Eucyclogobius newberryi (tidewater goby): 140366048
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Entry
140366048 CDS
T10929
Symbol
col7a1
Name
(RefSeq) uncharacterized protein col7a1
KO
K16628
collagen type VII alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140366048 (col7a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
DUF4992
Motif
Other DBs
NCBI-GeneID:
140366048
NCBI-ProteinID:
XP_072308806
LinkDB
All DBs
Position
Unknown
AA seq
2920 aa
AA seq
DB search
MWGLFTAALLLLFGVEQSEAQGTCNNIQAADIVFLVDGSSSIGRANFLQVKGFMAGIVKP
FVSSVGPSGVRFGAVQYSDTSRVEFTFTSYLNGTELVNAVQNLNYKGGNTRTGAGLKFVS
DNFFNPASNRDVPKITILITDGKSQDNVQDPAQKLRSQGVHVFAVGIKSADRNELAQISS
EPSADFTSFVGEFKLLSTLLPIVGPKVCSKAGGLYASDEAFSGPANLQFTVQSLDSLRFK
WNAASGPVSGYLVQYAPLSGLGQPINAELRQDTVPASQRSFTARELRSGTDYLVTVIAQY
PNSVGESTSAKQRTRSVPGVSSLRLIEAGFFSLSVGWEQPSAPVQGYRLTYGPRGQPAAE
LLEQSVSADSTSLTLESLQPGTEYVISLYPLVPRNSASPSVLNANTLSLEAVQQLSVQTE
SEGSVRVQWGGVTGAQAYRLVWGPFTGQTVETAEVAADTNYYVLSRLEADIEYIITIIPL
YQSGTEGPVATARFKIERQEQQQLRALTTGPSTIRLTWRFIQSSRGYRLEWRAGEGGRVQ
SLSFPRGTTNFDLTGLQPNTEYIITLYTLFEGREEATPVSTTAREEQPVGRVSNLRLVES
LGSTVRLGWTGVTGATQYRIIIQNTEDGSDEFRTIPGNQTTLDLRDLIVGVSYAVSVTAM
VGTNEGDSVTVYIKPEQLVGRVSNLRVTNVSSRRIRISWTGVSGATGYRVTWRQGNGPEQ
TRTVGVESTSFTIDGLSPDSAVVIGVAALTGDRAGDVVTLSSRTNPNAGSVSGLRITDVT
AQRIRITWAPSSRATGYKITWRRDDGFEASRTVSTNVSSFTIDGLQSDSAYNVLVSALSG
SREGNPATLTVRTESDQSVVGTVTSLQVQEGRGEVVRVTWVGVQGATSYRVSWRRIDGGE
ERSQEVSGDQTAVDLDQLDPGVQYEVQVMALVQNREGSPVSVRVTTPGTSTLPTTRLQVS
EVTQNSVRLAWASVPGVTGYILRWRDETDSGAGLSITLPSSSNSYLVTGLRLGRRYRFTL
QPTFESGLGAETYVDEHPVCAGGRLDVVFLVPASTDRLTLARPMRALLTSAARTLNTFGE
RDSQMGVVVYGYRPKMWFLLNRHSRSDSLLQEIQSTPFDEGPGNNMGQAVNFTTQYLLTE
SAGRRVRVPGTVVIIADRRSEDNLTLAANYLRATGVTVLALGVGQADTEELRRAVTDSSP
QNILYAADASQLDSLHTELSDLLCGIARIPEVFPGPNQCTINCPRGEKGDRGEKGDRGRE
GVDGRKGETGRDGFPGRDGLRGPEGRPGTPGSSVPFDPSAGLKGEKGDRGFPGIDGSSGL
PGRPGSPGTAGVPGSQGLPGVRGNAGESGLPGSVGSKGDRGEKGEPVSGGGLPGRKGEPG
LPGIPGTPGRPGADGAKGASASPGPPGQDGRPGLAGTPGLSIKGDKGSSGERGPPGVGSG
SAIKGDKGSSGSPGLPGSAGAKGQAGSSGSKGDKGEAGAGLPGPPGRQGEPGDRGPRGPP
GEIGSKGDRGQPGEPGSEGDRGERGLTGETGERGPSGKPGLAGTQGLRGLPGPSGQPGEK
GNDGTPGEPGRSIQGLPGKRGEQGIRGSSGLDGSKGEQGEPGQKGESGSGGAGGGGTKGE
PGARGPPGLSGKPGEKGEPGDAGEKGDSGKPGIPGKAGLPGKLGERGEKGDDGIPGESGL
PGKNGERGLRGLAGQPGRPGEKGDAGEPGELGRNGSPGAAGTRGEKGEQGPSGPVGPPGK
VADILGTLRGERGEKGDAGDPGEHGGKGLKGEVGPPGPAGLRGLEGQRGLPGARGDAGER
GSPGDKGDRGPSGLDGRPGLDGKPGGPGPPGLRGDPGKQGDPGRDGLPGLRGEQGPQGPA
GPSGVAGTPGKAGEDGKPGLPGKAGEDGEPGEDGRKGDKGEAGAAGRDGRDGLKGDRGLA
GASGPAGPPGPAGLPGAVGPPGQVVYVKGLEAAPIPGPQGPPGTPGVPGIPGAAGQRGER
