Eucyclogobius newberryi (tidewater goby): 140365487
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Entry
140365487 CDS
T10929
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03083
Polycomb repressive complex
eny04980
Cobalamin transport and metabolism
eny05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140365487 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
140365487 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140365487 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eny01009
]
140365487 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eny03036
]
140365487 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
eny03029
]
140365487 (hcfc1a)
Protein phosphatases and associated proteins [BR:
eny01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140365487 (hcfc1a)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
140365487 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
140365487 (hcfc1a)
MLL-HCF complex
140365487 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
140365487 (hcfc1a)
Mitochondrial biogenesis [BR:
eny03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
140365487 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
140365487
NCBI-ProteinID:
XP_072308044
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MSAPGSVVTGTMVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
KLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPG
SSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDTLT
WNKPSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DSMCWETVLMDTLEDNIPRARAGHCAVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYLET
ERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPASPLVSATPSQSINS
PKSPIPAATAPAAQTLAQTAVLKVAAQQSTTGASVVTVRPSQPGKSPVTVTSLPPGVRMV
VPAQAAQGSPIGSSPQMSGMAALAAAAAATQKIPPPSGATMLNMPAGTTILKTVAVSPGT
TAVKVASPMMVSNPATRMLKTAAAQVGTATAGSPTTNRPIITVHKSGAVTVAQQAQVVTT
VVGGVTKTITLVKSPLTMGGSGTLFSNLGKMMSVVQTKPVQTSAVTGQASTNPLAQILQT
KGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTIIKTIP
MSAIMSQAGATGVTSSSSLKSPFTILTTKVMTTGTPGKIITAVPKLATAAGQQGLTQVVL
KGAHGQPGTILRTVPMSTMGGVRLVTPVTMSSVKPTVTTLVVKGTTGVTTLGTVTGTVST
SLSGGSVESSTASLVTPITTLGTIAALSNQVINPTAITVSAPQTSLTSTSTLPSTITVQN
QPTQVTLITTPSGVEAQPVQDLPVSILASPTSDQPSSTEANASGDASGTVTLVCSNPPCE
THETGTTNTATTASANMSAPRVCSNPPCETHETGTTNTTTTASANMGGVQKVCSNPPCET
HVTSTTNSTTQASSNMSAGPTGTVQRVCSNPPCETHETGTTNTPSTAASNMGADQTSTAS
GLSQRVCSNPPCETHETGTTNTPSTATSNMGADQTSTASGLSQRVCSNPPRETHETGTTN
TPSTATSNMGADQTSTASGLSQRVCSNPPCETHETGTTNTATTATCSMETADGTAQQTEE
GTEVATSTEEASSPAATSLVSTTQGRAITNVTQSTPAPGPAVPSISSITEGANTASSSTE
EPMQTEATSSAVASAEEGDAVNAMETQGEAGTATALNLPSELMSEGQGAASLMVTGLSDE
ELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGGSAGESQQTTNIPIMLTQQE
LAALVQQQQQLQEAHAAAQQSAVDTSMPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVA
SLLPHTAADTLAPSSTFPGSVSVSSPAKLQAAATLTEVANGLEKQAPQPAPVKPVVKKEN
