Eucyclogobius newberryi (tidewater goby): 140367412
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Entry
140367412 CDS
T10929
Symbol
lsm8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03018
RNA degradation
eny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140367412 (lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
140367412 (lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140367412 (lsm8)
03041 Spliceosome [BR:
eny03041
]
140367412 (lsm8)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140367412 (lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
140367412 (lsm8)
Spliceosome [BR:
eny03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140367412 (lsm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
140367412
NCBI-ProteinID:
XP_072309991
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSTLDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgctctggagagctacataaaccgcactgtggctattgtcacttcagatgga
cgcatgattgtgggcaccctgaaaggctttgatcagaccatcaacttgatcctggatgag
agccatgagcgagtgttcagttcgagtcagggtgtggagcaggtggtcctgggactgtac
attgttcgaggcgataatgtggcagtgattggggagattgacgaagagacggactccaca
ctggatttaggaaacattagagctgaaccattgaactctgttgtgcactga
DBGET
integrated database retrieval system
