Eucyclogobius newberryi (tidewater goby): 140367708
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Entry
140367708 CDS
T10929
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eny03009
]
140367708 (ddx55)
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140367708 (ddx55)
Ribosome biogenesis [BR:
eny03009
]
Eukaryotic type
Pre-60S particles
Helicases
140367708 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
SBF_like
CTT_SPB4
Cas3-like_C_2
YbjM
POP1_C
Motif
Other DBs
NCBI-GeneID:
140367708
NCBI-ProteinID:
XP_072310404
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MANVTDGTWDSLSVKLDDNILQTLKELGFTHMTPVQAACIPLFLGNKDVAAEAVTGSGKT
LAFVIPMIALLLKREEKLKKMQVGALVITPTRELALQISEVVETFLKKFSQFTQILLIGG
TNPIEDVEKLKTQGANIVIATPGRLEDMFRRKSEGLDMASYVKSLDVLVLDEADRLLDMG
FERSLNTILSYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRIAVKEKGVADSHTQKTPS
RLANFYTVCRPEDKFNNLVAFLRQHKHEKNLVFFSTCACVEYFSRALATLIKKVDVQCIH
GKMKNKRNKIFANFRALKSGILVCTDVMARGIDIPDVNWVIQCDPPSNACAFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQEMPPINDIVDVLPKMKAMALADRVMFEK
SMRAFVSHVQSYSKHECSLIFRIKDLDFASLAHGFALLCLPKMPELRGKTFPDFIKTDID
IDTIKFKDKNREKLRQKMMEERRNQLKSYTGKKGFVKPQAWSKQKNKKERRKNRAAKRKH
EGSDVDEEMNELLTDTRLLKKLMKRQITEDDFEKQITGGGSQSKGQTAKASGRACEED
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtaacggatggaacgtgggatagtttatctgtaaaacttgatgacaacatt
ttacagacacttaaagaactcggatttacacatatgactcctgtacaggctgcgtgtatt
cccctgttcttaggaaacaaagatgtagctgctgaagcggtgactggaagtggaaaaaca
cttgcttttgtcattcctatgatagcgctgctgctaaagcgtgaagaaaagctgaagaag
atgcaagttggtgctcttgtcatcactcccacaagagaattggcacttcaaatcagtgaa
gtggtggagacattcctcaagaagttttcccagtttacgcagatcttgctcatcggtggt
actaaccccatagaagatgtcgagaaattgaaaacacaaggagcaaacattgtgattgca
actccggggcgtctggaggacatgtttaggagaaagagtgaagggcttgacatggcaagc
tacgtcaaaagtcttgatgtgcttgtccttgatgaggctgatcggctgctggacatggga
tttgagaggagtctgaacactattctcagctatttacccaaacagcggcgcactggcttg
ttttcagccactcagacacaggagctggaaaagctggtgagagcaggtcttagaaaccct
gtgcgtatcgctgttaaggaaaagggtgtagcagactcgcacactcagaaaactccctca
agacttgccaacttctacactgtctgtaggccagaagataaattcaataatctggtggct
ttcctcaggcaacacaaacatgaaaaaaatctggtattctttagcacttgtgcctgtgtg
gaatacttcagtcgtgcattagcgactcttattaaaaaggtcgatgtacagtgcatccat
ggaaaaatgaaaaacaaacgtaataaaatctttgccaactttcgggctttgaaaagtggg
atcctggtctgtacagacgtcatggcaagaggaattgacatcccagatgtgaactgggtg
attcagtgtgacccacccagcaatgcctgtgcttttgtacatcgttgtggacgtacagca
cggattggaaaccagggcaatgctctcgtctttctcctaccaatggaagagtcctatgtc
aattttctatccatcaaccagaaatgtcccttacaagagatgcctcctataaatgatatt
gttgatgtgcttccaaaaatgaaagccatggctttagcagatcgtgtcatgtttgaaaaa
agcatgagggcatttgtttctcatgttcagtcgtattccaagcacgaatgcagtcttatc
ttcagaattaaagatctggactttgcatccttagctcatgggtttgcacttctttgcttg
cccaagatgccagagttgagaggcaaaacctttcctgactttattaaaacagacatagat
attgacaccatcaagttcaaagataagaatagagaaaaactgagacagaagatgatggaa
gagcgaagaaaccaattaaagtcatatacaggcaaaaaaggctttgttaaaccccaagca
tggtcaaaacaaaagaacaagaaggagcgccggaaaaatagggcagccaaaaggaagcat
gagggctccgacgttgatgaagaaatgaatgaacttttaactgacacacgtctcttgaaa
aaactgatgaaaagacaaatcactgaggatgactttgagaagcagataactggtggtggc
tcgcaatcgaaaggccaaactgcaaaggccagtggcagagcgtgtgaagaggactaa
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