QWFDVGIVKVTNMVVTHYYVPSDDSLGDDDSGILPDYGQMKKMELQPGTAYKFRVAGINA
CGRGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQS
SQTTEAKASTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYG
PATQVRWLQESGKDVSAAKPAPKRPGTSPDGKATGPKKARTDQ
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgtggtgactgggaccatggtcctgcagccgcgctggaagcga
gtcctcgggtggtctggtcctgtcccgcggcccagacacggacatcgagctgtggccatc
aaagaacttatggttgtgtttggcggcggaaacgagggcatagtggatgaactacatgtc
tacaacacagctaccaatcaatggttcataccagcagttcgtggtgacatcccccctggt
tgtgctgcatatggttttgtctgtgatggcactagattactggtgtttggtggtatggtg
gagtatgggaagtacagcaatgatctttatgaactgcaggccagcagatgggagtggaaa
aagttaaaagctaaaaacccgaagaatggcccccctccctgtcctaggcttgggcacagt
ttttctcttgtgggtaacaagtgttacctttttgggggtcttgccaatgacagtgaggat
ccaaaaaacaatattcccaggtatctaaatgatttgtacacactggaacttcgccctggt
tcaagtgtggttggatgggatattccgataacatacggagttctgcctcctccccgtgag
agtcacacagctgttgtatacacagaaaagactagcagaaaatcacgtttgataatctat
ggaggaatgagtggttgccgtctgggagatctttggacacttgatattgacacactgaca
tggaataaaccgtccgttaatggcacagcaccactgcccagaagtcttcactcagcaact
accataacaaacaagatgtacgtttttggaggatgggttcctttggtaatggatgatgtt
aaagtagcaacacatgaaaaagagtggaagtgcaccaacactcttgcttgtctcaatctt
gattccatgtgttgggaaacggtcttgatggacactcttgaggataacatccccagggct
cgtgctggccattgtgctgtttctatcaattctcgtctttatgtttggagtggacgtgat
ggttatcgtaaagcatggaacaaccaagtgtgttgtaaagacttgtggtaccttgaaact
gaacggccacatgctcctgccagagttcagttggtccgtgccaacacaaactcactggag
gtgagctggggagcagtctctaccgctgatacatacttgttgcagctacaaaagtatgac
atccctgccactccagcttctcctctagtgagtgcaacaccatcccaatctataaactct
ccaaagagtccaattccagcagcaacagcccctgcagctcaaacccttgcacaaactgca
gttttaaaagttgcagctcaacagtctaccacaggagcgtcagtagtcacagttcgcccc
agccagcccgggaagtctcctgtgacagtaacatctcttcctccaggtgtaagaatggtt
gttcctgcccaggctgctcaaggatctccgattggaagtagccctcaaatgagtggcatg
gcagcattagcagcagctgcagctgctactcaaaaaattcctcctccttcaggcgctact
atgctaaacatgccagctggtactaccatactgaagactgtggcagtttcccctggtact
actgctgtcaaagttgcctccccaatgatggtgagcaacccagccactcgaatgcttaag
actgctgctgcccaggttggcacagcaactgctggctctcctaccactaacagaccgatt
attactgtccacaagtcaggcgctgttacagttgctcagcaggctcaggtagtcaccact
gttgttggtggagttactaagactatcaccttggtcaagagccctcttaccatgggtggc
agtggaactctgttctccaatcttggcaagatgatgtctgtggtgcaaaccaagccagtg
cagacatcagctgtcacaggccaggcctccactaaccctctcgcacagatcttacagaca
aagggtccccttccagccggaactatcctgaaacttgtgacgtcagcagatggcaagccg
actactatcatcaccacctcgcaggctggaggcacaggaaacaagcctacaatcctcaac
atcagtggtgtctcacctaccaccactaaacaaggcaccaccattattaagaccatccct
atgtcagccatcatgagtcaggctggagccacaggtgtgaccagtagttcaagtttgaaa
tcaccttttacaatccttacaacaaaggtgatgaccactgggacgcctggtaaaatcatt
actgctgtaccaaaattggcaactgcagctggccaacaaggactgacacaggtggtgctg
aagggtgcccatgggcaaccaggaactattctgcgtactgtgcccatgagcacaatgggt
ggtgttcgccttgttactccagtgactatgtcatcagttaaacccactgtcacaactctg
gttgttaaggggaccacaggtgtcactactcttggcacggtcactggtacggtctctacc