GPSGPKGDAGDPGEDGAPGKPGTAVDLQKALAGFGILVSDLKVVVDKKDVQASRPEVKPQ
KGDKGDRGESGSRGPAGEDGSRGSAGDRGPKGEQGERGPAGATGPPGRAIGERGPEGPTG
PAGEPGKPGIPGVPGRAGELGEAGRHGEKGDKGDKGDKGDSGKVGFTGPAGPPGQKGASA
ESVVAGAPGVRGPPGVLGQKGEPGASGLPGPKGDRGFAGPQGNKGDRGEAGERGRDGSQG
IPGEPGKPGQDGKPGLPGFPGVLGRPGIPGETGIRGPTGPMGPNGPPGAPGVKGTQGEPG
VGVQGSPGAQGSTGLPGPPGPPGAVGPQGPPGLSGQVGEAGKPGVPGRDGVPGKEGIPGL
PGKQGIAGPPGLAGLKGEQGDSGPPGKAVAGPMGPKGERGPAGQSLGGPRGDAGSPGEKG
DRGDKGSPGTKGERGVVGEPGEAGEDGAQGSSGPKGDKGEKGIGLAGPAGRSGPPGLKGD
PGLPGPAGPPGLQGKSGDNGLPGVRGENGAPGPPGPPGERGLQGFPGRAGNPGGPGPAGP
TGESGALGTNGSKGDKGEVGLGTPGLRGERGDPGTRGEDGRPGVDGERGTSGAPGVRGTR
GDKGDIGPQGDKGEKGDTVLVGGPQGENGSKGEQGDRGPKGIQGEKGLKGQEGPAGQQGL
RGEPGEGGSPGFPGARGPGGQKGEAGQPGVPGEMGLPGKDGFAGRKGDKGELGITGLRGI
KGDRGSKGVCGGEGPKGDKGDGGIPGRSGLPGRKGEQGDVGAAGALGSPGKEGLVGPKGD
RGFDGVSGPKGAQGEKGERGPPGVPGPPGPRGGDGPPGLTGIQGLAGTTGPEGLQGQKGE
RGPIGPAMVGPRGIPGIPGERGETGELGPDGAKGDRGEPGMTEDEILEYVRTEMNQHCAC
GGEFVSGTFHWDRRCMTHTTPHMLLMRTSQRSNQANSQNI
NT seq
8763 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcctgttcacagccgcacttctgctcctgtttggtgtggagcagtctgaggct
cagggaacgtgcaataatatccaagcggcagatatcgtatttttagtggatggctcgtca
agtatcggccgagcaaactttctgcaagtgaaaggatttatggccgggattgttaaaccc
ttcgtcagttcagtcggcccttcgggggttcggtttggagccgtgcaatatagtgacact
tcaagggttgagttcacctttacctcatacctgaacggcacggagctggtcaacgctgtg
cagaatctcaattataaaggaggaaatacacgaacgggggcggggctaaagtttgtgtct
gataacttttttaaccctgcatccaaccgggacgttcccaagataacaatcctgatcact
gacggaaagtcccaggacaatgttcaagacccagctcaaaaactgaggagtcaaggcgtg
cacgtctttgcagttggtatcaaaagtgcggacagaaacgaactggcccagatctcgtcg
gagcccagcgcggacttcacctctttcgtgggggagttcaaattgctgagcaccctcctc
cccatcgtcggccccaaagtctgttccaaagcaggagggctctacgccagtgatgaggcg
ttttcaggcccggccaacttacagttcacggtgcagagcttggactcgctgaggttcaag
tggaacgccgcctctggtccggtcagcgggtacttggtccagtacgcgcctctgtcagga
ctcgggcagcccatcaacgcggaactccgacaggacacggtcccggcctctcagcggtcc
ttcaccgcgcgagagctccggtcgggcacagattatctggtcactgtcatcgctcagtat
cccaacagtgtgggagagtccacctccgctaaacagaggacaaggtccgtaccaggagtg
tccagcctgcgtctgatcgaggcaggcttcttctctctgtctgtgggctgggagcaaccc
tctgctccagtacaaggatacagactcacctacggcccccggggccagccggctgcagag
ctcctggagcagtcggtgtctgcagacagcacctccctcacgttagagtctcttcagcct
gggacagagtacgtcatcagcctttaccctctggtcccacggaactctgcgtcgccctct
gtgctcaacgccaacacactgtctctggaggcggtgcagcagctgtcggtgcagactgag
tccgagggcagtgtgagggtgcagtggggcggagtcactggagctcaggcctatcgactc
gtctggggcccattcacaggtcagactgtggagacggcggaggtggcggccgacacaaac
tactatgtcctgtcccgactggaggcggacatagagtacatcatcaccatcatccctctg
