattgtgggaaacgctgtcccacactttaggtttgggcattttaaacgac
gccttcagactcggcccctctccagccaaaacgctactggacagttacgaggtctctggt
ggtacagtgaaggagttgtttgctgctctcagttcagtgggagactgcaccgctctgagt
gtcctgcagggggcgcagcagctcacccccaccacagacctgcctcaagcctccacagag
tcgctggtgcaggacctgacgctggacgtgcgagtggacagtggactctgtgacagtggt
gtggagctgtccaccgtctga
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integrated database retrieval system
