Eucyclogobius newberryi (tidewater goby): 140366717
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Entry
140366717 CDS
T10929
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140366717 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140366717 (ddx6)
03036 Chromosome and associated proteins [BR:
eny03036
]
140366717 (ddx6)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140366717 (ddx6)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140366717 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
140366717 (ddx6)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Gene silencing
piRNA pathway
140366717 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
SNF2-rel_dom
NA-iREase2
AAA_22
Motif
Other DBs
NCBI-GeneID:
140366717
NCBI-ProteinID:
XP_072309123
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSTARTESPVILGLSSQNGQIRGSGKPGGGGGGPQLNPMKGTLNNGDSLPATTTNAVIKP
GDDWKKNLKLPPKDTRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIP
IALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDHIQAFVIVPTRELALQVSQICIQVS
KHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVNQVQMIVLDEA
DKLLSQDFVVMMEELLSFLPKQRQILLYSATFPLSVQKFMNAHLQKPYEINLMEELTLKG
VTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKM
RQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRF
GHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSESHEEAKP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgcaagaactgagagcccagtgattttgggcttgtccagccagaatggacag
atcagaggctctgggaagccaggtggaggaggcggtggcccgcaattaaaccctatgaaa
ggcacacttaacaatggagactctctgcctgccactacaacaaatgccgttatcaaacct
ggagatgactggaagaagaatttgaaactacccccaaaggacacgagaatgaaaacatcg
gatgtcacagcaactaaaggcaatgaatttgaagactactgcctaaaacgggagctatta
atgggtatatttgaaatgggctgggagaaaccatctcctattcaggaggaaagcatcccc
attgcactgtcaggacgtgatattttagccagagccaaaaatggcacagggaagagtgga
gcctacctcattcccttacttgaacgcattgacctgaagagggaccacatacaagcgttt
gtcattgtgcccactagagaactggctctgcaagtaagccaaatatgtatccaggtcagc
aaacacatgggtggagtaaaggtgatggcaactacaggtggaacaaacctacgtgatgac
atcatgaggctcgatgaaacagtgcatgtggtgattgccactccaggacgaatcttagac
ctcatcaagaaaggagtggccaaagtcaatcaagtgcagatgatagtgctggatgaagcc
gacaaactgctttcacaggattttgtggtaatgatggaggagctccttagctttcttcct
aaacaaagacagatcttactatattctgccacctttcccctcagtgtgcagaagttcatg
aatgcacatttacagaagccctatgagatcaacctcatggaggagctcaccctgaaggga
gtgacccagtattacgcttatgtaactgaacgacaaaaggtccactgcctgaacaccttg
ttttccaggcttcagatcaaccagtctataattttctgcaattcctctcaaagagttgag
ctgcttgccaagaagatctcacagctgggctattcatgtttctacattcatgctaaaatg
agacaggagcaccgcaatcgtgttttccatgacttcagaaatggcctgtgccgtaatctt
gtgtgcactgatctcttcaccaggggaatcgacattcaggctgtgaatgttgtcattaac
tttgactttcccaagctgggagaaacatacctgcatcgtattggaagatctggacggttt
ggacaccttggtcttgcaatcaatctgattacctacgacgatcgcttcaacctgaagggc
attgaagagcagctcggaactgaaatcaaacccatccctgggatcatcgacaagagcctt
tatgtggcagaataccacagtgagagtcacgaagaggccaagccatga
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integrated database retrieval system