taccagagcggcaccgaggggcctgtggccactgcgcgcttcaagatagagcgccaggag
cagcagcagctcagagccctcaccacaggcccctccaccatcagactcacctggaggttc
atccagtcgtccagaggatacagactggagtggagggccggagaaggaggccgtgtgcag
agcctgtcttttcccagaggcaccacaaactttgacctgacggggctccagccgaacaca
gagtacatcatcactctgtacactctgtttgagggccgagaggaggccacgccggtgtcc
actacagccagagaggagcagcctgtgggtcgcgtgtcaaacctgcgcttggtggagtct
ctgggcagcaccgtgagactgggctggaccggggtcaccggggcaacgcagtacaggatc
atcatccagaatacagaggatggcagtgatgaattccgcactattcctggaaaccagacg
acccttgacctgcgtgacctcattgtgggcgtgtcttatgcggtcagcgtcacagcgatg
gtggggaccaatgagggagattcagtgactgtgtacatcaaaccagagcaactggtgggt
cgagtgtccaacctgagagtgaccaacgtcagcagcaggaggatccggatcagctggact
ggagtcagtggagccacaggctacagagtcacctggagacagggcaatggtccggagcag
actcgtacggtgggcgtagagagcacctccttcaccatagatgggctgtcccctgacagt
gccgtggtgataggcgtggccgctctgaccggggaccgggccggggatgtggtcactctg
tcgtctcggaccaacccaaacgcaggctcagtgtccgggctgcggatcactgacgtgact
gcacagaggatcaggatcacctgggccccgtcctccagagccacgggctacaagatcaca
tggaggagagacgatggttttgaggcttcgcgtacagtgtcgacaaacgtctcctccttc
accattgatgggctccagtcggactcggcctacaacgtgttagtgtctgctctgagcggc
tccagagaagggaatcctgccacgctcaccgtcaggacagagtcagatcagtccgtggtg
gggacagtgacctcgcttcaggttcaggagggccgaggagaagtggtccgggtcacatgg
gtcggagtccagggagcaacgtcctacagagtgtcctggaggagaattgacgggggagag
gagcgcagccaggaggtgagcggggaccagactgcagtggatctggaccagctggaccct
ggagttcagtatgaggtccaggtcatggctctggtccagaacagagaggggagtccagtg
tccgtcagagtcaccacacccggcacctccactctgcccaccaccaggctccaggtctct
gaagtgacccagaactcggtgcgtttggcctgggcttctgttcccggggttactgggtat
attctacgatggagggatgagacggactcaggagcaggtctgtccatcacgctcccgtct
tcttcaaactcttatctcgtcacgggactgcgtttgggacggaggtatcgcttcacgctt
cagccgacttttgagagcggactgggggccgagacctatgtggatgaacacccagtgtgc
gcgggcgggcggctggatgtggtcttcctggtgcccgcgtccacagacagactgaccctg
gccagacccatgagggctctgctcaccagcgcagctcgcactctcaacacttttggggag
agagattcacagatgggagttgtagtttatggttacagacctaaaatgtggttcctgctg
aaccgccacagcagatctgactctctgctccaggagatccagtctacgcccttcgatgag
ggcccaggaaataacatgggtcaggcagtgaacttcactactcagtacctcctgaccgag
tcggccggtcgcagggttcgagttcctgggactgtggtgatcattgcggaccgaagatct
gaagacaatctcaccctggccgctaactacctccgagccacaggggtgaccgtgttggcg
ttgggcgtgggccaggccgacacagaggagctgcggcgagctgtgaccgacagcagccct
cagaacatcctgtacgccgctgacgcttcacaactggactcactccacaccgaactgtcc
gacctgctctgtggcatcgctcgcatacctgaagtgtttcctggcccaaatcagtgcacg
atcaactgtccaagaggtgaaaagggagaccgtggagagaagggtgacagaggcagagaa
ggtgtggatggacgcaaaggggagacgggtcgcgatggttttcccgggagagacgggcta
agaggtcctgagggtcgccccggtacgcctggctccagcgtgccctttgacccctcggcg
ggtctgaagggggagaaaggggacaggggatttcctggaatcgatggaagctcagggtta
