Eucyclogobius newberryi (tidewater goby): 140367510
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Entry
140367510 CDS
T10929
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eny03021
]
140367510 (chd1)
03036 Chromosome and associated proteins [BR:
eny03036
]
140367510 (chd1)
Transcription machinery [BR:
eny03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140367510 (chd1)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
140367510 (chd1)
SLIK complex
140367510 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
140367510
NCBI-ProteinID:
XP_072310126
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSGSGSSSSSSSSSSQSGSSDSGSGSDSGSQS
DSDTEKTKDKIEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQQQQQQQQQKRQSSSNS
ESDEDSSSSGDSDSSSGSKTRRNSGSSDSESGSGSGSGSGSDSSAQNNSDETASDYEPSH
KTKSKKPPPKANFRNGKKSSSHKKKPQKSSSSDDDDSYNKAMSAGLRRQATVNVSYKEDE
ELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDCRIGRKGATGSSTTVYAVEDDGDPNAN
FNPNKEAGDVQYLIKWKNWAHIHNTWETEETLKMQNVKGMKKLDNFKKKEQEKKKWRKSA
SPEDIEYFNCQEELMDDLHSQYQIVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDG
ALISKKCQKCIDDYMSRNQSKNIPYRDCKVLKLRPRFVPMKKQPSYIGADGLELRDYQLD
GLNWMAHSWCKGNSCILADEMGLGKTIQTICFLNYLVHEHQLYGPFLLVVPLSTLTSWQR
EIQLWAPQMNIVVYLGDISSRNMIRTHEWMHVHTKRLKLNILLTTYEILLKDKSFLGGVG
WAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFNS
WERFEEEHGKGRDSGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYK
WILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKHPEDEFISRAEALQHLIRSSG
KLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRNRQFLFQRLDGSIKGEMRKQALD
HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVN
IYRLVTKSSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAI
LKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMD
DEELDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQTSFNANMGR
SRNRRYSGSDSDSNSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFVKSYKKFGGPLERLD
AIARDAELVDKSEHDLKRLAETVHNGCLRTLRENPCGPEKTSGGRRGKVKGPTFRISGVQ
VNAKLVISHEEELAPLHKAIPADPEERKKYIIPCHSKAAHFDIEWSKEDDSSLLIGIYEY
GYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKSQSS
ANSRKRKPRNKKNKTIKPDKSEEVKSPSSDPPSDKMSDDEEDIEEEKEVVPVKPQSRRSR
AERVVVKKEEEEEEEEEEEDEQDEEDDHSSSGEKEVKDKDIKKEIKKEKRDDSWDTKETK
EQKEKKDSKPPEPAHKQEELVEKNEVKNEARERIKKLSDTPLHITACGEPVPVFEESEEL
DQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPD
LIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENSQAMEQNTRGSNTHSSYKHADI
ERLKDNSHHDDSSRDSYSSDRNASSGRYHDGSKDRQSSEQHRKSSSGDSRKRPYPSFSNG
KDHRERDHYRPDSRDRDRDRDRDRQDRYYSDSKHRKMDDYRSRDHRLDMKDHSHLDHRSS
YRYHSDRQTERASASGPRSPRDQRSPYDSRSPLGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcgcagcgaagatgaaagtgtcagcaacagtagtggagaatcgagtaattca
gatgatgaatctggctccgggtcaggatcaggctctggctccagttccagctcctcaagc
