Eucyclogobius newberryi (tidewater goby): 140365233
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Entry
140365233 CDS
T10929
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140365233 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eny03021
]
140365233 (smarcc2)
03036 Chromosome and associated proteins [BR:
eny03036
]
140365233 (smarcc2)
Transcription machinery [BR:
eny03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140365233 (smarcc2)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140365233 (smarcc2)
PBAF complex
140365233 (smarcc2)
GBAF(ncBAF) complex
140365233 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
140365233
NCBI-ProteinID:
XP_072307622
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MAVRKKDGGPNVKHFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEQKLLGKLKDIIKRHQGSVTEEKTGSSHVVMA
IPGSLEDEEWVRPVMKRDKQVLLHWGYYPDSYDTWIAASEVEAAVEDAPSAEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGSPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNAKKGPTTPYTKSKRGQREEEPEDLSKDADEASPVAASEEGNPAKTN
NTKKDSDSTPVKGDNDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHHII
IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA
CRRNLAGDVCAIMRVHAFLEQWGLINYQVESESRPTPMGPPPTSHFHVLADTPSSLVPLQ
PKPAQTPTPIMSFPDKVKEKPTDLQNFGLRTDMYSKKTNSTKSKSAASTMRDWTEQETLL
LLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEEAATALGPLAFQPVPFSQ
AGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARASGR
QDPLYGLEGSGIAGTVVEEGDRTEESNTEESKTETPPAEEKKEAKPCDVTAQENKDGGNE
EAEKQTENGKKEEERREPEGERETEKTEAEGDGEKEKEGKESTEEAQRESESEGERKTKV
EREVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL
ETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHNQSTTPHGPA
PPTGATAQGPQPQTSSTPAPVPAPSPAPSASSGNAAETSAPPGAQTTTSSPCPPGHAPPS
HPSSGAAPAPHEHHGPHPGETPHPPAPVPPPQ
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtgaaacatttcgaggcttccgacacc
gtgtcccagttcgataatgtccgcgtgtggctgggcaagaattacaaaaagtacatccag
gccgaaccgcccacaaacaagtccctgtccagtctggtggtccagctgctgcagttccag
gaggaggtctttgggcgccacgtcagcaacccgcctctcaccaagctgcctatgaagtgt
ttcctggactttaagtctggaggagctctgtgccacatcctcgctgctgcctacaagttc
aagagcgaccaaggatggcgcaggtttgacttccaaaacccttcgagaatggaccgaaat
gtggagatgttcatgaccatcgagaagtccctggttcagaacaactgcctgtccagaccg
gtcatctacctgagctcggacatcgaacagaaactgctcgggaaactgaaggacatcatc
aaaaggcaccagggctcggtgacggaggaaaagacgggcagctctcacgtcgtcatggcg
atccccggcagcctcgaggacgaggaatgggtgcgtcccgtgatgaagagagacaaacag
gtgctgctgcactggggatattaccccgacagttacgacacgtggattgccgccagcgaa
gtggaggccgcagtggaagacgctcccagtgcagagaagcccagaaaggttcatgccaag
tggatcttagacctggaccagtacaacgagtggatgaacgaggaggactacgaggtggga
gaggggagtcccaaaaggaagaggatctcagccaaaaccctgacggacgaagtgaccact
ccggatgagcggagggacaagaagccgggcagcgccaaaaagaggaaacgctcgccctct
ccgtcgcccacgccgccgcctcaggagagcaagaagaagaacgccaagaaaggacccacg
actccgtacacaaagtccaagcgcggtcagagagaagaggaacccgaggacctgtccaag
gacgcagacgaggcgtcgccggtcgccgcctcggaagaaggaaatccagcaaagacgaat
aacaccaaaaaagactctgactcgacaccggtgaaaggagacaacgatgaacaagaagac
gagtccatggaaacgacaggaaaggaggaagaggaagggtctccgagcgtgaagggcgaa
ccggtcaaaggctcggatctgcacgaagacaacgtgacggagcaaacgcatcacatcatc
attcccagctacgctgcgtggttcgactacaacagcgttcatgcgattgagcgtcgagcg
ctgccggagtttttcaacgggaagaacaaatccaaaacaccggagatttacctggcgtat
aggaacttcatgatcgacacgtaccggctgaaccctcaggagtatctgacgtccacggcc
tgtcgccggaacctggccggagacgtgtgcgccatcatgagagtccacgccttcctggag
cagtggggtctcataaactaccaggtggagtccgagagccgcccgacgcccatgggacct
cccccgacctcgcacttccacgtcctggccgacacgccgtccagcctggtcccgctccag
cccaaaccagcccagactccaacgccaataatgtccttcccggataaagtgaaagaaaaa
ccgactgatctgcaaaactttgggctccgaactgacatgtacagcaagaagaccaactcc
acgaagagcaagagtgcagccagcacgatgagggactggacggaacaggaaacacttctg
ttactggagggtctggagatgtacaaagacgactggaacaaagtgtcggagcacgtgggc
agccggacgcaggatgagtgcatccttcacttcctgcggctgcccatcgaggacccgtac
ctggaggaggcggccacggcgctcgggcccctcgccttccagcccgtgcccttcagccag
gcagggaaccccgtcatgagcaccgtcgccttcctcgcctccgtggtcgacccgagagtg
gcctccgccgccgccaagtcggccctggaggagttctctcgtatgaaggaggaggttccg
gccgctctggtggaggctcacgttcgcagggtggaggaggcggcgcgggcgagcgggcgc
caggaccctctgtacgggctcgagggaagcggcatcgcaggcactgtcgtggaggaggga
gaccggacggaggagagcaacaccgaggaaagtaaaactgagactccgcccgctgaagaa
aagaaagaggcgaagccttgtgatgtcactgcgcaggaaaataaagacggcggaaacgag
gaggcagagaaacagacggagaacgggaagaaagaggaagaacggagagaacccgaggga
gagagggagacggagaagaccgaagccgagggcgacggagagaaggagaaagaggggaaa
gagtcgacggaggaggcgcagagggagtcggagagcgagggcgagaggaagaccaaagtg
gagcgagaggtcggcgagggaaacctggcgaccgccgccgcctccgctctggccgccgcc
gccgtcaaagccaagcacttggcggcggtggaggagaggaagatcaagtctctggtggct
ctgctggtggagacgcagatgaagaagctggagatcaaactgcggcacttcgaggaactg
gaaaccatcatggaccgcgagagagaagctttggagtaccagcgtcagcagcttttggcc
gaccgtcagtccttccacatggagcagctgaagtacgccgagatgagggcgcggcagcag
cacttccagcagatccagcaccagcagcacaaccagagcaccacgccccacggccccgcc
cccccgaccggggccacggcgcaggggccacagccgcagaccagctccacgccggctccg
gtgcccgcccccagcccggcgccctccgcctcctccgggaacgcggccgagaccagcgcg
ccccccggagcccaaaccaccaccagctccccctgcccccccggacacgccccgcccagc
caccccagctccggggccgcgcccgcgccgcatgagcaccacgggccccaccccggcgag
acgccgcacccgcccgccccggtcccgcccccgcagtga
DBGET
integrated database retrieval system