ccagggcgaccaggttctccgggaaccgcaggcgttccaggttcacagggtcttccaggc
gtcagagggaacgcaggtgaatctggtttgcctggatcagtcgggtcaaagggagacagg
ggtgaaaagggagaaccagtgtctggaggaggtttgcccggaaggaaaggagaaccaggc
ctcccaggaataccaggaactccaggacgtccaggagctgacggggccaaaggagcgtct
gcatctccggggcctccgggacaggacggtcgccccgggttagcaggcacacccgggctc
tccattaagggggataagggcagctccggagaacggggacctccaggagtgggcagtggt
tcggccatcaagggcgacaagggctcctcaggcagtccaggacttccaggctctgcgggc
gctaaggggcaggcgggctcatcaggctccaagggtgacaagggcgaggcaggagctgga
ctgcccggaccgccaggcagacaaggagagccgggggacagaggtcctcgcggtcctcca
ggggagattggcagcaagggagaccgaggacaacctggagagccgggttctgagggggac
aggggggagcgaggactaactggagagactggtgagagaggcccctcggggaaaccaggc
ctggctggaacacaggggttaagaggtttaccaggacccagtggacaacccggggaaaaa
ggaaatgatggtacaccaggggagccaggccgaagcattcaaggtttgccaggaaagaga
ggagagcaggggattcgcgggtcgtctggtctggatgggtcaaaaggagaacaaggagaa
ccaggacagaaaggagagtctggatctggaggagcaggtggtggaggaactaaaggagaa
ccaggagcgcggggacctcctggactcagtggaaaacctggagaaaagggtgaaccgggt
gatgctggagagaaaggcgacagcggcaaaccaggcattccgggaaaagcgggacttcca
gggaaactaggggaaaggggagaaaagggcgacgatggcatccctggggagtctggcctg
cctgggaaaaatggagagagaggactaaggggtctcgccggacagccaggacgtccggga
gagaagggcgatgctggagagccaggagagctgggtcgaaatggcagtcctggagccgcg
gggaccagaggagagaagggagagcagggaccatcaggacctgtcggaccaccaggaaaa
gtggccgacatcctgggcactctgagaggagaacggggagagaagggtgatgctggagac
cctggggagcacggaggcaaaggcttgaaaggagaagttggacccccggggcctgctggt
ctaaggggacttgaaggacagcgaggccttcctggagcaagaggtgacgcaggagagaga
ggttccccaggagacaagggagacagaggtccttctgggctggatggtcgtcctggtctg
gatggtaaaccaggaggcccaggacctccaggacttaggggtgatccaggcaaacaagga
gatccgggcagagatggtttaccaggactacgaggggagcagggaccccaaggccccgct
ggtccttcaggtgtggccgggacacctggtaaagcgggtgaagatggaaaaccaggtctt
ccaggaaaagcgggtgaagacggcgagcctggagaagacggaagaaagggcgacaaagga
gaagctggagcggctggacgagatggccgagatggactgaaaggagacagaggcctggcc
ggagcctcgggccctgcaggacctccaggaccagcaggactccctggagctgtgggtcct
cctggacaggttgtctatgtgaaaggactggaagctgcgcccatcccaggtccacagggg
cccccaggaacaccaggggttccagggatcccaggagcagcggggcagcgcggagagaga
ggcccctccggccccaaaggtgacgctggagacccgggagaggacggagcgccaggcaaa
ccagggactgcagtggatttacagaaagctctggcaggctttgggatcctggtgtccgat
ctgaaggtggtggtggacaagaaggatgtccaggcctctcgtcctgaagtcaaacctcag
aaaggagacaagggcgacagaggagagtccggatcaagggggccggccggggaagatggc
tctcgaggctcagctggagacagaggacctaaaggagagcagggagagcgagggcctgcc
ggagccactggacctccaggcagagccatcggggagcgaggaccagagggacccacggga
cctgccggagagccaggcaaacccggcattcctggtgtcccgggacgagcaggcgaactg
ggggaggcgggaagacatggagaaaagggggacaaaggcgataaaggggacaaaggagac
