Eucyclogobius newberryi (tidewater goby): 140367509
Help
Entry
140367509 CDS
T10929
Symbol
ythdc2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eny03041
]
140367509 (ythdc2)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140367509 (ythdc2)
Spliceosome [BR:
eny03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140367509 (ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Helicase_C
HA2_C
R3H
OB_NTP_bind
HA2_N
DEAD
Ank_2
AAA_19
ATPase
Ank
nSTAND3
AAA_22
Ank_5
Ank_4
AAA_23
AAA_7
SRP54
T2SSE
AAA_16
Motif
Other DBs
NCBI-GeneID:
140367509
NCBI-ProteinID:
XP_072310124
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
MSHSRVYSKTLAKGQSSSKRGRVSSGLKEIHIDEEVKISVNLSLERFRYSDQKEMEFPSS
LSSTERAFIHRIALSLGYISKSKGKGSSRYLTIRKIDGSEKPRPTMPLILSHNTLYFIRT
LCQRFPITSKEQTDFQFSCSNSLMATEADSCEKNRASGRLKTGTPMVPRRRNPTDIDNFR
CSLPVYERHEEIVQLIRENRVILVVGETGSGKTTQIPQFLLDDCTRRGEPCRIFCTQPRR
LAAIAVAERVAAERGESLGQTVGYHIRLESRVSPTTLLTFCTSGVFLRTLMAGDSSLSTV
THVILDEVHERDGLTDFLLTKMREVLEKIPDVKLILSSAALDVDLFLQYFGFCPVLHIKG
RQFEVKELFLEDVLKVTGYKVKDMKKYNEEKQRKETKEKVLSEWCKAVESSSVEGLNMAA
SEFLQSCRTSKTGSSALCKSEENALEPWLMNEMDMCISNIFLGEDQDAFTQIFNLILYEN
VNVDYTHSDTGATALMVAAGRGCISQMQQLLSMGADMNIKASNGWSALDFAMHFNQMEAD
DLLRSSIPFGGVKQTDERARIQCADAELSPEDQELLKLYHHNFDDEYVDLDLIMSLLHHI
CSTTNEGAVLIFLPGYDEIVTLRDRIHFVDKRFSTLTERYQVFTLHSDMQTSDQKKAMKT
SPPGVRKILLSTNIAETSITINDVVFVIDSGKVKEKSYDTLSHVSMLKTVWVSKASALQR
KGRAGRCRPGICFHLFSRLRYNNMQEFQVPQLLRMPLQELCLQTKLLSPTSCPVAEFLSK
APQPPPTHAIRNAVQMLKTIDALDQREDLTDLGYHLADLPVEPHLGKMVLCAVVLKCLDP
ILTIACTLAYRDPFVLPAQGSQKKAALLCRKRFTSGAFSDHMALLRAFQAWQKARSEGWE
RSFCEKNFLSQATMEMILGMRSQLLGQLRAIGFVRARGGSDIRDVNLNSENWAVVKAALV
AGMYPNLVHINKETSLMSSHKEKKLNFHPTSMLSQTQINESTSAKGAKTLPTDWLIYDEM
SRGQRMASVRCCSLVTHVSVAIFGGCAKLPSSAMHEPASLKEGSVNDTSDSDSEELAEMK
LDDWLVFQLDTEAAGLVFELRQKWQNIFIKRIKCPTKPWTPQDDAVIRTLVSVLSAEEQS
VGLQQPTGIGQRPRAVTAEEGYQSTSKSSKNNPQSSTTDDRRCRMRGNSAHSKMLVSDEV
SLAINPLSEDPLSSSNSSCYLDSPSGSPNTFSTKGSAPTSPQIAISSIRYFILKSNSIRN
IEISQQKGIWSTTPCNESKLSKAYLENKLIVLIFSVQGSLHLQGYARMTSAINKESCQDW
GLMGLGGVFSVEWIHKESLPFQSTQHILNLWNDNKKVQISRDGQELEPQAGRQLLLMWDL
NSIN
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgtcccactctcgcgtgtactccaaaacactggcgaaaggccagagctcctcaaagagg
ggacgtgtgtccagtggcctcaaagaaattcacatcgatgaagaagtgaagatatctgtg
aacctctctttggagaggtttcgctacagtgaccagaaagagatggaatttccctcatca
ttgtcaagtacagaaagagccttcattcatcgcatagcactgtccctgggatacatatcc
aaaagcaaagggaaaggatccagtcgatatcttactatcagaaaaattgatggttcagaa
aaaccacggccaacaatgcctcttattctttcccacaacactttgtattttattcgcacc
ctgtgtcagaggtttcccatcactagtaaagaacaaactgactttcagttcagctgtagc
aacagcctgatggctactgaagctgatagttgtgaaaaaaacagagcaagtggtcgttta
aaaactggtactcccatggtgccccgaagaagaaatcccacagatattgacaatttccgg
tgctctctgccagtatacgaacggcatgaggagatcgtgcagctcatcagagaaaaccga
gtcattctggtggtgggagagactggctctggtaaaactacacagattcctcagttcctt
cttgatgattgcaccaggcgtggagagccctgcaggatcttttgcactcagcccagacgc
ctggccgccatcgctgtggccgagcgagtagcagcagagagaggagagagtttggggcaa
acagtcggttatcacatcagattggagagcagggtttctcccacaacacttttgacgttc
tgcaccagtggggtgtttctcaggaccctgatggcgggagattccagtttgtcaacagtc
acacatgttatattggatgaagtgcatgagcgagatggtttgacggatttcttgttgaca
aagatgcgggaagtgcttgagaagattcctgatgtaaaactgatcctctccagcgctgct
ctcgacgttgacctgtttcttcagtacttcggattttgccccgtcctccacatcaaagga