agcagcagccaatcagggagcagcgactcaggaagtggctcggactctggcagccagtca
gactctgatacagaaaaaactaaagacaagattgaaccaccaaataagtctaacattgat
ggagctgagttctggaaatccaatcctagtatcctggcagtgcagaggtctgctatgctc
aggaaacagcagcaacagcagcagcagcaacaacagaagagacaaagctcctcaaatagc
gaatctgatgaggattcatcgagcagtggcgattcagattcatctagtggatctaaaacg
aggagaaactctggctcctctgattctgagtccggctcaggatctggaagtgggtctgga
tcagactcttcagcacaaaataacagtgatgagactgcatcagattatgagcccagtcac
aaaacaaaaagcaagaaacctccacccaaggccaattttcgtaatgggaagaaaagcagc
tctcacaaaaagaaaccccaaaagtcttcatcctctgacgatgatgatagctacaataag
gcaatgtctgctgggctgcgccggcaggccactgtcaacgttagctacaaggaggacgag
gagctgaagactgactctgatgatttggttgaagttctaggagaggatgtaccgcaacct
gaagaggacgagtttgaaacgcttgagagggtcatggactgtagaataggacgtaaagga
gcaacagggagctctacaacagtatacgctgtagaagacgatggggatccaaatgcaaat
ttcaatcccaataaagaagctggtgatgtccaatatttgatcaaatggaaaaactgggct
catatccacaatacctgggaaacagaggagacacttaagatgcaaaatgtcaagggaatg
aagaaattggacaattttaagaagaaggaacaagagaaaaagaaatggcgcaagtcagca
tcacctgaagatattgagtattttaactgccaagaagagttgatggacgacctgcactct
caatatcaaattgtagaacgcatcataggacattcaaatcagaaatcagcagcaggttac
ccagactacctctgtaagtggcagggtttgccctactctgaatgtagctgggaagacggt
gcacttatttccaaaaaatgtcagaaatgcattgatgactacatgagcaggaaccaatca
aaaaacattccctatagagactgtaaggtgctgaaactgaggcccagatttgtgcctatg
aaaaaacagccgtcttatataggagctgatggattggagctacgtgactaccagctagat
ggtttgaactggatggcacactcttggtgcaaaggcaacagctgcattcttgctgatgag
atgggccttggaaaaaccatccagaccatctgttttttgaactacttagtccatgagcac
cagctctatggacccttcctacttgtggttccactgtctactttaacttcttggcagagg
gaaatccaactctgggctcctcagatgaacattgtcgtctatctgggagacatcagcagt
agaaatatgatccggacccatgaatggatgcatgttcacaccaaaagattaaaacttaac
atccttctcacaacatatgagattctcctcaaagataagtcatttctaggaggtgttggc
tgggcttttattggagttgatgaggctcacaggctgaaaaacgatgactcccttctttat
aaaaccatgatggatttcaagtctaatcacaggctgctgatcacaggaacccccctgcag
aactccctgaaagagctctggtcactgttgcatttcatcatgccagaaaaattcaattcc
tgggagaggtttgaagaggaacatggtaaaggaagagattcaggatacgccagtctgcac
aaggagctggagccttttttactgcgcagagtcaagaaagatgtggagaagtctcttcca
gccaaagtagagcagattcttcgtgtggagatgagtgctattcaaaagcagtattacaag
tggattttgacaagaaactacaaggctttaagtaaagggacaaagggcagcacttcaggc
tttctgaacattatgatggaacttaagaagtgttgtaatcattgttatcttatcaagcac
ccagaggatgaattcatcagcagagctgaagctttacagcatcttattcgtagtagtggg
aaactggttcttctggataagctgcttgtccgattaaaggagcgaggccacagagtcctt
atattctctcagatggtacggatgctggacatcttggccgactatttgcgcaatcgtcag
tttctgtttcagcgactagatggctccatcaaaggagagatgaggaaacaagcgttggac
cacttcaatgctgaaggttctgaagatttctgcttcctcttatcaactcgtgctggagga
cttggtattaatttggcctctgctgatactgttgtcatctttgactctgactggaaccct
cagaatgacctccaagcccaggcgcgagcccacaggatcggtcagaagagacaggtaaac
atctacagactagttacaaaaagctctgtggaggaggagattatagagagggcaaagaag
aaaatggtgctcgaccaccttgttattcaaagaatggacactacaggaaagacggtgctg