tcgggcaaagtcgggtttacgggaccagctggccctccaggtcagaagggcgcttctgct
gagtcagtggtggcaggcgctccaggggtcagaggtcctcccggagtcttgggacagaag
ggagagccgggtgcatcaggactccctggacccaaaggagaccggggttttgctggacct
caaggtaacaaaggagacagaggcgaggcaggagagagaggacgtgatggttcacagggt
atcccaggagagccaggtaaacctggccaggacggtaaaccgggcctgcctgggttccct
ggagtgctgggcagaccgggaatccccggagagacaggcatcagagggccgactggtccc
atgggtcccaacggccccccaggagctccaggtgtgaaggggactcagggagagccaggt
gttggtgtacagggttccccgggcgcccaggggagcaccggtctgccgggacccccaggc
cctcccggagcggtgggtccacaggggcccccaggcctgtccgggcaggtgggtgaagct
ggtaaaccaggggtcccaggtcgagatggggtcccaggtaaagaaggcatcccaggactc
cctggaaaacagggcatcgctggacccccggggctcgctggattgaagggagagcaggga
gacagcggccctccagggaaggctgtggctggacccatgggacccaagggagaacggggt
cctgctggtcagtctctgggcggtccaagaggggacgcaggctcacctggagaaaagggc
gacagaggagacaaaggatctcccggcactaaaggagaacgaggcgtggttggagaaccc
ggagaggctggggaagatggagcacaaggttcttcggggcccaaaggagacaagggagag
aaaggcataggactagctggtccagctggacgcagtggacctccaggtttaaaaggcgat
ccaggtcttccaggtccagctggtcctccaggtcttcagggaaagtctggagacaacggc
cttccaggagtcagaggagagaacggagctccaggacccccggggcccccaggagaacgg
ggtcttcaaggttttccaggtcgagcaggaaacccaggaggtccaggtcctgctggtcct
actggagaatctggtgccctgggtacaaatgggtccaaaggagacaaaggggaggtggga
ctgggaaccccaggcctgagaggagagagaggagacccaggaacaagaggtgaagacggt
cgccctggtgtcgacggggagagaggaacatcaggtgctccaggcgtccgtggcactcga
ggtgacaagggggacatcggaccacaaggtgacaaaggagaaaagggtgacactgtgctg
gtgggaggacctcagggagaaaacggcagcaaaggagaacaaggggaccgaggaccaaag
gggatccagggagaaaaggggctgaagggtcaagagggtcccgcaggacaacagggtcta
agaggagagccaggagaaggcggatcacctggtttccctggagctcgaggccccggcggt
cagaagggcgaagcgggccagccgggagtaccgggagagatgggtctaccaggaaaagat
ggatttgccggacgtaaaggcgacaagggcgagcttggcatcaccgggctacgaggcatc
aagggagacagaggctccaaaggagtctgcggaggagagggacccaaaggagacaaggga
gacggcggtatccctggccgctcggggcttccaggaagaaagggagaacagggggatgtc
ggggctgcgggtgctctcggcagtccagggaaagagggacttgtcggacccaagggcgac
cgcggcttcgacggagtgtccggacccaaaggagctcaaggagagaaaggggaacggggc
ccaccaggagtccccggccctccaggacccagaggaggagacgggcccccaggtctgacc
ggaatccagggacttgctggaactactggaccagagggacttcaaggacagaaaggggag
agaggtcccataggtcctgccatggtcggaccacgaggaatcccaggaatcccaggggaa
cgtggcgagacaggggagctggggccagatggagcgaagggagacagaggagagccaggc
atgacggaggatgagatcctagagtacgtccgcactgagatgaaccagcactgtgcgtgt
ggaggtgagtttgtctccggcacatttcactgggacagacgttgcatgactcacactact
ccacatatgcttcttatgcgaacgagccagaggagcaatcaggctaatagtcagaacatt
tga
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integrated database retrieval system