agacagttcgaagtgaaggaactgtttttggaagatgttctgaaggttactggttataaa
gttaaagacatgaaaaagtacaacgaggaaaaacagagaaaagaaactaaagagaaagtt
ttgagcgagtggtgtaaggctgtggagagcagttccgtggagggtctgaatatggctgcg
tctgagtttctccaaagctgcagaacctcaaagaccgggagcagcgccttgtgcaaatct
gaagagaatgcccttgagccttggttgatgaatgagatggacatgtgcatatccaacatc
ttccttggtgaagatcaagatgcatttactcagatttttaatctaattctctatgagaat
gtaaatgtggactatacccacagtgacaccggggctacagctcttatggtggcagcaggt
cgaggatgtatttcacagatgcagcagctccttagcatgggggctgatatgaatataaag
gcgtccaatggatggtctgcgttggactttgccatgcactttaaccagatggaggcagat
gatctactgcggtcatcaatcccttttggaggagtaaagcagacagatgaaagagctcgg
atacagtgtgccgatgcagagctgagcccagaggatcaggagctgctcaaactttaccac
cataattttgacgatgaatatgtggatctggacctcatcatgagcctcctgcatcacatc
tgctccacgaccaacgaaggtgctgttctgatttttctccccggatacgatgagattgtt
acactcagggatcgcattcactttgttgacaaaagattttctactctcactgaaagatat
caggtcttcaccctacattcagatatgcaaacttctgatcagaaaaaagccatgaagact
tccccgcctggtgtccgaaaaattctcctctctacaaacattgccgaaacgagcatcact
atcaatgatgttgtctttgtcattgactcaggaaaagtcaaagagaaatcctatgatact
ctgagccatgtatcaatgctgaaaacagtttgggtttctaaagctagtgcacttcaacga
aaaggaagggctggacgctgcagaccagggatctgcttccatctcttcagccgactgcgt
tacaacaacatgcaggagtttcaggttccacagctgctgcggatgcctctgcaggagttg
tgtctgcagaccaaactgctatctcccacctcttgcccagtggccgagttcttgtctaaa
gccccacagcctccaccgacacatgctattcgaaatgctgtgcagatgctgaagacaata
gacgcactggaccaacgcgaagatctcactgatttaggctaccatttggccgatttgccg
gtagagccacacctgggcaaaatggtcctttgtgccgtggtgctcaagtgcctggacccc
atcctcaccatcgcctgcactctggcctatagagacccctttgtacttcctgcccagggg
tctcagaagaaagctgctctactgtgccgcaaacggtttacctcaggcgcctttagtgac
cacatggctctgctcagggcctttcaggcttggcaaaaggctcgtagtgaaggctgggaa
cgatccttctgtgaaaagaacttcctttctcaggcgactatggaaatgattctcggaatg
agatcacagttgcttggtcagctgcgggccattggttttgttcgggcacgaggtggcagt
gacattcgagatgtaaatctgaactctgagaactgggccgtggtaaaggcagcactagtg
gctgggatgtacccaaaccttgtccatattaacaaggaaacttctctcatgtcaagccac
aaagagaaaaagcttaatttccacccaacatcaatgttaagccaaacccagataaatgag
agcacctcagccaagggggcaaagaccctccccacggactggctcatatatgatgagatg
agcagaggccaaaggatggccagtgttcgctgttgctcgctagtgacgcacgtctctgtc
gcaatatttggcggttgtgcaaaactaccaagctctgctatgcatgaacctgcctctcta
aaagaaggttctgtcaatgacacaagtgacagtgactcagaggagctggccgagatgaag
cttgatgactggcttgttttccagttggatacagaggcagcaggactggtatttgagctc
agacagaaatggcaaaatattttcatcaaacggatcaaatgtcctacaaagccctggact
ccacaagatgatgctgtcattcgcacattggtttctgtgctttcagcagaggagcagagc
gtaggcttacaacaacccacaggcataggccagcgacctcgggccgtgacagcagaagaa
ggttaccagtcaacctcaaaaagctccaagaacaaccctcagagtagcaccacagatgac
cgacggtgtaggatgcggggaaattctgcccattcaaagatgctcgtcagtgatgaggtc
tcactggccataaatcccctctctgaagaccctctgtcctccagcaactcttcttgttat
ttagacagtccctctggaagccccaacaccttctctacaaagggctcagccccaacatct
cctcagattgccatctcatccatccgttacttcatcttgaagagcaacagcattagaaat
atagagatatctcagcagaagggaatatggtccaccactccatgcaatgagtccaagctg
tccaaagcttacttggaaaataagttaatagtcttaattttctctgttcaaggatcttta
cacttacagggctacgctcgcatgacatcagccatcaacaaggagagctgccaagactgg
gggcttatgggactgggcggtgtcttcagtgttgaatggattcacaaagagagtctgcct
ttccagtctacccagcacatcctcaatctgtggaatgacaacaagaaggtccaaataagc
agagatggacaagagctggagcctcaggctggaagacagctgctgttaatgtgggatcta
aattctattaactag
DBGET
integrated database retrieval system