cacactggctctgctccctccagttcaacacctttcaacaaggaggagttgtctgcaatc
ctaaaatttggtgctgaggaacttttcaaagaaccggaaggagaagaacaggaacctcag
gaaatggacattgatgaaattctcaagagagctgaaaccagagaaaatgacccagggccc
tcaactgttggagaggaactgttgtcacagttcaaggttgccaacttctccatgatggat
gatgaggagctagacattgactctgagcgaagccagcgcagttgggatgatattatccca
gaggagcagaggagaaggatggaggaagaggaaaggcaaaaagagctggaggagatctac
ttgctgccacgaatgagaaactgtgccaaacagacaagctttaacgctaatatgggtcgg
agcaggaacagacggtattctgggtcagatagtgactccaactctgatcgaaagaggcca
aagaaacgaggtcgtcctcgaactattccacgagaaaatatcaaaggcttcacagatgct
gagatcaggagatttgtgaagagttacaagaaatttggtggaccacttgaaagactggat
gctattgctcgagacgctgaacttgtggataaatcggagcatgacttaaaacgcttggca
gagaccgttcataacggctgtctacgaacacttcgagaaaacccatgtggaccagaaaaa
acttcaggaggcagaagagggaaggtgaaaggcccgacgttcaggatttctggtgttcag
gttaatgccaaacttgttatatcccatgaagaagagctagctccactccacaaggccatc
ccagctgatccagaggagcgaaagaaatatataattccatgccactcaaaggctgcacac
tttgacattgagtggagtaaagaagatgattctagcctcctcattggaatctatgagtat
ggatatggaagttgggagatgattaagatggaccctgacttgaatctcacacacaagctc
ttaccagacgacccagacaagaagcctcaagcaaaacaattacagacccgagcagactac
ctcataaagttactgagtaaagacctggccaaaaaggaagcccaaaaatcacaatcatct
gctaactcacgcaaaagaaaacccaggaacaaaaaaaacaaaactattaaacctgacaaa
tcagaagaagttaagagtccatcctcggacccgccttcagacaagatgtccgacgatgag
gaggacattgaggaagaaaaagaggttgttccagtgaaaccccaaagcaggcggagccga
gcggagcgagtggtggtgaaaaaagaggaggaggaggaggaggaagaggaggaggaagat
gagcaggacgaagaggacgatcattcttcttcaggcgagaaagaggtcaaagataaggac
atcaagaaagaaatcaagaaggagaaaagggatgacagctgggacacaaaagaaacaaag
gaacagaaggagaagaaggattcaaagcccccagagcctgctcacaaacaagaagagctt
gttgaaaagaatgaagttaagaatgaggccagagagcggattaagaaactctctgacaca
cccctccacataacggcgtgtggcgagcctgttccagtgtttgaggaatccgaggagttg
gaccagaagacctttagtgtgtgtaaagagagaatgcgcccagtgaaagcggcactgaag
cagctggaccggccagagaaaggactgtctgagcgtgagcagctcgaacacacgcggcag
tgcctcattaaaatcggagaccacatcacagagtgtctaaaggagtactccaaccctgac
ctcatcaaacagtggagaaagaacctttggatattcgtttccaaattcactgagtttgat
gccaggaaacttcataaactctacaagcatgccatcaagaaaagacaagagaattcacag
gcaatggagcaaaacactcgaggttcaaacacgcactcgagttataaacatgcagacatt
gaaagacttaaggacaactctcaccatgacgacagtagccgggacagctacagctcagac
agaaatgcttcttctggacgttatcacgacggcagcaaagacaggcaaagttcagagcaa
catcgaaagtcctcatcaggggactccaggaaaagaccgtatccatccttcagcaatggc
aaagaccaccgagaaagagaccactacagaccggacagcagggaccgggacagggaccga
gaccgggacagacaagacaggtattatagtgacagtaaacacaggaagatggatgactac
cgttcaagagaccatcgactggacatgaaggatcattcccacctggaccaccgctcctcg
taccgataccactcagaccgacagacagagcgggcttcagccagcgggccacgctcccca
cgggaccagcgctcaccctacgactcccgctcacccctgggacaccgctcacctttcgat
tactcttcagaccacaaaagcacaccagaacaaatctggagcagccgcaaaacataa
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integrated database retrieval system