agtctgtctggaggctctgtagagtcttctactgcatcgttggttacccccatcaccaca
ctgggaaccatagccgccctgtccaatcaggtcatcaatccaactgccattactgtgtca
gcaccacagaccagcctgacctcaacctccactctgccctctaccattacagtgcagaac
cagccgacgcaagtaactcttattactactccaagtggagttgaggctcagcctgttcag
gacctccctgtatccatcctggcctctccaacatcagatcaacccagttctacagaagca
aatgcatctggagatgcctctgggacagtaactttggtgtgttctaacccgccttgcgag
acgcatgaaacaggaaccaccaatactgccacaacagcttctgcaaatatgtcagcacca
cgcgtatgctccaacccaccatgtgaaactcatgaaactggcaccacaaacacaacaacc
acagcctcagccaacatgggaggagtccagaaagtgtgctcaaaccctccttgtgaaact
catgtgaccagcaccacaaactccaccacccaggcctcatccaatatgagcgctggccca
acaggaactgttcaaagggtgtgctccaatccaccctgtgaaacgcacgagactgggacc
accaacaccccgtccacagccgcctccaatatgggagctgaccagacaagtacggcatcg
ggcctgtcccagagggtgtgctccaatccaccctgtgaaacgcacgagactgggaccacc
aacaccccgtccacagccacctccaatatgggagctgaccagacaagtacggcatcgggc
ctgtcccagagggtgtgctccaatccaccccgtgaaacgcacgagactgggaccaccaac
accccgtccacagccacctccaatatgggagctgaccagacaagtacggcatcgggcctg
tcccagagggtgtgctccaatccaccctgtgaaacgcacgagactgggaccaccaacacc
gccaccactgctacttgcagtatggagacagctgacggcacagcccaacaaaccgaagaa
ggaacagaagttgccaccagcacagaggaggcatcctctccagcagccactagcctcgtg
agcaccacccagggcagggcaattacaaatgtaacccagtctaccccagccccaggacct
gccgtcccatcgatctcttctatcactgaaggtgcaaacacagcttctagctctactgag
gaacccatgcaaactgaagcaacgtcatctgccgttgcctctgctgaggaaggcgatgcg
gtcaatgccatggagacacaaggagaggcgggcacagccacggctctgaaccttccttca
gagctgatgtctgagggccagggagcggcatcactcatggtgactggattatccgacgag
gagctggccgttaccgctgcagctgaagctgctgctcaggcagcagccactgaagaagct
caagcactcgccattcaggctgtcctccaggctgctcaacaggcagtcatgaatgagggg
ggctctgcaggagagagccagcaaaccaccaatatcccaataatgctgacacagcaggag
ctggcagcactggttcagcagcaacagcagctccaggaggctcatgctgctgctcagcag
agtgctgtggacacaagtatgcccactgaaggtctagcccccgcagacagcctcaatgat
ccttcagtcgaaagcaatggacacaatgaaatggcagctgccgtcacaagtgctgtagca
tctttgctcccacatactgccgcagatactttagccccatcaagcacatttccaggctct
gtttcagtatctagtcctgccaagctgcaagcagcagcaaccctaacagaggtagccaat
gggttagagaaacaagctcctcagccagccccagtgaagcctgttgtgaagaaggagaat
cagtggtttgatgttggaatagtaaaagtgacaaatatggttgtcacccactactatgtg
ccatcagatgactctcttggagatgatgactctggtatcctgccagattacggccaaatg
aagaaaatggagctccagcctggaacggcatacaaatttagagtagcaggaataaatgct
tgtggccgtggatctttctctgagatctctgcattcaagacctgcctacctggcttccca
ggagcaccttgtgccatcaaaatcagcaagagccctgatggagcccacctaacctgggag
ccaccttctgtcacttctggaaagattattgaatattcagtctacctggccattcagagc
agccagacgactgaggccaaagcttccaccccagcccaattggccttcatgcgcgtttac
tgtgggcccagtccctcgtgtttggtgcagtcctccagcctctccaacgctcacatcgac
tacacaaccaagccagccatcatcttccgcatcgctgcccgcaatgagaagggctacgga
cctgctacccaagtccgatggttacaagaatctggcaaagatgtttcagcagctaaacca
gcgcctaaaagaccaggaacgtctcctgatggcaaggctactggtccaaagaaagctagg
acggatcagtga
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integrated database retrieval system
